Antelmann H, Tjalsma H, Voigt B, Ohlmeier S, Bron S, van Dijl JM, Hecker M (2001) A proteomic view on genome–based signal peptide predictions. Genome Res 11:1484–1502
Article
CAS
Google Scholar
Bradford MM (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein–dye binding. Anal Biochem 72:248–254
Article
CAS
Google Scholar
Emanuelsson O, Brunak S, von Heijne G, Nielsen H (2007) Locating proteins in the cell using TargetP, SignalP and related tools. Nat Protoc 2:953–971
Article
CAS
Google Scholar
Garcia JL (1985) Cloning in Escherichia coli and molecular analysis of the sucrose system of the Salmonella plasmid SCR-53. Mol Gen Genet 201:575–577
Article
CAS
Google Scholar
Hirose I, Sano K, Shioda I, Kumano M, Nakamura K, Yamane K (2000) Proteome analysis of Bacillus subtilis extracellular proteins: a two-dimensional protein electrophoretic study. Microbiology 146:65–75
CAS
Google Scholar
Hovatta O, Silye R, Krausz T, Abir R, Margara R, Trew G, Lass A, Winston RM (1996) Cryopreservation of human ovarian tissue using dimethylsulphoxide and propanediol–sucrose as cryoprotectants. Hum Reprod 11:1268–1272
CAS
Google Scholar
Jahreis K, Bentler L, Bockmann J, Hans S, Meyer A, Siepelmeyer J, Lengeler JW (2002) Adaptation of sucrose metabolism in the Escherichia coli wild-type strain EC3132. J Bacteriol 184:5307–5316
Article
CAS
Google Scholar
Jeffery CJ (2003) Moonlighting proteins: old proteins learning new tricks. Trends Genet 19:415–417
Article
CAS
Google Scholar
Kilimann KV, Doster W, Vogel RF, Hartmann C, Ganzle MG (2006) Protection by sucrose against heat-induced lethal and sublethal injury of Lactococcus lactis: an FT-IR study. Biochim Biophys Acta 1764:1188–1197
CAS
Google Scholar
Kim JM, Lee KH, Lee SY (2008) Development of a markerless gene knock-out system for Mannheimia succiniciproducens using a temperature–sensitive plasmid. FEMS Microbiol Lett 278:78–85
Article
CAS
Google Scholar
Koutinas AA, Wang R, Webb C (2004) Evaluation of wheat as generic feedstock for chemical production. Ind Crop Prod 20:75–88
Article
CAS
Google Scholar
Lee JW, Lee SY, Song H, Yoo JS (2006a) The proteome of Mannheimia succiniciproducens, a capnophilic rumen bacterium. Proteomics 6:3550–3566
Article
CAS
Google Scholar
Lee SJ, Song H, Lee SY (2006b) Genome-based metabolic engineering of Mannheimia succiniciproducens for succinic acid production. Appl Environ Microbiol 72:1939–1948
Article
CAS
Google Scholar
Lee KH, Park JH, Kim TY, Kim HU, Lee SY (2007) Systems metabolic engineering of Escherichia coli for l-threonine production. Mol Syst Biol 3:149
Article
CAS
Google Scholar
Li M, Rosenshine I, Tung SL, Wang XH, Friedberg D, Hew CL, Leung KY (2004) Comparative proteomic analysis of extracellular proteins of enterohemorrhagic and enteropathogenic Escherichia coli strains and their ihf and ler mutants. Appl Environ Microbiol 70:5274–5282
Article
CAS
Google Scholar
Molina-Hoppner A, Doster W, Vogel RF, Ganzle MG (2004) Protective effect of sucrose and sodium chloride for Lactococcus lactis during sublethal and lethal high-pressure treatments. Appl Environ Microbiol 70:2013–2020
Article
CAS
Google Scholar
Ould-Moulaye CB, Dussap CG, Gros JB (1999) Estimation of Gibbs energy changes of central metabolism reactions. Biotechnol Tech 13:187–193
Article
CAS
Google Scholar
Park JH, Lee KH, Kim TY, Lee SY (2007) Metabolic engineering of Escherichia coli for the production of L-valine based on transcriptome analysis and in silico gene knockout simulation. Proc Natl Acad Sci USA 104:7797–7802
