Abstract
The histone modifications usually form complicated networks to regulate accessibility of DNA and transcription. Identification of proteins that are involved in the crosstalk among different histone modifications will help to better understand the epigenetic regulatory network in eukaryotes. The Inhibitor of Growth (ING) proteins represent a tumor suppressor family were first linked to histone modification in yeast and their functions in epigenetic regulation were further characterized. This review summarizes the crosstalk of histone modification in fungi and describes recently achieved mechanistic insights into the role of Fng1 (an ING protein in filamentous ascomycetes) in this process. We conclude that Fng1 is involved in crosstalk among histone acetylation, deacetylation and methylation.
Similar content being viewed by others
References
Chen JQ, Li Y, Pan X, Lei BK, Chang C, Liu ZX, Lu H (2010) The fission yeast inhibitor of growth (ING) protein Png1p functions in response to DNA damage. J Biol Chem 285:15786–15793. https://doi.org/10.1074/jbc.M110.101832
Chittuluru JR, Chaban Y, Monnet-Saksouk J, Carrozza MJ, Sapountzi V, Selleck W, Huang JH, Utley RT, Cramet M, Allard S, Cai G, Workman JL, Fried MG, Tan S, Cote J, Asturias FJ (2011) Structure and nucleosome interaction of the yeast NuA4 and Piccolo-NuA4 histone acetyltransferase complexes. Nat Struct Mol Biol 18:1196. https://doi.org/10.1038/nsmb.2128
Connolly LR, Smith KM, Freitag M (2013) The Fusarium graminearum histone H3 K27 methyltransferase KMT6 regulates development and expression of secondary metabolite gene clusters. Plos Genet 9:e1003916. https://doi.org/10.1371/journal.pgen.1003916
Gong X, Yu Q, Duan K, Tong Y, Zhang X, Mei Q, Lu L, Yu X, Li S (2020) Histone acetyltransferase Gcn5 regulates gene expression by promoting the transcription of histone methyltransferase SET1. Biochim Biophys Acta Gene Regul Mech 1863:194603. https://doi.org/10.1016/j.bbagrm.2020.194603
He GHY, Helbing CC, Wagner MJ, Sensen CW, Riabowol K (2005) Phylogenetic analysis of the ING family of PHD finger proteins. Mol Biol Evol 22:104–116. https://doi.org/10.1093/molbev/msh256
Jiang H, Xia AL, Ye M, Ren JY, Li DG, Liu HQ, Wang QH, Lu P, Wu CL, Xu JR, Jiang C (2020) Opposing functions of Fng1 and the Rpd3 HDAC complex in H4 acetylation in Fusarium graminearum. Plos Genet 16:e1009185. https://doi.org/10.1371/journal.pgen.1009185
Kim JH, Yoon CY, Jun Y, Lee BB, Lee JE, Ha SD, Woo H, Choi A, Lee S, Jeong W, Kim JH, Kim T (2020) NuA3 HAT antagonizes the Rpd3S and Rpd3L HDACs to optimize mRNA and lncRNA expression dynamics. Nucleic Acids Res 48:10753–10767. https://doi.org/10.1093/nar/gkaa781
Loewith R, Meijer M, Lees-Miller SP, Riabowol K, Young D (2000) Three yeast proteins related to the human candidate tumor suppressor p33(ING1) are associated with histone acetyltransferase activities. Mol Cell Biol 20:3807–3816. https://doi.org/10.1128/Mcb.20.11.3807-3816.2000
Lu Y, Su C, Mao XM, PalaRaniga P, Liu HP, Chen JY (2008) Efg1-mediated recruitment of NuA4 to promoters is required for hypha-specific Swi/Snf binding and activation in Candida albicans. Mol Biol Cell 19:4260–4272. https://doi.org/10.1091/mbc.E08-02-0173
Ludwig S, Klitzsch A, Baniahmad A (2011) The ING tumor suppressors in cellular senescence and chromatin. Cell Biosci. https://doi.org/10.1186/2045-3701-1-25
Unoki M, Kumamoto K, Takenoshita S, Harris CC (2009) Reviewing the current classification of inhibitor of growth family proteins. Cancer Sci 100:1173–1179. https://doi.org/10.1111/j.1349-7006.2009.01183.x
Valencia-Sanchez MI, De Ioannes P, Wang M, Truong DM, Lee R, Armache JP, Boeke JD, Armache KJ (2021) Regulation of the Dot1 histone H3K79 methyltransferase by histone H4K16 acetylation. Science 371:eabc6663. https://doi.org/10.1126/science.abc6663
Vlaming H, McLean CM, Korthout T, Alemdehy MF, Hendriks S, Lancini C, Palit S, Klarenbeek S, Kwesi-Maliepaard EM, Molenaar TM, Hoekman L, Schmidlin TT, Altelaar AFM, van Welsem T, Dannenberg JH, Jacobs H, van Leeuwen F (2019) Conserved crosstalk between histone deacetylation and H3K79 methylation generates DOT1L-dose dependency in HDAC1-deficient thymic lymphoma. Embo J 3838:e101564. https://doi.org/10.15252/embj.2019101564
Yeheskely-Hayon D, Kotler A, Stark M, Hashimshony T, Sagee S, Kassir Y (2013) The roles of the catalytic and noncatalytic activities of Rpd3L and Rpd3S in the regulation of gene transcription in yeast. PLoS ONE 88:e85088. https://doi.org/10.1371/journal.pone.0085088
Acknowledgements
We thank Dr. Larry Dunkle, Professor Emeritus at Purdue University, for critical reading of this manuscript.
Funding
This work was supported by grants from New Star of Youth Science and Technology of Shaanxi Province (2018KJXX-068).
Author information
Authors and Affiliations
Contributions
CJ and JRX wrote the manuscript. MY, HJ and XF prepared the figure.
Corresponding author
Ethics declarations
Conflict of interest
The authors have declared that no competing interests exist.
Additional information
Communicated by Michael Polymenis.
Publisher's Note
Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
Rights and permissions
About this article
Cite this article
Ye, M., Jiang, H., Fu, X. et al. Fng1 is involved in crosstalk between histone acetylation and methylation. Curr Genet 67, 535–538 (2021). https://doi.org/10.1007/s00294-021-01167-2
Received:
Revised:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s00294-021-01167-2