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Molecular analysis of the 5′-upstream region of a gibberellin-inducible cytosolic glutamine synthetase gene (GS1b) expressed in pine vascular tissue

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Abstract

The promoter region of the cytosolic glutamine synthetase GS1b gene was isolated from the conifer Pinus sylvestris L. (Scots pine). The 1,171-bp stretch of sequence lying immediately upstream of the transcriptional start site was sufficient to drive the expression of a reporter gene in a manner consistent with the expression pattern of the native GS1b gene. Computer analysis of putative cis elements in this promoter region revealed the presence of an AT box, an AC motif similar to those found in other genes expressed in the vascular tissue, and a gibberellin (GA)-responsive element. Consistent with the latter finding, GS1b gene expression was induced by exogenously supplied gibberellic acid (GA3) in germinating pine embryos and pine seedlings. In order to examine if the putative GA-response element found in the GS1b promoter could function in the regulation of GS1b expression, a series of deletions of the upstream gene region were fused to the uidA reporter gene, and transient expression analyzed either in untreated or in GA3-treated pine (Pinus pinaster Ait.) protoplasts. Deletion analysis revealed that sequences containing the GA-responsive element, located between −1005 and −724 bp were essential for the increased promoter activity observed in response to GA3. Furthermore, electrophoretic-mobility-shift assays showed that pine nuclear proteins bind to a 22-bp sequence that contains the GA-response element, located between −768 and −747 bp relative to the transcription start site.

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Abbreviations

ABA :

Abscisic acid

BAP :

N6-Benzylaminopurine

DAI :

Days after imbibition

GA :

Gibberellin

GA 3 :

Gibberellic acid

GS :

Glutamine synthetase

GUS :

β-Glucuronidase

IAA :

Indole-3-acetic acid

TDZ :

Thiadiazuron

References

  • Avila C, García-Gutierrez A, Crespillo R, Cánovas FM (1998) Effects of phosphinotricin treatment on glutamine synthetase isoforms in Scots pine seedlings. Plant Physiol Biochem 36:857–863

    Article  CAS  Google Scholar 

  • Avila C, Muñoz-Chapuli R, Plomion C, Frigerio JM, Cánovas FM (2000) Two genes encoding distinct cytosolic glutamine synthetases are closely linked in the pine genome. FEBS Lett 477:237–243

    Article  PubMed  Google Scholar 

  • Avila C, Suárez M-F, Gómez-Maldonado J, Cánovas FM (2001a) Spatial and temporal expression of two cytosolic glutamine synthetase genes in Scots pine: functional implications on nitrogen metabolism during early stages of conifer development. Plant J 25:93–102

    CAS  PubMed  Google Scholar 

  • Avila C, Cantón FR, Barnestein P, Suárez M-F, Marraccini P, Rey M, Humara JM, Ordás R, Cánovas FM (2001b) The promoter of a cytosolic glutamine synthetase gene from the conifer Pinus sylvestris is active in cotyledons of germinating seeds and light-regulated in transgenic Arabidopsis thaliana. Physiol Plant 112:388–396

    Article  CAS  PubMed  Google Scholar 

  • Bedell J-P, Chalot M, Brun A, Botton B (1995) Purification and properties of glutamine synthetase from Douglas-fir roots. Physiol Plant 94:597–604

    Article  CAS  Google Scholar 

  • Bewley JD (1997) Seed germination and dormancy. Plant Cell 9:1055–1066

    CAS  Google Scholar 

  • Bradford MM (1976) A rapid and sensitive method for the quantification of microgram quantities of proteins utilizing the principle of protein–dye binding. Anal Biochem 72:248–254

    Article  CAS  PubMed  Google Scholar 

  • Cánovas FM, Cantón FR, Gallardo F, García-Gutiérrez A, de Vicente A (1991) Accumulation of glutamine synthetase during early development of maritime pine (Pinus pinaster) seedlings. Planta 185:372–378

    Google Scholar 

  • Cánovas FM, Cantón FR, García-Gutiérrez A, Gallardo F, Crespillo R (1998) Molecular physiology of glutamine and glutamate biosynthesis in developing conifer seedlings. Physiol Plant 103:287–294

    Article  Google Scholar 

  • Cantón FR, García-Gutierrez A, Gallardo F, de Vicente A, Cánovas FM (1993) Molecular characterization of a cDNA clone encoding glutamine synthetase from a gymnosperm: Pinus sylvestris. Plant Mol Biol 22:819–828

