Aliasgharzad N, Molaei A, Oustan S (2011) Pollution induced community tolerance (PICT) of microorganisms in soil incubated with different levels of Pb. Int J Environ Ecol Eng 5:838–842
Google Scholar
Alloway BJ (2012) Sources of heavy metals and metalloids in soils. Heavy Metals in Soils, 11–50. https://doi.org/10.1007/978-94-007-4470-7
Anderson JAH, Hooper MJ, Zak JC, Cox SB (2009) Characterization of the structural and functional diversity of indigenous soil microbial communities in smelter-impacted and nonimpacted soils. Environ Toxicol Chem 28:534–541
CAS
PubMed
Google Scholar
Bååth E (1989) Effects of heavy metals on soil microbial processes and populations (a review). Wat Air Soil Poll 47:335–379
Google Scholar
Bååth E (1992) Measurement of heavy metal tolerance of soil bacteria using thymidine incorporation into bacteria extracted after homogenization-centrifugation. Soil Biol Biochem 24:1167–1172
Google Scholar
Bååth E (1994) Thymidine and leucine incorporation in soil bacteria with different cell size. Microb Ecol 27:267–278
PubMed
Google Scholar
Bååth E, Díaz-Raviña M, Bakken LR (2005) Microbial biomass, community structure and metal tolerance of a naturally Pb-enriched forest soil. Microb Ecol 50:496–505
PubMed
Google Scholar
Bååth E, Pettersson M, Söderberg KH (2001) Adaptation of a rapid and economical microcentrifugation method to measure thymidine and leucine incorporation by soil bacteria. Soil Biol Biochem 33:1571–1574
Google Scholar
Bascomb CL (1968) Distribution of pyrophosphate-extractable iron and organic carbon in soils of various groups. J Soil Sci 19:251–268
CAS
Google Scholar
Bérard A, Capowiez L, Mombo S, Schreck E, Dumat C, Deola F, Capowiez Y (2016) Soil microbial respiration and PICT responses to an industrial and historic lead pollution: a field study. Environ Sci Pollut Res 23:4271–4281
Google Scholar
Bertsch PM, Bloom PR (1996). In: Bigham JM (ed) Methods of Soil analysis Part 3. Chemical methods, Soil Science Society of America, Madison, WI, pp 517–550
Google Scholar
Blakemore LC (1978) Exchange complex dominated by amorphous material (ECDAM). In: Smith, G.D. (Ed.), The Andisol Proposal. Soil Bureau, Lower Hutt, New Zealand, pp. 21–22.
Blanck H (2002) A critical review of procedures and approaches used for assessing pollution-induced community tolerance (PICT) in biotic communities. Hum Ecol Risk Assess 8:1003–1034
Google Scholar
Blanck H, Wängberg S-Å, Molander S (1988) Pollution-induced community tolerance – a new ecotoxicological tool. In: Cairs J Jr, Pratt JR (Eds) Functional testing of aquatic biota for estimating hazards of chemicals. ASTM STP 988, Philadelphia, pp 219–230
Boivin MEY, Breure AM, Posthuma L, Rutgers M (2002) Determination of field effects of contaminants - significance of pollution-induced community tolerance. Hum Ecol Risk Assess 8:1035–1055
Google Scholar
Boivin MEY, Greve GD, Kools SAE, van der Wurff AWG, Leeflang P, Smit E, Breure AM, Rutgers M, van Straalen NM (2006) Discriminating between effects of metals and natural variables in terrestrial bacterial communities. Appl Soil Ecol 34:103–113
Google Scholar
Bradl HB (2004) Adsorption of heavy metal ions on soils and soils constituents. J Colloid Interf Sci 277:1–18
CAS
Google Scholar
Brady NC, Weil RR (2002) The colloidal fraction: seat of soil chemical and physical activity. The Nature and Properties of Soils. Prentice Hall, New Yersey, pp 328–373
Google Scholar
Brandt KK, Sjøholm OR, Krogh KA, Halling-Sørensen B, Nybroe O (2009) Increased pollution-induced bacterial community tolerance to sulfadiazine in soil hotspots amended with artificial root exudates. Environ Sci Technol 43:2963–2968
CAS
PubMed
Google Scholar
Campillo-Cora C, Conde-Cid M, Arias-Estévez M, Fernández-Calviño D, Alonso-Vega F (2020) Specific adsorption of heavy metals in soils: individual and competitive experiments. Agronomy 10:1113
CAS
Google Scholar
Campillo-Cora C, Soto-Gómez D, Arias-Estévez M, Bååth E, Fernández-Calviño D (2021) Bacterial community tolerance to Cu in soils with geochemical baseline concentrations (GBCs) of heavy metals: importance for pollution induced community tolerance (PICT) determinations using the leucine incorporation method. Soil Biol Biochem 155:108157.
