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17 Y-STR haplotype diversity in São Paulo state (southeast of Brazil)

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Abstract

A sample of 158 Brazilian males from São Paulo (SP), Brazilian southeast, was typed for 17 Y-STR loci (DYS19, DYS389I, DYS389II, DYS390, DYS391, DYS392, DYS393, DYS437, DYS438, DYS439, DYS448, DYS456, DYS458, DYS635, YGATA_H4.1, and DYS385ab). A total of 158 haplotypes were identified, of which all were unique. The haplotype diversity and discrimination capacity were calculated in 1.0 and the genetic diversity was 67.4%. Pairwise haplotype distances showed that the São Paulo population is not significantly different from Rio de Janeiro and Portugal, but is different from African and Native American.

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Acknowledgments

We thank Fundação do Desenvolvimento Administrativo (FUNDAP) for the scholarship (to L. F. S.) and to Jessica Grant for reviewing and support.

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Authors and Affiliations

  1. Centro de Energia Nuclear na Agricultura, Piracicaba, São Paulo, Brazil

    Leandro Fonseca de Souza

  2. Centro de Ciências Naturais e Humanas, Universidade Federal do ABC, Santo André, São Paulo, Brazil

    Leandro Fonseca de Souza

  3. Instituto de Medicina Social e Criminologia de São Paulo, São Paulo, Brazil

    Carlos Henrique Ares Silveira da Motta

  4. Instituto de Biologia, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Brazil

    Rodrigo Soares Moura-Neto

Authors
  1. Leandro Fonseca de Souza
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  2. Carlos Henrique Ares Silveira da Motta
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  3. Rodrigo Soares Moura-Neto
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Corresponding author

Correspondence to Leandro Fonseca de Souza.

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The authors declare that they have no conflict of interest.

Electronic supplementary material

Supplementary Figure 1

Number and origin of haplotypes evaluated for politic microregion of São Paulo state (GIF 131 kb)

High resolution image (EPS 331 kb)

Supplementary Figure 2

FST of 17-STR (a) and minimal haplotype (b) and RST of 17-STR (c) and minimal haplotype (d) (GIF 44 kb)

High resolution image (EPS 543 kb)

Supplementary Table S1

(XLS 37 kb)

Supplementary Table S2

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Supplementary Table S3

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Supplementary Table S4

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Supplementary Table S5

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de Souza, L.F., da Motta, C.H.A.S. & Moura-Neto, R.S. 17 Y-STR haplotype diversity in São Paulo state (southeast of Brazil). Int J Legal Med 133, 81–83 (2019). https://doi.org/10.1007/s00414-018-1823-7

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  • DOI: https://doi.org/10.1007/s00414-018-1823-7

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