    PubMed  Google Scholar 

  • Cantón FR, Suárez M-F, José-Stanyol M, Cánovas FM (1999) Expression analysis of a cytosolic glutamine synthetase gene in cotyledons of Scots pine seedlings: developmental, light-dark regulation and spatial distribution of specific transcripts. Plant Mol Biol 40:623–634

    Article  PubMed  Google Scholar 

  • Coleman G, Bañados MP, Chen THH (1994) Poplar bark storage protein and a related wound induced gene are differentially induced by nitrogen. Plant Physiol 106:211–215

    CAS  PubMed  Google Scholar 

  • Cren M, Hirel B (1999) Glutamine synthetase in higher plants. Regulation of gene and protein expression from the organ to the cell. Plant Cell Physiol 40:1187–1193

    Google Scholar 

  • de la Torre F, García-Gutiérrez A, Crespillo R, Cantón FR, Avila C, Cánovas FM (2002) Functional expression of two pine glutamine synthetase genes in bacteria reveals that they encode cytosolic holoenzymes with different molecular and catalytic properties. Plant Cell Physiol 43:802–809

    Article  PubMed  Google Scholar 

  • Devic M, Albert S, Delseny M, Roscoe TJ (1997) Efficient PCR walking on plant genomic DNA. Plant Physiol Biochem 35:331–339

    CAS  Google Scholar 

  • Dubois F, Brugière N, Sangwan RS, Hirel B (1996) Localization of tobacco cytosolic glutamine synthetase enzymes and the corresponding transcripts shows organ- and cell-specific patterns of protein synthesis and gene expression. Plant Mol Biol 31:803–817

    CAS  PubMed  Google Scholar 

  • Forde BG, Freeman J, Oliver JE, Pineda M (1990) Nuclear factors interact with conserved AT-rich elements upstream of a nodule-enhanced glutamine synthetase gene from French bean. Plant Cell 2:925–939

    Article  CAS  PubMed  Google Scholar 

  • García-Gutierrez A, Dubois F, Cantón FR, Gallardo F, Sangwan RS, Cánovas FM (1998) Two different modes of early development and nitrogen assimilation in gymnosperm seedlings. Plant J 13:187–199

    Article  Google Scholar 

  • Gómez-Maldonado J, Crespillo R, Avila C, Cánovas FM (2001) Efficient preparation of maritime pine (Pinus pinaster) protoplasts suitable for transgene expression analysis. Plant Mol Biol Rep 19:361–366

    Google Scholar 

  • Gray-Mitsumune M, Molitor EK, Cukovic D, Carlson JE, Douglas CJ (1999) Developmentally regulated patterns of expression directed by poplar PAL promoters in transgenic tobacco and poplar. Plant Mol Biol 39:657–669

    Article  CAS  PubMed  Google Scholar 

  • Gubler F, Jacobsen JV (1992) Gibberellin responsive elements in the promoter of a barley high-pI α-amylase gene. Plant Cell 4:1435–1441

    Google Scholar 

  • Higo K, Ugawa Y, Iwamoto M, Korenaga T (1999) Plant cis-acting regulatory DNA element (PLACE) database: 1999. Nucleic Acids Res 27:297–300

    CAS  PubMed  Google Scholar 

  • Huang N, Sutliff TD, Litts JC, Rodriguez RL (1990) Classification and characterization of the rice α-amylase multigene family. Plant Mol Biol 14:655–668

    CAS  PubMed  Google Scholar 

  • Ireland RJ, Lea PJ (1999) The enzymes of glutamine, glutamate, asparagine and aspartate metabolism. In: Singh BK (ed) Plant amino acids. Biochemistry and biotechnology. Dekker, New York, pp 49–109

  • Jefferson RA (1987) Assaying chimeric genes in plants: the GUS gene fusion system. Plant Mol Biol Rep 5:387–405

    CAS  Google Scholar 

  • Jefferson RA, Kavanagh TA, Bevan MW (1987) GUS fusion: β-glucuronidase as a sensitive and versatile gene fusion marker in higher plants. EMBO J 6:3901–3907

    CAS  PubMed  Google Scholar 

  • Lam H-M, Koschigano KT, Oliveira IC, Melo-Oliveira R, Coruzzi GM (1996) The molecular-genetics of nitrogen assimilation into amino acids in higher plants. Annu Rev Plant Physiol Plant Mol Biol 47:569–593

