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StatsX v2.0: the interactive graphical software for population statistics on X-STR

  • Yubo Lang
  • Fei Guo
  • Qingshan Niu
Short Communication

Abstract

StatsX (Statistics for X-STR) v2.0 is developed to facilitate the workflow for analysis of population data on X-chromosomal short tandem repeat (X-STR) marker. The interactive graphical and installable software can estimate allele/haplotype frequencies from female, male, and pooled samples and calculate forensic parameters by importing a single file. In addition, it is able to filter out the invalid raw data and export a series of pre-formatted Arlequin input files that are directly used for testing the significance of the Hardy–Weinberg equilibrium (HWE), linkage disequilibrium (LD), and gender differentiation. As expected, all results of frequencies and forensic parameters can be saved as EXCEL workbooks and also plotted as bar or line graphs. Further, full concordance was obtained by recalculating frequencies and forensic parameters with other established software from a published Han Chinese population.

Keywords

Population genetics Biostatistics Software X-STR StatsX 

Notes

Acknowledgements

The authors would like to thank Andreas O. Tillmar for the useful discussion.

Funding information

This study was supported by the Science Foundation of Criminal Investigation Police University of China (D2017037, D2017038) and the National Key Research and Development Program of China (2017YFC0822602).

Compliance with ethical standards

Conflict of interest

The authors declare that they have no conflict of interest.

Supplementary material

414_2018_1824_MOESM1_ESM.xlsx (2.4 mb)
ESM 1 (XLSX 2441 kb)

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Copyright information

© Springer-Verlag GmbH Germany, part of Springer Nature 2018

Authors and Affiliations

  1. 1.Department of Criminal Science and TechnologyCriminal Investigation Police University of ChinaShenyangPeople’s Republic of China
  2. 2.Department of Forensic MedicineCriminal Investigation Police University of ChinaShenyangPeople’s Republic of China
  3. 3.Division of Scientific Research ManagementCriminal Investigation Police University of ChinaShenyangPeople’s Republic of China

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