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Hypermethylation of ITGA4, TFPI2 and VIMENTIN promoters is increased in inflamed colon tissue: putative risk markers for colitis-associated cancer

  • Original Article – Cancer Research
  • Published:
Journal of Cancer Research and Clinical Oncology Aims and scope Submit manuscript

Abstract

Purpose

Epigenetic silencing of tumor suppressor genes is involved in early transforming events and has a high impact on colorectal carcinogenesis. Likewise, colon cancers that derive from chronically inflamed bowel diseases frequently exhibit epigenetic changes. But there is little data about epigenetic aberrations causing colorectal cancer in chronically inflamed tissue. The aim of the present study was to evaluate the aberrant gain of methylation in the gene promoters of VIM, TFPI2 and ITGA4 as putative early markers in the development from inflamed tissue via precancerous lesions toward colorectal cancer.

Methods

Initial screening of different cancer cell lines by using methylation-specific PCR revealed a putative colon cancer-specific methylation pattern. Additionally, a demethylation assay was performed to investigate the methylation-dependent gene silencing of ITGA4. The candidate markers were analyzed in colonic tissue specimens from patients with colorectal cancer (n = 15), adenomas (n = 76), serrated lesions (n = 13), chronic inflammation (n = 10) and normal mucosal samples (n = 9).

Results

A high methylation frequency of VIM (55.6 %) was observed in normal colon tissue, whereas ITGA4 and TFPI2 were completely unmethylated in controls. A significant gain of methylation frequency with progression of disease as well as an age-dependent effect was detectable for TFPI2. ITGA4 methylation frequency was high in precancerous and cancerous tissues as well as in inflammatory bowel diseases (IBD).

Conclusion

The already established methylation marker VIM does not permit a specific and sensitive discrimination of healthy and neoplastic tissue. The methylation markers ITGA4 and TFPI2 seem to be suitable risk markers for inflammation-associated colon cancer.

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References

  • Ahlquist DA (2010) Molecular detection of colorectal neoplasia. Gastroenterology 138:2127–2139

    Article  CAS  PubMed  Google Scholar 

  • Ahlquist T et al (2008) Gene methylation profiles of normal mucosa, and benign and malignant colorectal tumors identify early onset markers. Mol Cancer 7:94

    Article  PubMed Central  PubMed  Google Scholar 

  • Ausch C et al (2009) Comparative analysis of PCR-based biomarker assay methods for colorectal polyp detection from fecal DNA. Clin Chem 55:1559–1563

    Article  CAS  PubMed  Google Scholar 

  • Baek YH, Chang E, Kim YJ, Kim BK, Sohn JH, Park DI (2009) Stool methylation-specific polymerase chain reaction assay for the detection of colorectal neoplasia in Korean patients. Dis Colon Rectum 52:1452–1459 (discussion 1459–1463)

    Article  PubMed  Google Scholar 

  • Basseri RJ et al (2012) Colorectal cancer screening and surveillance in Crohn’s colitis. J Crohns Colitis 6:824–829

    Article  PubMed  Google Scholar 

  • Bernstein CN, Blanchard JF, Kliewer E, Wajda A (2001) Cancer risk in patients with inflammatory bowel disease: a population-based study. Cancer 91:854–862

    Article  CAS  PubMed  Google Scholar 

  • Bretthauer M (2010) Evidence for colorectal cancer screening. Best Pract Res Clin Gastroenterol 24:417–425

    Article  PubMed  Google Scholar 

  • Carmona FJ et al (2013) DNA methylation biomarkers for noninvasive diagnosis of colorectal cancer. Cancer Prev Res (Phila) 6:656–665

    Article  CAS  Google Scholar 

  • Center MM, Jemal A, Ward E (2009) International trends in colorectal cancer incidence rates. Cancer Epidemiol Biomark Prev 18:1688–1694

    Article  Google Scholar 

  • Chen WD et al (2005) Detection in fecal DNA of colon cancer-specific methylation of the nonexpressed vimentin gene. J Natl Cancer Inst 97:1124–1132