Chrysochoou M, Theologou E, Bompoti N, Dermatas D, Panagiotakis I (2016) Occurrence, origin and transformation processes of geogenic chromium in soils and sediments. Curr Pollut Rep 2:224–235
CAS
Google Scholar
Day PR (1965) Particle fractionation and particle-size analysis. In Black CA, Evans DD, White JL, Ensminger LE, Clark FE (Eds) Methods of soils analysis. Part 1. Agron. Monogr. 9. ASA and SSSA, Madison, WI, pp 545–567
de Lima e Silva AA, Ribeiro de Carvalho MA, L de Souza SAL, Teixeira Dias PM, da Silva Filho RG, de Meirelles Saramago CS, de Melo Bento CA, Hofer E (2012) Heavy metal tolerance (Cr, Ag and Hg) in bacteria isolated from sewage. Braz J Microbiol 43:1620-1631
Demoling LA, Bååth E (2008) No long-term persistence of bacterial pollution-induced community tolerance in tylosin-polluted soil. Environ Sci Technol 42:6917–6921
PubMed
Google Scholar
Demoling LA, Bååth E, Greve G, Wouterse M, Schmitt H (2009) Effects of sulfamethoxazole on soil microbial communities after adding substrate. Soil Biol Biochem 41:840–848
Díaz-Raviña M, Bååth E, Frostegård Å (1994) Multiple heavy metal tolerance of soil bacterial communities and its measurement by a thymidine incorporation technique. Appl Environ Microbiol 60:2238-2247
Article
PubMed
PubMed Central
Google Scholar
Díaz-Raviña M,Bååth E (1996) Development of metal tolerance in soil bacterial communities exposed to experimentally increased metal levels. Appl Environ Microbiol 62:2970-2977
CAS
Article
PubMed
PubMed Central
Google Scholar
Fernández-Calviño D, Arias-Estévez M, Díaz-Raviña M, Bååth E (2011) Bacterial pollution induced community tolerance (PICT) to Cu and interactions with pH in long-term polluted vineyard soils. Soil Biol Biochem 43:2324–2331
Google Scholar
Giller KE, Witter E, McGrath SP (1998) Toxicity of heavy metals to microorganisms and microbial processes in agricultural soils: a review. Soil Biol Biochem 30:1389–1414
CAS
Google Scholar
Green AJ (1981) Particle-size analysis. In McKeague JA (Ed): Manual on soil sampling and methods of analysis. Canadian Soc Soil Sci, Ottawa, Canada, pp 4–29
Holmgren GGS (1967) A rapid citrate-dithionite extractable iron procedure. Soil Sci Soc Am J 31:212–215
Google Scholar
Hoogsteen MJJ, Lantinga EA, Bakker EJ, Groot JCJ, Tittonell PA (2015) Estimating soil organic carbon through loss ignition: effect of ignition conditions and structural water loss. Eur J Soil Sci 66:320–328
CAS
Google Scholar
Imfeld G, Bringel F, Vuilleumier S (2011) Bacterial tolerance in contaminated soils: potential of the PICT approach in microbial ecology. In: Amiard-Triquet C, Rainbow S, Roméo M (eds) Anonymous Tolerance to Environmental Contaminants. CRC Press, New York, pp 335–364
Google Scholar
Jones DL, Willett VB (2006) Experimental evaluation of methods to quantify dissolved organic nitrogen (DON) and dissolved organic carbon (DOC) in soil. Soil Biol Biochem 38:991–999
CAS
Google Scholar
Joynt J, Bischoff M, Turco R, Konopka A, Nakatsu CH (2006) Microbial community analysis of soils contaminated with lead, chromium and petroleum hydrocarbons. Microb Ecol 51:209–219
CAS
PubMed
Google Scholar
Kamitani T, Oba H, Kaneko N (2006) Microbial biomass and tolerance of microbial community on an aged heavy metal polluted floodplain in Japan. Water Air Soil Pollut 172:185–200
CAS
Google Scholar
Lakanen E, Erviö R (1971) A comparison of eight extractants for determination of plant available micronutrients in soils. Acta Agral Fenn 123:223–232
Google Scholar
Lekfeldt JDS, Magid J, Holm PE, Nybroe O, Brandt KK (2014) Evaluation of the leucine incorporation technique for detection of pollution-induced community tolerance to copper in a long-term agricultural field trial with urban waste fertilizers. Environ Pollut 194:78–85
CAS
PubMed
Google Scholar
Lindsay WL, Norwell WA (1978) Development of DTPA of soil test for Zn, Fe, Mn and Cu. J Am Soil Sci 42:421–428
