Abstract
Chromosomal rearrangements may complicate construction of Arabidopsis with multiple TDNA-insertion mutations. Here, crossing two lines homozygous for insertions in AtREV3 and AtPOLH (chromosomes I and V, respectively) and selfing F1 plants yielded non-Mendelian F2 genotype distributions: frequencies of +/++/+ and 1/1 2/2 progeny were only 0.42 and 0.25%. However, the normal development and fertility of double mutants showed AtPOLH-1 and AtREV3-2 gametes and 1/1 2/2 embryos to be fully viable. F2 distributions could be quantitatively predicted by assuming that F1 selfing produced inviable (1,2) and (+,+) gametophytes 86% of the time. Some defect intrinsic to the F1 selfing process itself thus appeared responsible. In selfing AtREV3 +/2 single mutants, imaging of ovules and pollen showed arrest or abortion, respectively, of half of gametophytes; however, gametogenesis was normal in AtREV3 2/2 homozygotes. These findings, taken together, suggested that T-DNA insertion at AtREV3 on chromosome I had caused a reciprocal I–V translocation. Spreads of meiosis I chromosomes in selfing AtREV3 +/2 heterozygotes revealed the predicted cruciform four-chromosome structures, which fluorescence in situ hybridization showed to invariably include both translocated and normal chromosomes I and V. Sequencing of the two junctions of T-DNA with AtREV3 DNA and the two with gene At5g59920 suggested translocation via homologous recombination between independent inverted-repeat T-DNA insertions. Thus, when crosses between TDNA-insertion mutants yield anomalous progeny distributions, TDNA-linked translocations should be considered.
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Abbreviations
- UV-B:
-
Ultraviolet radiation B
- T-DNA:
-
Transferred DNA of the tumor-inducing plasmid
- wt:
-
Wild-type
- TAIR:
-
Arabidopsis information resource
- FISH:
-
Fluorescence in situ hybridization
- RB:
-
T-DNA right border
- LB:
-
T-DNA left border
- CEN:
-
Centromere
- LETEL:
-
Left telomere
- RETEL:
-
Right telomere
References
Campell BR, Song Y, Posch TE, Cullis CA, Town CD (1992) Sequence and organization of 5S ribosomal RNA-encoding genes of Arabidopsis thaliana. Gene 112:225–228
Castle LA, Errampalli D, Atherton TL, Franzmann LH, Yoon ES, Meinke DW (1993) Genetic and molecular characterization of embryonic mutants identified following seed transformation in Arabidopsis. Mol Gen Genet 241:504–514
Christensen CA, Gorsich SW, Brown RH, Jones LG, Brown J, Shaw JM, Drews GN (2002) Mitochondrial GFA2 is required for synergid cell death in Arabidopsis. Plant Cell 14:2215–2232
Curtis MJ, Hays JB (2007) Tolerance of dividing cells to replication stress in UVB-irradiated Arabidopsis roots: requirements for DNA translesion polymerases eta and zeta. DNA Repair (Amst) 6:1341–1358
Drews GN, Yadegari R (2002) Development and function of the angiosperm female gametophyte. Annu Rev Genet 36:99–124
Drews GN, Lee D, Christensen CA (1998) Genetic analysis of female gametophyte development and function. Plant Cell 10:5–18
Forsbach A, Schubert D, Lechtenberg B, Gils M, Schmidt R (2003) A comprehensive characterization of single-copy T-DNA insertions in the Arabidopsis thaliana genome. Plant Mol Biol 52:161–176
Gerlach WL, Bedbrook JR (1979) Cloning and characterization of ribosomal RNA genes from wheat and barley. Nucleic Acids Res 7:1869–1885
Grelon M, Vezon D, Gendrot G, Pelletier G (2001) AtSPO11–1 is necessary for efficient meiotic recombination in plants. EMBO J 20:589–600
Henry IM, Dilkes BP, Comai L (2007) Genetic basis for dosage sensitivity in Arabidopsis thaliana. PLoS Genet 3:e70
Honys D, Twell D (2004) Transcriptome analysis of haploid male gametophyte development in Arabidopsis. Genome Biol 5:R85
Humann J, Andrews S, Ream W (2006) VirE1-mediated resistance to crown gall in transgenic Arabidopsis thaliana. Phytopathology 96:105–110
Jorgensen R, Snyder C, Jones JDG (1986) T-DNA is organized predominantly in inverted repeat structures in plants transformed with Agrobacterium tumefaciens C58 derivatives. Mol Gen Genet 207:471–477
