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High genetic diversity of Sappinia-like strains (Amoebozoa, Thecamoebidae) revealed by SSU rRNA investigations

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Abstract

Sappinia diploidea is known as a free-living amoeba of worldwide distribution and has also been reported as causative agent of a brain infection in an immunocompetent young man. In the current study, we were able to isolate eight strains of S. diploidea-like amoebae identified by light microscopy from different habitats. Cultures of all strains were established successfully for molecular characterization. The small subunit ribosomal RNA genes of all strains were sequenced and compared to one another, to the neotype of S. diploidea, and to strains of Sappinia pedata, the only other Sappinia species known to date, from GenBank by multiple sequence alignment and cluster analysis. Altogether, the phylogenetic position of the genus Sappinia within the Thecamoebidae was corroborated; however, it was shown that the genus splits into several well-separated clusters making the establishment of new species within this genus inevitable. Furthermore, two of the S. diploidea-like strains were actually more closely related to S. pedata than to S. diploidea, although the diagnostically relevant standing form which seems to be characteristic for S. pedata was not observed in either of the two strains.

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Fig. 1

Notes

  1. The results of this phylogenetic analysis have been presented partially by us at the annual meeting of the German Society for Protozoology at Salzburg in 2007.

References

  • Brown MW, Spiegel FW, Silberman JD (2007) Amoeba at attention: phylogenetic affinity of Sappinia pedata. J Eukaryot Microbiol 54:511–519

    CAS  PubMed  Google Scholar 

  • Dangeard PA (1896) Contribution à l’étude des Acrasiées. Botaniste 5:1–20

    Google Scholar 

  • Gelman BB, Rauf SJ, Nader R, Popov V, Borkowski J, Chaljub G, Nauta HW, Visvesvara GS (2001) Amoebic encephalitis due to Sappinia diploidea. J Am Med Assoc 285:2450–2451

    Article  CAS  Google Scholar 

  • Gelman BB, Popov V, Chaljub G, Nader R, Rauf SJ, Nauta HW, Visvesvara GS (2003) Neuropathological and ultrastructural features of amoebic encephalitis caused by Sappinia diploidea. J Neuropathol Exp Neurol 62:990–998

    PubMed  Google Scholar 

  • Goodfellow LP, Belcher JH, Page FC (1974) A light- and electron-microscopical study of Sappinia diploidea, a sexual amoeba. Protistologica 2:207–216

    Google Scholar 

  • Guindon S, Lethiec F, Duroux P, Gascuel O (2005) PHYML online—a web server for fast maximum likelihood-based phylogenetic inference. Nucleic Acids Res 33:W557–W559

    Article  CAS  PubMed  Google Scholar 

  • Hall TA (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Res Symp Ser 41:95–98

    CAS  Google Scholar 

  • Hartmann M, Nägler K (1908) Copulation bei Amoeba diploidea n. sp. mit Selbständigbleiben der Gametenkerne während des ganzen Lebenszyklus. Sitzungsber d Ges Naturforsch Fr Berlin 5:112–125

    Google Scholar 

  • Huelsenbeck JP, Ronquist F, Nielsen R, Bollback JP (2001) Bayesian inference of phylogeny and its impact on evolutionary biology. Science 294:2310–2314

    Article  CAS  PubMed  Google Scholar 

  • Kumar S, Tamura K, Nei N (2004) MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 5:150–163

    Article  CAS  PubMed  Google Scholar 

  • Lanave C, Preparata G, Saccone C, Serio G (1984) A new method for calculating evolutionary substitution rates. J Mol Evol 20:86–93

    Article  CAS  PubMed  Google Scholar 

  • Levine N (1961) Protozoan parasites of domestic animals and of man. Burgess, Minneapolis, Minnesota

    Google Scholar 

  • Michel R, Wylezich C, Hauröder B, Smirnov AV (2006) Phylogenetic position and notes on the ultrastructure of Sappinia diploidea (Thecamoebodae). Protistology 4:319–325

    CAS  Google Scholar 

  • Nägler K (1909) Entwicklungsgeschichtliche Studien über Amöben. Arch Protistenkd 15:1–53

    Google Scholar 

  • Noble GA (1958) Coprozoic protozoa from Wyoming animals. J Protozool 5:9–74

    Google Scholar 

  • Page FC (1988) A new key to freshwater and soil Gymnamoebia. Freshwater Biol Assoc, Ambleside

    Google Scholar 

  • Page FC, Siemensma FJ (1991) Nackte Rhizopoda und Heliozoa. Gustav Fischer, Stuttgart, New York

    Google Scholar 

  • Qvarnstrom Y, da Silva AJ, Schuster FL, Gelman BB, Visvesvara GS (2009) Molecular confirmation of Sappinia pedata as a causative agent of amoebic encephalitis. J Infect Dis 199:1139–1142

    Article  CAS  PubMed  Google Scholar 

  • Scheckenbach F, Wylezich C, Weitere M, Hausmann K, Arndt H (2005) Molecular identity of strains of heterotrophic flagellates isolated from surface waters and deep-sea sediments of the South Atlantic based on SSU rDNA. Aquat Microb Ecol 38:239–247

    Article  Google Scholar 

  • Smirnov A, Nassonova E, Chao E, Cavalier-Smith T (2007) Phylogeny, evolution and taxonomy of vannellid amoebae. Protist 158:295–325

    Article  CAS  PubMed  Google Scholar 

  • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 24:4876–4882

    Article  Google Scholar 

  • Visvesvara GS, Moura H, Schuster FL (2007) Pathogenic and opportunistic free-living amoebae: Acanthamoeba spp., Balamuthia mandrillaris, Naegleria fowleri, and Sappinia diploidea. FEMS Immunol Med Microbiol 50:1–26

    Article  CAS  PubMed  Google Scholar 

  • Walochnik J, Michel R, Aspöck H (2004) A molecular biological approach to the phylogenetic position of the genus Hyperamoeba. J Eukaryot Microbiol 51:433–444

    Article  CAS  PubMed  Google Scholar 

  • Walochnik J, Wylezich C, Michel R (2007) Molecular phylogeny of Sappinia diploidea. Annual meeting of the German Association of Protozoology at Salzburg, Austria

  • Wylezich C, Meisterfeld M, Meisterfeld S, Schlegel M (2002) Phylogenetic analyses of small subunit ribosomal RNA coding regions reveal a monophyletic lineage of euglyphid testate amoebae (order Euglyphida). J Eukaryot Microbiol 49:108–118

    Article  CAS  PubMed  Google Scholar 

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Acknowledgment

We thank Matthias Horn (University of Vienna) for the culture of a S. diploidea-like amoeba (strain Noaf) isolated in Tunisia.

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Correspondence to Claudia Wylezich.

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Claudia Wylezich and Julia Walochnik have contributed equally to this work.

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Wylezich, C., Walochnik, J. & Michel, R. High genetic diversity of Sappinia-like strains (Amoebozoa, Thecamoebidae) revealed by SSU rRNA investigations. Parasitol Res 105, 869–873 (2009). https://doi.org/10.1007/s00436-009-1482-1

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