CAS
Google Scholar
Liu F, Wu J, Ying GG, Luo Z, Feng H (2012) Changes in functional diversity of soil microbial community with addition of antibiotics sulfamethoxazole and chlortetracycline. Appl Microbiol Biotechnol 95:1615–1623
CAS
PubMed
Google Scholar
Lockwood CL, Stewart DI, Mortimer RJG, Mayes WM, Jarvis AP, Gruiz K, Burke IT (2015) Leaching of copper and nickel in soil-water systems contaminated by bauxite residue (red mud) from Ajka, Hungary: the importance of soil organic matter. Environ Sci Pollut Res 22:10800–10810
CAS
Google Scholar
Loyaux-Lawniczak S, Lecomte P, Ehrhardt J (2001) Behavior of hexavalent chromium in a polluted groundwater: redox processes and immobilization in soils. Environ Sci Technol 35:1350–1357
CAS
PubMed
Google Scholar
Macdonald CA, Yang X, Clark IM, Zhao F, Hirsch PR, McGrath SP (2010) Relative impact of soil, metal source and metal concentration on bacterial community structure and community tolerance. Soil Biol Biochem 42:1408–1417
CAS
Google Scholar
Massoura ST, Echevarria G, Becquer T, Ghanbaja J, Leclerc-Cessac E, Morel J (2006) Control of nickel availability by nickel bearing minerals in natural and anthropogenic soils. Geoderma 136:28–37
CAS
Google Scholar
Meisner A, Bååth E, Rousk J (2013) Microbial growth responses upon rewetting soil dried for four days or one year. Soil Biol Biochem 66:188–192
CAS
Google Scholar
Nannipieri P, Ascher J, Ceccherini MT, Landi L, Pietramellara G, Renella G (2003) Microbial diversity and soil functions. Eur J Soil Sci 54:655–670
Google Scholar
Niklińska M, Chodak M, Laskowski R (2005) Characterization of the forest humus microbial community in a heavy metal polluted area. Soil Biol Biochem 37:2185–2194
Google Scholar
Niklińska M, Chodak M, Laskowski R (2006) Pollution-induced community tolerance of microorganisms from forest soil organic layers polluted with Zn or Cu. Appl Soil Ecol 32:265–272
Google Scholar
Oze C, Fendorf S, Bird DK, Coleman RG (2004) Chromium geochemistry of serpentine soils. Int Geol Rev 46:97–126
Google Scholar
Peijnenburg WJGM, Jager T (2003) Monitoring approaches to assess bioaccessibility and bioavailability of metals: matrix issues. Ecotoxicol Eviron Saf 56:63–77
CAS
Google Scholar
Puglisi E, Hamon R, Vasileiadis S, Coppolecchia D, Trevisan M (2012) Adaptation of soil microorganisms to trace metal contamination: a review of mechanisms, methodologies, and consequences for risk assessment and remediation. Crit Rev Environ Sci Technol 42:2435–2470
Google Scholar
Rauret G (1998) Extraction procedures for the determination of heavy metals in contaminated soil and sediment. Talanta 46:449–455
CAS
PubMed
Google Scholar
Reed ST, Martens DC (1996) In Bigham JM (Ed): Methods of Soil Analysis Part 3. Chemical Methods, Madison, WI, pp .703–722
Rousk J, Bååth E (2011) Growth of saprotrophic fungi and bacteria in soil. FEMS Microbiol Ecol 78:17–30
CAS
PubMed
Google Scholar
Rusk JA, Hamon RE, Stevens DP, McLaughlin MJ (2004) Adaptation of soil biological nitrification to heavy metals. Environ Sci Technol 38:3092–3097
CAS
PubMed
Google Scholar
Salminen J, Van Gestel CAM, Oksanen J (2001) Pollution-induced community tolerance and functional redundancy in a decomposer food web in metal-stressed soil. Environ Toxicol Chem 20:2287–2295
CAS
PubMed
Google Scholar
Santás-Miguel V, Arias-Estévez M, Díaz-Raviña M, Fernández-Sanjurjo MJ, Álvarez-Rodríguez E, Núñez-Delgado A, Fernández-Calviño D (2020) Bacterial community tolerance to tetracycline antibiotics in Cu polluted soils. Agronomy 10:1220
Google Scholar
Sauvé S, Hendershot W, Allen HE (2000) Solid-solution partitioning of metals in contaminated soils: dependence on pH, total metal burden, and organic matter. Environ Sci Technol 34:1125–1131
Google Scholar
