Abstract
Short-chain acyl-CoA dehydrogenase (SCAD) is one of four straight-chain length specific enzymes involved in the first step of fatty acid β-oxidation. To further understand the similarities between the members of this gene family, to characterize how the gene is regulated, and to determine if there is coordinate regulation between these similar genes, we have isolated genomic clones containing the mouse Acads gene. We show that Acads is a compact, single-copy gene approximately 5000 bp in size. We sequenced the entire coding portion of the gene, all of the intron/ exon junctions, and an 850-bp segment upstream of the translation start site. We have determined that the gene consists of 10 exons ranging in size from 57 bp to 703 bp, and 9 introns ranging in size from 80 bp to approximately 700 bp. The 5′ region of the mouse Acads gene lacks a TATA box or a CAAT box, is GC rich, and also lacks any similarity to the related gene, medium-chain acyl-CoA dehydrogenase. This is the initial report of the gene structure and 5’ regulatory sequence of the short-chain acyl-CoA dehydrogenase gene in any species.
Similar content being viewed by others
References
Carter, M.E., Gulick, T., Moore, D.D., Kelly, D.P. (1994). A pleiotropic element in the medium-chain acyl-coenzyme A dehydrogenase gene promoter mediates transcriptional regulation by multiple nuclear receptor transcription factors and defines novel receptor-DNA binding motifs. Mol. Cell. Biol. 14, 4360–4372.
Davis, L.G., Dibner, M.D., Battey, J.F. (1986). Basic Methods in Molecular Biology. (New York: Elsevier Science Publishing Co., Inc.).
Feinberg, A.P., Vogelstein, B. (1983). A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity. Anal. Biochem. 132, 6–13.
Hinsdale, M.E., Kelly, C.L., Wood, P.A. (1993). Null allele at Bcd-1 locus in BALB/cByJ mice is due to a deletion in the short-chain acyl-CoA dehydrogenase gene and results in missplicing of mRNA. Genomics 16, 605–611.
Kelly, C.L., Hinsdale, M.E., Wood, P.A. (1993). Cloning and characterization of mouse short-chain acyl-CoA dehydrogenase cDNA. Genomics 18, 137–140.
Sambrook, J., Fritsch, E.F., Maniatis, T. (1989). Molecular Cloning: A Laboratory Manual. (Cold Spring Harbor, N.Y.: Cold Spring Harbor Laboratory Press).
Prochazka, M., Leiter, E.H. (1986). A null activity variant found at the butyryl CoA dehydrogenase (Bcd-1) locus in BALB/cByJ subline. Mouse News Lett. 75, 31.
Roe, C.R., Coates, P.M. (1995). Mitochondrial fatty acid oxidation disorders. In The Metabolic and Molecular Bases of Inherited Disease, C.R. Scriver, A.L. Beaudet, W.S. Sly, D. Valle, eds. (New York: McGraw-Hill, Inc.), pp. 1501–1533.
Sanger, F., Nicklen, S., Coulson, A.R. (1977). DNA sequencing with chain termination inhibitors. Proc. Natl. Acad. Sci. USA 75, 5463–5467.
Schiffer, S.P., Prochaska, M., Jezyk, P.F., Roderick, T.H., Yudhoff, M., Patterson, D.F. (1989). Organic aciduria and butryl CoA dehydrogenase deficiency in BALB/cByJ mice. Biochem. Genet. 27, 47–58.
Tolwani, R.J., Farmer, S.C., Kurtz, D.M., Johnson, K.R., Davisson, M.T., Hinsdale, M.E., Cresci, S., Kelly, D.P., Wood, P.A. (1996). Genepromoter structure and chromosomal location of the mouse mediumchain acyl-CoA dehydrogenase gene. Gene, in press.
Wood, P.A., Amendt, B.A., Rhead, W.J., Millington, D.S., Inoue, F., Armstrong, D. (1989). Short-chain acyl-coenzyme A dehydrogenase deficiency in mice. Pediatr. Res. 25, 38–43.
Author information
Authors and Affiliations
Rights and permissions
About this article
Cite this article
Kelly, C.L., Wood, P.A. Cloning and characterization of the mouse short-chain acyl-CoA dehydrogenase gene. Mammalian Genome 7, 262–264 (1996). https://doi.org/10.1007/s003359900078
Received:
Accepted:
Issue Date:
DOI: https://doi.org/10.1007/s003359900078