Article
CAS
Google Scholar
Prestrelski SJ, Tedeschi N, Arakawa T, Carpenter JF (1993) Dehydration-induced conformational transitions in proteins and their inhibition by stabilizers. Biophys J 65:661–671
Article
CAS
Google Scholar
Qian ZG, Xia XX, Lee SY (2009) Metabolic engineering of Escherichia coli for the production of putrescine: a four carbon diamine. Biotechnol Bioeng 104:651–662
CAS
Google Scholar
Reid SJ, Abratt VR (2005) Sucrose utilisation in bacteria: genetic organisation and regulation. Appl Microbiol Biotechnol 67:312–321
Article
CAS
Google Scholar
Renouf MA, Wegener MK, Nielsen LK (2008) An environmental life cycle assessment comparing Australian sugarcane with US corn and UK sugar beet as producers of sugars for fermentation. Biomass Bioenergy 32:1144–1155
Article
CAS
Google Scholar
Roy I, Gupta MN (2004) Freeze-drying of proteins: some emerging concerns. Biotechnol Appl Biochem 39:165–177
Article
CAS
Google Scholar
Sahin-Toth M, Lengyel Z, Tsunekawa H (1999) Cloning, sequencing, and expression of cscA invertase from Escherichia coli B-62. Can J Microbiol 45:418–422
Article
CAS
Google Scholar
Sambrook JRD (2001) Molecular cloning: a laboratory manual. Cold Spring Harbor Lab Press, Cold Spring Harbor
Google Scholar
Schmid K, Schupfner M, Schmitt R (1982) Plasmid-mediated uptake and metabolism of sucrose by Escherichia coli K-12. J Bacteriol 151:68–76
CAS
Google Scholar
Schmid K, Ebner R, Altenbuchner J, Schmitt R, Lengeler JW (1988) Plasmid-mediated sucrose metabolism in Escherichia coli K12: mapping of the scr genes of pUR400. Mol Microbiol 2:1–8
Article
CAS
Google Scholar
Scholle RR, Coyne VE, Maharaj R, Robb FT, Woods DR (1987) Expression and regulation of a Vibrio alginolyticus sucrose utilization system cloned in Escherichia coli. J Bacteriol 169:2685–2690
CAS
Google Scholar
Scholle RR, Steffen HE, Goodman HJ, Woods DR (1990) Expression and regulation of a Bacteroides fragilis sucrose utilization system cloned in Escherichia coli. Appl Environ Microbiol 56:1944–1948
CAS
Google Scholar
Sprenger GA, Lengeler JW (1988) Analysis of sucrose catabolism in Klebsiella pneumoniae and in Scr + derivatives of Escherichia coli K12. J Gen Microbiol 134:1635–1644
CAS
Google Scholar
Tsunekawa H, Azuma S, Okabe M, Okamoto R, Aiba S (1992) Acquisition of a sucrose utilization system in Escherichia coli K-12 derivatives and its application to industry. Appl Environ Microbiol 58:2081–2088
CAS
Google Scholar
Van Opstal I, Vanmuysen SC, Michiels CW (2003) High sucrose concentration protects E. coli against high pressure inactivation but not against high pressure sensitization to the lactoperoxidase system. Int J Food Microbiol 88:1–9
Article
CAS
Google Scholar
Vizcaino C, Restrepo-Montoya D, Rodriguez D, Nino LF, Ocampo M, Vanegas M, Reguero MT, Martinez NL, Patarroyo ME, Patarroyo MA (2010) Computational prediction and experimental assessment of secreted/surface proteins from mycobacterium tuberculosis H37Rv. PLoS Comput Biol 6:e1000824
Article
CAS
Google Scholar
Wohlhieter JA, Lazere JR, Snellings NJ, Johnson EM, Synenki RM, Baron LS (1975) Characterization of transmissible genetic elements from sucrose-fermenting Salmonella strains. J Bacteriol 122:401–406
CAS
Google Scholar
Xia XX, Han MJ, Lee SY, Yoo JS (2008) Comparison of the extracellular proteomes of Escherichia coli B and K-12 strains during high cell density cultivation. Proteomics 8:2089–2103
Article
CAS
Google Scholar