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Syntenic assignment of human serotonin receptor subtype 2 (HTR2), esterase D (ESD), and fms-related tyrosine kinase (FLT) homologs to bovine Chromosome 12

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Abstract

Bovine x rodent somatic hybrid cells have been used to syntenically map three bovine genes homologous to loci on human Chromosome (Chr) 13. These three loci, fms-related tyrosine kinase gene (FLT), esterase D (ESD), and 5-hydroxytryptamine receptor 2 (HTR2; serotonin receptor subtype 2), were assigned to bovine Chr 12 (BTA12) with 91-95% concordance to the coagulation factor 10 (F10) locus. Along with a previously mapped BTA12 gene, retinoblastoma-1 (RBI), this conserved synteny group spans 178 cM on human Chr 13 (HSA13). Previous reports suggested homology between HSA13 and both BTA2 and BTA12. Results reported here extend the boundary of the HSA13-BTA12 comparative map, contradict the previous preliminary assignment of ESD to BTA2, and suggest instead that the q arm of HSA13 may be entirely conserved in BTA12.

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References

  • Blin, N., Stafford, D.W. (1976). A general method for isolation of high molecular weight DNA from eukaryotes. Nucleic Acids Res. 3, 2303–2308.

    PubMed  CAS  Google Scholar 

  • Davisson, M.T., Roderick, T.H., Doolittle, D.P., Hillyard, A.L., Guidi, J.N. (1990). Locus map of the mouse. In Genetic Maps: Locus Maps of Complex Genomes, S.J. O’Brien, ed., 5th ed., (Cold Spring Harbor, N.Y.: Cold Spring Harbor Laboratory Press), pp. 4.3–4.35.

    Google Scholar 

  • Dietz, A.B., Neibergs, H.L., Womack, J.E. (1992). Assignment of eight loci to bovine syntenic groups by use of PCR: extension of a comparative gene map. Mamm. Genome 3, 106–111.

    CAS  Google Scholar 

  • Graphodatsky, A.S., Biltueva, L.S., Filippov, V.A., Eremina, V.R., Lushnikova, T.P., Shumny, T.V., Ermolaev, V., Ermolaev, V.I. (1993). Localization of ESD and A2M genes to sheep chromosomes 3 by in situ hybridization. Cytogenet. Cell Genet. 62, 156–158.

    Article  PubMed  CAS  Google Scholar 

  • Hayes, H. (1995). Chromosome painting with human chromosome-specific DNA libraries reveals the extent and distinction of conserved segments in bovine chromosomes. Cytogenet. Cell Genet. 71, 168–174.

    Article  PubMed  CAS  Google Scholar 

  • Hayes, H.C., Popescu, P., Dutrillaux, B. (1993). Comparative gene mapping of lactoperoxidase, retinoblastoma, and 8-lactalbumin genes in cattle, sheep, and goats. Mamm. Genome 4, 593–597.

    Article  PubMed  CAS  Google Scholar 

  • Hillier, L., Green, P. (1991). OSP: a computer program for choosing PCR and DNA sequencing primers. PCR Methods Appl. 1, 124–128.

    PubMed  CAS  Google Scholar 

  • Hsieh, C.L., Bowcock, A.M., Farrer, L.A., Hebert, J.M., Huang, K.N., Cavalli-Sforza, L.L., Julius, D., Francke, U. (1990). The serotonin receptor subtype 2 locus HTR2 is on human chromosome 13 near genes for esterase D and retinoblastoma-1 and on mouse chromosome 14. Somatic Cell Mol. Genet. 16, 567–574.

    Article  CAS  Google Scholar 

  • Johansson, M., Ellergren, H., Andersson, L. (1995). Comparative mapping reveals extensive linkage conservation-but with gene order rearrangements-between the pig and the human genomes. Genomics 25, 682–690.

    Article  PubMed  CAS  Google Scholar 

  • Lee, E.Y., Lee, W.H. (1986). Molecular cloning of the human esterase D gene, a genetic marker of retinoblastoma. Proc. Natl. Acad. sci. USA 83, 6337–6341.

    Article  PubMed  CAS  Google Scholar 

  • O’Brien, S.J., Peters, J., Searle, J., Womack, J.E., Marshall-Graves, J. (1993a). Report of the committee on comparative gene mapping. Genome Prior. Rep. 1, 758–809.

    Google Scholar 

  • O’Brien, S.J., Womack, J.E., Lyons, L.A., Moore, K.J., Jenkins, N.A., Copeland, N.G. (1993b). Anchored reference loci for comparative genome mapping in mammals. Nature Genet. 3, 103–111.

    Article  PubMed  CAS  Google Scholar 

  • Rettenberger, G., Klett, C, Zechner, U., Kunz, J., Vogel, W., Hameister, H. (1995). Visualization of the conservation of synteny between humans and pigs by heterologous chromosomal painting. Genomics 26, 372–378.

    Article  PubMed  CAS  Google Scholar 

  • Solinas-Toldo, S., Lengauer, C, Fries, R. (1995). Comparative genome map of human and cattle. Genomics 27, 489–496.

    Article  PubMed  CAS  Google Scholar 

  • Sparkes, R.S., Lan, N., Klisak, I., Mohandas, T., Diep, A., Kojis, T., Heinzmann, C, Shih, J.C. (1991). Assignment of a serotonin 5HT-2 receptor gene (HTR2) to human chromosome 13ql4-q21 and mouse chromosome 14. Genomics 9, 461–465.

    Article  PubMed  CAS  Google Scholar 

  • Stone, J.C, Crosby, J.L., Kozak, CA., Schievella, A.R., Bernards, R., Nadeau, J.H. (1989). The murine retinoblastoma homolog maps to chromosome 14 near Es-10. Genomics 5, 70–75.

    Article  PubMed  CAS  Google Scholar 

  • Washington, S.S., Warburton, D., Chakravarti, A. (1995). Report of the second international workshop on human chromosome 13 mapping 1994. Cytogenet. Cell Genet. 70, 2–22.

    Google Scholar 

  • Womack, J.E., Moll, Y.D. (1986). Gene map of the cow: conservation of the linkage with mouse and man. J. Hered. 77, 2–7.

    PubMed  CAS  Google Scholar 

  • Yamada, J., Kuramoto, T., Serikawa, T. (1994). A rat genetic linkage map and comparative maps for mouse or human homologous rat genes. Mamm. Genome 5, 63–83.

    Article  PubMed  CAS  Google Scholar 

  • Yoshida, M.C., Satoh, H., Matsushime, H., Shibuya, M., Sasaki, M. (1987). Two ros-related protooncogenes, c-ros-1 and flt, are regionally mapped on human chromosome 6q22 and 13ql2, respectively. Cytogenet. Cell Genet. 46, 724.

    Google Scholar 

  • Yuzbasiyan-Gurkan, V., Wagnitz, S., Blanton, S.H., Brewer, G.J. (1993). Linkage studies of the esterase D and retinoblastoma genes to canine copper toxicosis: a model for Wilson disease. Genomics 15, 86–90.

    Article  PubMed  CAS  Google Scholar 

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Sun, H.S., Womack, J.E. & Kirkpatrick, B.W. Syntenic assignment of human serotonin receptor subtype 2 (HTR2), esterase D (ESD), and fms-related tyrosine kinase (FLT) homologs to bovine Chromosome 12. Mammalian Genome 7, 518–519 (1996). https://doi.org/10.1007/s003359900154

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