Schmitt H, Martinali B, Van Beelen P, Seinen W (2006) On the limits of toxicant-induced tolerance testing: co-tolerance and response variation of antibiotic effects. Environ Toxicol Chem 25:961–1968
Google Scholar
Schmitt H, van Beelen P, Tolls J, Van Leeuwen CL (2004) Pollution-induced community tolerance of soil microbial communities caused by the antibiotic sulfachloropyridazine. Environ Sci Technol 38:1148–1153
CAS
PubMed
Google Scholar
Senwo ZN, Tazisong IA (2004) Metal contents in soils of Alabama. Commun Soil Sci Plant Anal 35:2837–2848
CAS
Google Scholar
Shaheen SM, Tsadilas CD, Rinklebe J (2013) A review of the distribution coefficients of trace elements in soils: influence of sorption system, element characteristics, and soil colloidal properties. Adv Colloid Interface Sci 201–202:43–56
PubMed
Google Scholar
Shi W, Becker J, Bischoff M, Turco RF, Konopka AE (2002) Association of microbial community composition and activity with lead, chromium, and hydrocarbon contamination. Appl Environ Microbiol 68:3859–3866
CAS
PubMed
PubMed Central
Google Scholar
Stefanowicz AM, Niklinska M, Kapusta P, Szarek-Lukaszewska G (2010) Pine forest and grassland differently influence the response of soil microbial communities to metal contamination. Sci Total Environ 408:6134–6141
CAS
PubMed
Google Scholar
Stefanowicz AM, Niklińska M, Laskowski R (2009) Pollution-induced tolerance of soil bacterial communities in meadow and forest ecosystems polluted with heavy metals. Eur J Soil Biol 45:363–369
CAS
Google Scholar
Sumner ME, Miller WP (1996). In: Bigham JM (ed) Methods of Soil Analysis Part 3. Chemical Methods, Soil Science Society of America, Madison, WI, pp 1201–1230
Google Scholar
Tlili A, Berard A, Blanck H, Bouchez A, Cássio F, Eriksson KM, Morin S, Montuelle B, Navarro E, Pascoal C, Pesce S, Schmitt-Jansen M, Behra R (2016) Pollution-induced community tolerance (PICT): towards and ecologically relevant risk assessment of chemicals in aquatic systems. Freshw Biol 61:2141–2151
CAS
Google Scholar
Van Beelen P, Wouterse M, Posthuma L, Rutgers M (2004) Location-specific ecotoxicological risk assessment of metal-polluted soils. Environ Toxicol Chem 23:2769–2779
PubMed
Google Scholar
Vázquez-Blanco R, Arias-Estévez M, Bååth E, Fernández-Calviño D (2021) Comparing the effect of Cu-based fungicides and pure Cu salts on microbial biomass, microbial community structure and bacterial community tolerance to Cu. J Hazard Mater 409:124960
Vázquez-Blanco R, Arias-Estévez M, Bååth E, Fernández-Calviño D (2020) Comparison of Cu salts and commercial Cu based fungicides on toxicity towards microorganisms in soil. Environ Pollut 257:113585
Vithanage M, Rajapaksha AU, Oze C, Rajakaruna N, Dissanayake CB (2014) Metal release from serpentine soils in Sri Lanka. Environ Monit Assess 186:3415–3429
CAS
PubMed
Google Scholar
Wakelin S, Gerard E, Black A, Hamonts K, Condron L, Yuan T, Van Nostrand J, Zhou J, O’Callaghan M (2014) Mechanisms of pollution induced community tolerance in a soil microbial community exposed to Cu. Environ Pollut 190:1–9
CAS
PubMed
Google Scholar
Wang F, Yao J, Si Y, Chen H, Russel M, Chen K, Qian Y, Zaray G, Bramanti E (2010) Short-time effect of heavy metals upon microbial community activity. J Hazard Mater 173:510–516
CAS
PubMed
Google Scholar
Yamada N, Katoh M (2020) Feature of lead complexed with dissolved organic matter on lead immobilization by hydroxyapatite in aqueous solutions and soils. Chemosphere 249:126122.
Zhang X, Li J, Wei D, Li B, Ma Y (2015) Predicting soluble nickel in soils using soil properties and total nickel. PLoS ONE 10(7):e0133920. https://doi.org/10.1371/journal.pone.0133920
CAS
Article
PubMed
PubMed Central
Google Scholar
Zhou Y, Yao J, Choi MMF, Chen Y, Chen H, Mohammad R, Zhuang R, Chen H, Wang F, Maskow T, Zaray G (2009) A combination method to study microbial communities and activities in zinc contaminated soil. J Hazard Mater 169:875–881
CAS
PubMed
Google Scholar