Abstract
Variable lymphocyte receptors (VLR) generate enormous diversity through assembling highly diverse leucine-rich repeat (LRR) modules and presumably function as antigen receptors in jawless vertebrates. The hagfish, which constitute major extant members of jawless vertebrates along with lampreys, have two VLR genes designated VLRA and VLRB, whereas only a single VLR gene has been identified in the lamprey. In the present study, we show by fluorescence in situ hybridization (FISH) that hagfish VLRA and VLRB are located on the same chromosome, but are far apart from each other. Analysis of available inshore hagfish complementary DNA sequences indicates that VLRA and VLRB do not share a LRR module with an identical nucleotide sequence. Physical separation of VLRA and VLRB is consistent with this observation and indicates that the two VLR genes function as separate units. The FISH protocol developed in this study should be useful for the analysis of the agnathan genome.

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Acknowledgment
We thank Dr. Hideyuki Tanabe, Department of Biosystems Science, School of Advanced Sciences, the Graduate University for Advanced Studies (Sokendai), for his valuable advice on the FISH protocol, and Ms. Kayano, Sekikatsu, for the supply of hagfish. This work was supported by grants-in-aid for scientific research from the Ministry of Education, Culture, Sports, Science and Technology of Japan. J. K. is supported by the research fellowship for Young Scientists from the Japan Society for the Promotion of Science.
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J. K. is a research fellow of the Japan Society for the Promotion of Science.
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Kasamatsu, J., Suzuki, T., Ishijima, J. et al. Two variable lymphocyte receptor genes of the inshore hagfish are located far apart on the same chromosome. Immunogenetics 59, 329–331 (2007). https://doi.org/10.1007/s00251-007-0200-3
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DOI: https://doi.org/10.1007/s00251-007-0200-3