Gating and Permeation in Ion Channels Formed by Gramicidin A and Its Dioxolane-linked Dimer in Na⁺ and Cs⁺ Solutions

Abstract.

The association of two gramicidin A (gA) peptides via H-bonds in lipid bilayers causes the formation of an ion channel that is selective for monovalent cations only. In this study, two gAs were covalently linked with a dioxolane group (SS dimer). Some functional properties of natural gA channels were compared to that synthetic dimer in Na⁺- or Cs⁺-containing solutions. The SS dimer remained in the open configuration most of the time, while natural gA channels had a relatively brief mean open time. Single channel conductances to Na⁺ (g _Na ) or Cs⁺ (g _Cs ) in the SS dimer were smaller than in natural gA. However, g _Na was considerably more attenuated than g _Cs . This probably results from a tight solvation of Na⁺ by the dioxolane linker in the SS channel. In Cs⁺ solutions, the SS had frequent closures. By contrast, in Na⁺ solutions the synthetic dimer remained essentially in the open state. The mean open times of SS channels in different solutions (T _open,Na > T _open,Cs > T _open,H ) were inversely proportional to the single channel conductances (g _H > g _Cs > g _Na ). This suggests that ion occupancy inside the pore stabilizes the open configuration of the gA dimer. The mean closed time of the SS dimer was longer in Cs⁺ than in H⁺ solutions. Possible mechanisms for these effects are discussed.