Kononov ME, Bassuner B, Gelvin SB (1997) Integration of T-DNA binary vector ‘backbone’ sequences into the tobacco genome: evidence for multiple complex patterns of integration. Plant J 11:945–957
Lafleuriel J, Degroote F, Depeiges A, Picard G (2004) A reciprocal translocation, induced by a canonical integration of a single T-DNA, interrupts the HMG-I/Y Arabidopsis thaliana gene. Plant Physiol Biochem 42:171–179
Laufs P, Autran D, Traas J (1999) A chromosomal paracentric inversion associated with T-DNA integration in Arabidopsis. Plant J 18:131–139
Lee H, Humann JL, Pitrak JS, Cuperus JT, Parks TD, Whistler CA, Mok MC, Ream LW (2003) Translation start sequences affect efficiency of silencing of Agrobacterium tumefaciens T-DNA oncogenes. Plant Physiol 133:966–977
Lysak M, Fransz P, Schubert I (2006) Cytogenetic analyses of Arabidopsis. Methods Mol Biol 323:173–186
Miranda A, Janssen G, Hodges L, Peralta EG, Ream W (1992) Agrobacterium tumefaciens transfers extremely long T-DNAs by a unidirectional mechanism. J Bacteriol 174:2288–2297
Nacry P, Camilleri C, Courtial B, Caboche M, Bouchez D (1998) Major chromosomal rearrangements induced by T-DNA transformation in Arabidopsis. Genetics 149:641–650
O’Malley RC, Alonso JM, Kim CJ, Leisse TJ, Ecker JR (2007) An adapter ligation-mediated PCR method for high-throughput mapping of T-DNA inserts in the Arabidopsis genome. Nat Protoc 2:2910–2917
Pagnussat GC, Yu HJ, Ngo QA, Rajani S, Mayalagu S, Johnson CS, Capron A, Xie LF, Ye D, Sundaresan V (2005) Genetic and molecular identification of genes required for female gametophyte development and function in Arabidopsis. Development 132:603–614
Patterson EB (1978) Properties and uses of duplicate-deficient chromosome complements in maize. In: Walden DB (ed) Maize breeding and genetics. Wiley-Interscience, New York, pp 693–710
Ray SM, Park SS, Ray A (1997) Pollen tube guidance by the female gametophyte. Development 124:2489–2498
Redei GP (1965) Non-Mendelian megagametogenesis in Arabidopsis. Genetics 51:857–872
Rine J (2005) Cell biology. Twists in the tale of the aging yeast. Science 310:1124–1125
Sakamoto A, Lan VT, Hase Y, Shikazono N, Matsunaga T, Tanaka A (2003) Disruption of the AtREV3 gene causes hypersensitivity to ultraviolet B light and gamma-rays in Arabidopsis: implication of the presence of a translesion synthesis mechanism in plants. Plant Cell 15(9):2042–2057
Schneitz K, Hulskamp M, Pruitt RE (1995) Wild-type ovule development in Arabidopsis thaliana: a light microscope study of cleared whole-mount tissue. Plant J 7:731–749
Siddiqi I, Ganesh G, Grossniklaus U, Subbiah V (2000) The dyad gene is required for progression through female meiosis in Arabidopsis. Development 127:197–207
Tax FE, Vernon DM (2001) T-DNA-associated duplication/translocations in Arabidopsis. Implications for mutant analysis and functional genomics. Plant Physiol 126:1527–1538
Viss WJ, Pitrak JS, Humann J, Cook M, Driver J, Ream W (2003) Crown-gall-resistant transgenic apple trees that silence Agrobacterium tumefaciens oncogenes. Mol Breed 12:283–295
Acknowledgments
This work was supported by National Science Foundation grant MCB 03455001 to J.B.H. We thank Dr. Jennifer Lorang and Buck Wilcox for critical reading of the manuscript, and Dr. Walter Ream for helpful general information about T-DNA insertions.
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425_2008_868_MOESM4_ESM.doc
Supplementary Table 1. Non-Mendelian segregation in F3 progeny of selfed AtPOLH +/1 AtREV3 +/2 F2 heterozygotes (DOC 27 kb)
425_2008_868_MOESM5_ESM.doc
Supplementary Table 2. Summed allele combinations observed at AtREV3 or AtPOLH loci among all progeny of a selfed F2 AtPOLH +/1 AtREV3 +/2 double heterozygote (DOC 25 kb)
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Curtis, M.J., Belcram, K., Bollmann, S.R. et al. Reciprocal chromosome translocation associated with TDNA-insertion mutation in Arabidopsis: genetic and cytological analyses of consequences for gametophyte development and for construction of doubly mutant lines. Planta 229, 731–745 (2009). https://doi.org/10.1007/s00425-008-0868-0
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DOI: https://doi.org/10.1007/s00425-008-0868-0