    Article  CAS  PubMed  Google Scholar 

  • Cheon DJ, Orsulic S (2014) Ten-gene biomarker panel: a new hope for ovarian cancer? Biomark Med 8:523–526

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Eaden JA, Abrams KR, Mayberry JF (2001) The risk of colorectal cancer in ulcerative colitis: a meta-analysis. Gut 48:526–535

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Feagins LA, Souza RF, Spechler SJ (2009) Carcinogenesis in IBD: potential targets for the prevention of colorectal cancer. Nat Rev Gastroenterol Hepatol 6:297–305

    Article  CAS  PubMed  Google Scholar 

  • Ferlay J, Shin HR, Bray F, Forman D, Mathers C, Parkin DM (2010) Estimates of worldwide burden of cancer in 2008: GLOBOCAN 2008. Int J Cancer 127:2893–2917

    Article  CAS  PubMed  Google Scholar 

  • Foran E, Garrity-Park MM, Mureau C, Newell J, Smyrk TC, Limburg PJ, Egan LJ (2010) Upregulation of DNA methyltransferase-mediated gene silencing, anchorage-independent growth, and migration of colon cancer cells by interleukin-6. Mol Cancer Res 8:471–481

    Article  CAS  PubMed  Google Scholar 

  • Fujii S et al (2005) Methylation of the oestrogen receptor gene in non-neoplastic epithelium as a marker of colorectal neoplasia risk in longstanding and extensive ulcerative colitis. Gut 54:1287–1292

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Garrity-Park MM, Loftus EV Jr, Sandborn WJ, Bryant SC, Smyrk TC (2010) Methylation status of genes in non-neoplastic mucosa from patients with ulcerative colitis-associated colorectal cancer. Am J Gastroenterol 105:1610–1619

    Article  CAS  PubMed  Google Scholar 

  • Gerecke C, Mascher C, Gottschalk U, Kleuser B, Scholtka B (2013) Ultrasensitive detection of unknown colon cancer-initiating mutations using the example of the Adenomatous polyposis coli gene. Cancer Prev Res (Phila) 6:898–907

    Article  CAS  Google Scholar 

  • Glockner SC et al (2009) Methylation of TFPI2 in stool DNA: a potential novel biomarker for the detection of colorectal cancer. Cancer Res 69:4691–4699

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Grivennikov SI, Greten FR, Karin M (2010) Immunity, inflammation, and cancer. Cell 140:883–899

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Hahn MA et al (2008) Methylation of polycomb target genes in intestinal cancer is mediated by inflammation. Cancer Res 68:10280–10289

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Hartnett L, Egan LJ (2012) Inflammation, DNA methylation and colitis-associated cancer. Carcinogenesis 33:723–731

    Article  CAS  PubMed  Google Scholar 

  • Heller G et al (2008) Genome-wide transcriptional response to 5-aza-2′-deoxycytidine and trichostatin a in multiple myeloma cells. Cancer Res 68:44–54

    Article  CAS  PubMed  Google Scholar 

  • Hol L et al (2010) Screening for colorectal cancer: randomised trial comparing guaiac-based and immunochemical faecal occult blood testing and flexible sigmoidoscopy. Gut 59:62–68

    Article  CAS  PubMed  Google Scholar 

  • Itzkowitz SH, Yio X (2004) Inflammation and cancer IV. Colorectal cancer in inflammatory bowel disease: the role of inflammation. Am J Physiol Gastrointest Liver Physiol 287:G7–17

    Article  CAS  PubMed  Google Scholar 

  • Itzkowitz SH et al (2007) Improved fecal DNA test for colorectal cancer screening. Clin Gastroenterol Hepatol 5:111–117

    Article  CAS  PubMed  Google Scholar 

  • Jemal A, Siegel R, Xu J, Ward E (2010) Cancer statistics, 2010. CA Cancer J Clin 60:277–300

    Article  PubMed  Google Scholar 

  • Jones P, Baylin S (2007) The epigenomics of cancer. Cell 128:683–692

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Kominsky DJ et al (2011) An endogenously anti-inflammatory role for methylation in mucosal inflammation identified through metabolite profiling. J Immunol 186:6505–6514