    CAS  Google Scholar 

  • Maniatis T, Fristch EF, Sambrook J (1982) Molecular cloning: a laboratory manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY

    Google Scholar 

  • Marsolier MC, Debrosses G, Hirel B (1995) Identification of several soybean cytosolic glutamine synthetase transcripts highly or specifically expressed in nodules: expression studies using one of the corresponding genes in transgenic Lotus corniculatus. Plant Mol Biol 27:1–15

    CAS  PubMed  Google Scholar 

  • Pujade-Renaud V, Perrot-Rechenmann C, Chrestin H, Jacob JL, Guern J (1997) Characterization of a full length cDNA clone encoding glutamine synthetase from rubber tree latex. Plant Physiol Biochem 35:85–93

    CAS  Google Scholar 

  • Rombauts S, Déhais P, Van Montagu M, Rouzé P (1999) PlantCARE, a plant cis-acting regulatory element database. Nucleic Acids Res 27:295–296

    Article  CAS  PubMed  Google Scholar 

  • Sakakibara H, Shimizu H, Hase T, Yamazaki Y, Takao T, Shimonishi Y, Sugiyama T (1996) Molecular identification and characterization of cytosolic isoforms of glutamine synthetase in maize roots. J Biol Chem 271:29561–29568

    Article  CAS  PubMed  Google Scholar 

  • Sambrook J, Fritsch E, Maniatis T (1989) Molecular cloning: a laboratory manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY

    Google Scholar 

  • Sanger F, Miklen S, Coulson AR (1977) DNA sequencing with chain termination inhibitors. Proc Natl Acad Sci USA 74:5463–5467

    PubMed  Google Scholar 

  • Schneider WL, Gifford DJ (1994) Loblolly pine seed dormancy. I. The relationship between protein synthesis and the loss of dormancy. Physiol Plant 90:246–252

    Article  CAS  Google Scholar 

  • Simola LK (1974) The ultrastructure of dry and germinating seeds of Pinus sylvestris. Acta Bot Fenn 103:1–31

    Google Scholar 

  • Stone SL, Gifford DJ (1997) Structural and biochemical changes in loblolly pine (Pinus taeda L.) seeds during germination and early seedling growth. II. Storage protein reserves. Int J Plant Sci 158:727–737

    CAS  Google Scholar 

  • Suárez M-F, Avila C, Gallardo F, Cantón FR, García-Gutiérrez A, Claros MG, Cánovas FM (2002) Molecular and enzymatic analysis of ammonium assimilation in woody plants. J Exp Bot 53:891–904

    Article  PubMed  Google Scholar 

  • Vézina LP, Margolis HA (1990) Purification and properties of glutamine synthetase in leaves and roots of Pinus banksiana Lamb. Plant Physiol 94:657–664

    Google Scholar 

  • Wilkinson M, Doskow J, Linsey S (1990) RNA blots: Staining procedures and optimization of conditions. Nucleic Acids Res 19:679

    Google Scholar 

  • Willmitzer L, Wagner KG (1981) The isolation of nuclei from tissue culture cells. Exp Cell Res 135:69–77

    CAS  PubMed  Google Scholar 

  • Wingender E, Chen X, Fricke E, Geffers R, Hehl R, Liebich I, Krull M, Matys V, Michael H, Ohnhäuser R, Prüb M, Schacherer F, Thiele S, Urbach S (2001) The TRANSFAC system on gene expression regulation. Nucleic Acids Res 29:281–283

    Article  CAS  PubMed  Google Scholar 

  • Yaxley JR, Ross JJ, Sherriff LJ, Reid JB (2001) Gibberellin biosynthesis mutations and root development in pea. Plant Physiol 125:627–633

    Article  CAS  PubMed  Google Scholar 

Download references

Acknowledgements

The authors acknowledge financial support by the Ministerio de Ciencia y Tecnología, Spain (Grant PB98-1396 to F.M.C.). J.G.-M. is supported by a PhD fellowship from the FPI programme, Spain. We are grateful to Dr. Malcolm Campbell (Oxford University, UK) for valuable comments and critical reading of the manuscript.

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Correspondence to Concepción Avila.

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Gómez-Maldonado, J., Cánovas, F.M. & Avila, C. Molecular analysis of the 5′-upstream region of a gibberellin-inducible cytosolic glutamine synthetase gene (GS1b) expressed in pine vascular tissue. Planta 218, 1036–1045 (2004). https://doi.org/10.1007/s00425-003-1185-2

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