Abstract
The mechanisms for the enhancement of pristinamycin production in the high-yielding recombinants of Streptomyces pristinaespiralis obtained by genome shuffling were investigated by quantitative real-time PCR (Q-PCR) and amplified fragment length polymorphism (AFLP) techniques. Q-PCR analysis showed that snaB and snbA involved, respectively, in the biosynthesis of pristinamycins II and I component had more extended high expression in the recombinant than that in the ancestor during fermentation process, indicating their expression changes might be key factors during the biosynthesis of the antibiotic. In addition, the antecedent establishment of the high self-resistance to pristinamycin, because ptr resistance gene started high-level expression ahead of the onset of the antibiotic production in the recombinant, might also lead to the increase of the antibiotics yield. AFLP analysis of these recombinants revealed genome variation of two novel genes, the homologs of AfsR regulatory gene and transposase gene, indicating these two gene variations were probably responsible for yield improvement of pristinamycin. This study provided several potential molecular clues for pristinamycin yield enhancement.
Similar content being viewed by others
References
Bai L, Li L, Xu H, Minagawa K, Yu Y, Zhang Y, Zhou X, Floss HG, Mahmud T, Deng Z (2006) Functional analysis of the validamycin biosynthetic gene cluster and engineered production of validoxylamine A. Chem Biol 13:387–397
Baltz RH (1998) Genetic manipulation of antibiotic-producing Streptomyces. Trends Microbiol 6:76–83
Bamas-Jacques N, Lorenzon S, Lacroix P, De Swetschin C, Crouzet J (1999) Cluster organization of the genes of Streptomyces pristinaespiralis involved in pristinamycin biosynthesis and resistance elucidated by pulsed-field gel electrophoresis. J Appl Microbiol 87:939–948
bdel-Hamid ME, Phillips OA (2003) LC-MS/MS determination of synercid injections. J Pharm Biomed Anal 32:1167–1174
Blanc V, Lagneaux D, Didier P, Gil P, Lacroix P, Crouzet J (1995) Cloning and analysis of structural genes from Streptomyces pristinaespiralis encoding enzymes involved in the conversion of pristinamycin IIB to pristinamycin IIA (PIIA): PIIA synthase and NADH:riboflavin 5′-phosphate oxidoreductase. J Bacteriol 177:5206–5214
Blanc V, Salah-Bey K, Folcher M, Thompson CJ (1995) Molecular characterization and transcriptional analysis of a multidrug resistance gene cloned from the pristinamycin-producing organism, Streptomyces pristinaespiralis. Mol Microbiol 17:989–999
Chater KF (1990) The improving prospects for yield increase by genetic engineering in antibiotic-producing Streptomycetes. Biotechnology (N Y) 8:115–121
Cocito C (1979) Antibiotics of the virginiamycin family, inhibitors which contain synergistic components. Microbiol Rev 43:145–192
Cocito C, Chinali G (1985) Molecular mechanism of action of virginiamycin-like antibiotics (synergimycins) on protein synthesis in bacterial cell-free systems. J Antimicrob Chemother 16(Suppl A):35–52
Crecy-Lagard V, Blanc V, Gil P, Naudin L, Lorenzon S, Famechon A, Bamas-Jacques N, Crouzet J, Thibaut D (1997) Pristinamycin I biosynthesis in Streptomyces pristinaespiralis: molecular characterization of the first two structural peptide synthetase genes. J Bacteriol 179:705–713
Floriano B, Bibb M (1996) afsR is a pleiotropic but conditionally required regulatory gene for antibiotic production in Streptomyces coelicolor A3(2). Mol Microbiol 21:385–396
Folcher M, Gaillard H, Nguyen LT, Nguyen KT, Lacroix P, Bamas-Jacques N, Rinkel M, Thompson CJ (2001) Pleiotropic functions of a Streptomyces pristinaespiralis autoregulator receptor in development, antibiotic biosynthesis, and expression of a superoxide dismutase. J Biol Chem 276:44297–44306
Hopwood DA (2007) How do antibiotic-producing bacteria ensure their self-resistance before antibiotic biosynthesis incapacitates them? Mol Microbiol 63:937–940
Hopwood DA, Bibb MJ, Chater KF, Kieser T, Bruton CJ, Kieser HM, Lydiate DJ, Smith CP, Ward JM, Schrempf H (1985) Genetic Manipulation of Streptomyces: A Laboratory Manual. The John Innes Foundation, Norwich
Jia B, Jin ZH, Lei YL, Mei LH, Li NH (2006) Improved production of pristinamycin coupled with an adsorbent resin in fermentation by Streptomyces pristinaespiralis. Biotechnol Lett 28:1811–1815
Jin Q, Jin Z, Xu B, Wang Q, Lei Y, Yao S, Cen P (2008) Genomic variability among high pristinamycin-producing recombinants of Streptomyces pristinaespiralis revealed by amplified fragment length polymorphism. Biotechnol Lett 30:1423–1429
Jin Q, Yin H, Hong X, Jin Z (2012) Isolation and functional analysis of spy1 responsible for pristinamycin yield in Streptomyces pristinaespiralis. J Microbiol Biotechnol 22:793–799
Jin Z, Jin X, Jin Q (2010) Conjugal transferring of resistance gene ptr for improvement of pristinamycin-producing Streptomyces pristinaespiralis. Appl Biochem Biotechnol 160:1853–1864
Jin Z, Lei Y, Lin J, Cen P (2005) Improvement of pristinamycin-producing Streptomyces pristinaespiralis by rational screening. World J Microbiol Biotechnol 22:129–134
Paradkar A, Trefzer A, Chakraburtty R, Stassi D (2003) Streptomyces genetics: a genomic perspective. Crit Rev Biotechnol 23:1–27
Sezonov G, Blanc V, Bamas-Jacques N, Friedmann A, Pernodet JL, Guerineau M (1997) Complete conversion of antibiotic precursor to pristinamycin IIA by overexpression of Streptomyces pristinaespiralis biosynthetic genes. Nat Biotechnol 15:349–353
Weaden J, Dyson P (1998) Transposon mutagenesis with IS6100 in the avermectin-producer Streptomyces avermitilis. Microbiology 144(Pt 7):1963–1970
Zhang YX, Perry K, Vinci VA, Powell K, Stemmer WP, del Cardayre SB (2002) Genome shuffling leads to rapid phenotypic improvement in bacteria. Nature 415:644–646
Acknowledgments
The work was financially supported by National Natural Science Foundation of China (No. 20976161), Natural Science Foundation of Zhejiang Province, China (No. Y4100123), Natural Science Foundation of Ningbo City, China (No. 2010A610023), and the Scientific Research Launching Foundation for Introduced Talents of Ningbo Institute of Technology, Zhejiang University (No. 1141757G905).
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Jin, Q., Jin, Z., Zhang, L. et al. Probing the Molecular Mechanisms for Pristinamycin Yield Enhancement in Streptomyces pristinaespiralis . Curr Microbiol 65, 792–798 (2012). https://doi.org/10.1007/s00284-012-0233-1
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s00284-012-0233-1