References
Kent WJ, Sugnet CW, Furey TS et al (2002) The human genome browser at UCSC. Genome Res 12:996–1006
Knowles DG, McLysaght A (2009) Recent do novo origin of human protein-coding genes. Genome Res 19:1752–1759
Li H, Handsaker B, Wysoker A et al (2009) The Sequence Alignment/Map (SAM) format and SAMtools. Bioinformatics 25:2078–2079
Lynch M, Conery JS (2000) The evolutionary fate and consequences of duplicate genes. Science 290:1151–1155
Meyer M, Kircher M, Gansauge M-T (2012) A high-coverage genome sequence from an archaic Denisovan individual. Science 338:222–226
Ohno S (1970) Evolution by Gene Duplication. Springer, New York
Prüfer K, Racimo F, Patterson N et al (2013) The complete genome sequence of a Neanderthal from the Altai Mountains. Nature 501:43–49
Reich D, Green RE, Kircher J et al (2010) Genetic history of an archaic hominin group from Denisova Cave in Siberia. Nature 468:1053–1060
Sankararaman S, Maillick S, Dannemann M et al (2014) The genomic landscape of Neanderthal ancestry in present-day humans. Nature 507:354–357
Taylor JS, Raes J (2004) Duplication and divergence: the evolution of new genes and old ideas. Annu Rev Genet 38:615–643
Wu DD, Irwin DM, Zhang Y-P (2011) De novo origin of human protein-coding genes. PLoS Genet 7(11):e1002379
Xie C, Zhang YE, Chen J-Y et al (2012) Hominoid-specific de novo protein-coding genes originating from long non-coding RNAs. PLoS Genet 8(9):e1002942
Zhao L, Saelao P, Jones CD, Begun DJ (2014) Origin and spread of de novo genes in Drosophila melanogaster populations. Science 343:769–772
Acknowledgments
The author thanks Dr. Belaid Moa of Compute Canada/WestGrid for considerable assistance and two anonymous referees for their review of the first version of this paper.
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Taylor, J.S. Did Neanderthals and Denisovans have Our De Novo Genes?. J Mol Evol 78, 321–323 (2014). https://doi.org/10.1007/s00239-014-9628-x
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s00239-014-9628-x