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Lao VV, Grady WM (2011) Epigenetics and colorectal cancer. Nat Rev Gastroenterol Hepatol 8:686–700

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Mazzoccoli G et al (2012) ARNTL2 and SERPINE1: potential biomarkers for tumor aggressiveness in colorectal cancer. J Cancer Res Clin Oncol 138:501–511

    Article  CAS  PubMed  Google Scholar 

  • Mikami T et al (2007) Low frequency of promoter methylation of O6-methylguanine DNA methyltransferase and hMLH1 in ulcerative colitis-associated tumors: comparison with sporadic colonic tumors. Am J Clin Pathol 127:366–373

    Article  CAS  PubMed  Google Scholar 

  • Nakajima T et al (2006) Higher methylation levels in gastric mucosae significantly correlate with higher risk of gastric cancers. Cancer Epidemiol Biomark Prev 15:2317–2321

    Article  CAS  Google Scholar 

  • Nibbe RK, Chance MR (2009) Approaches to biomarkers in human colorectal cancer: looking back, to go forward. Biomark Med 3:385–396

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Niwa T et al (2010) Inflammatory processes triggered by Helicobacter pylori infection cause aberrant DNA methylation in gastric epithelial cells. Cancer Res 70:1430–1440

    Article  CAS  PubMed  Google Scholar 

  • Payne SR (2010) From discovery to the clinic: the novel DNA methylation biomarker (m)SEPT9 for the detection of colorectal cancer in blood. Epigenomics 2:575–585

    Article  CAS  PubMed  Google Scholar 

  • Rabeneck L, Paszat LF, Saskin R, Stukel TA (2010) Association between colonoscopy rates and colorectal cancer mortality. Am J Gastroenterol 105:1627–1632

    Article  PubMed  Google Scholar 

  • Samowitz WS, Slattery ML, Sweeney C, Herrick J, Wolff RK, Albertsen H (2007) APC mutations and other genetic and epigenetic changes in colon cancer. Mol Cancer Res 5:165–170

    Article  CAS  PubMed  Google Scholar 

  • Schoen RE et al (2012) Colorectal-cancer incidence and mortality with screening flexible sigmoidoscopy. N Engl J Med 366:2345–2357

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Valinluck V, Sowers LC (2007) Inflammation-mediated cytosine damage: a mechanistic link between inflammation and the epigenetic alterations in human cancers. Cancer Res 67:5583–5586

    Article  CAS  PubMed  Google Scholar 

  • Xia D, Wang D, Kim SH, Katoh H, DuBois RN (2012) Prostaglandin E2 promotes intestinal tumor growth via DNA methylation. Nat Med 18:224–226

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Zauber AG et al (2012) Colonoscopic polypectomy and long-term prevention of colorectal-cancer deaths. N Engl J Med 366:687–696

    Article  PubMed Central  CAS  PubMed  Google Scholar 

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Acknowledgments

This work was supported by the Foundation for Pathobiochemistry and Molecular Diagnostics, German Society for Clinical Chemistry and Laboratory Medicine e. V. (DGKL; Bonn, Germany) (grant to B.S.). Funding was restricted to personnel and non-personnel costs. M. Otto, R. Brigelius-Flohé and the Nestlé Ltd. Research Centre are acknowledged for providing cell lines LS174T, Caco-2 and HCEC, respectively. Thanks are given to Monika Haseloff for technical assistance.

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Correspondence to Burkhard Kleuser.

Additional information

Christian Gerecke and Bettina Scholtka have contributed equally to this work.

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Gerecke, C., Scholtka, B., Löwenstein, Y. et al. Hypermethylation of ITGA4, TFPI2 and VIMENTIN promoters is increased in inflamed colon tissue: putative risk markers for colitis-associated cancer. J Cancer Res Clin Oncol 141, 2097–2107 (2015). https://doi.org/10.1007/s00432-015-1972-8

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  • DOI: https://doi.org/10.1007/s00432-015-1972-8

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