Marine Biology

, Volume 152, Issue 1, pp 119–128 | Cite as

Genetic structuring of Latris lineata at localized and transoceanic scales

  • Sean R. Tracey
  • Adam Smolenski
  • Jeremy M. Lyle
Research Article


Striped trumpeter (Latris lineata) is a demersal teleost distributed around the temperate clines of all the major oceans in the southern hemisphere. Within Tasmanian waters the species is managed as a single stock, although no studies have been performed to confirm genetic panmixia. A protracted pelagic larval phase and a recent transoceanic tag recapture of an adult fish suggest significant potential for genetic mixing between widely separated populations. Phylogenetic analysis of mitochondrial DNA control region sequences suggested no genetic mixing between Tasmania, New Zealand and St Paul/Amsterdam Islands, evidence for the first time that there is population structure at a transoceanic scale for this species. In addition, an analysis of molecular variance coupled with phylogenetic analyses suggested no significant structuring of striped trumpeter from three locations around Tasmania. The information provided in this study is useful for the design of modern fisheries management techniques such as spatially implemented marine reserves. In addition, species-by-species knowledge about population structures of marine species facilitates ecologically useful generalizations concerning their population dynamics and key issues on the broader ecology of the oceans.


Larval Dispersal Control Region Sequence Larval Phase Pelagic Larval Duration Zealand Population 
These keywords were added by machine and not by the authors. This process is experimental and the keywords may be updated as the learning algorithm improves.



The authors gratefully acknowledge Peter Smith, Clive Roberts and Margaret McVeagh for providing tissue samples from New Zealand, Guy Duhamel for providing samples from St Paul/Amsterdam Islands and the assistance of the captain and crew of FRV Challenger for assisting in the collection of samples from Tasmania. We also thank Alistair Hobday and two anonymous referees for providing constructive comments for this manuscript. The procedures used in this study were conducted with ethics approval from the University of Tasmania’s Animal Ethics Committee (project no. A0007999).


  1. Aboim MA, Menezes GM, Schlitt T, Rodgers AD (2005) Genetic structure and history of populations of the deep-sea fish Helicolenus dactylopterus (Delaroche, 1809) inferred from mtDNA sequence analysis. Mol Ecol 14:1343–1354PubMedCrossRefGoogle Scholar
  2. Andrew TG, Hecht T, Heemstra PC, Lutjeharms JRE (1995) Fishes of the Tristan Da Cunha group and Gough Island, South Atlantic Ocean. Ichthyol Bull 63:1–41Google Scholar
  3. Alvarado Bremer JR, Baker AJ, Mejuto J (1995) Mitochondrial DNA control region sequences indicate extensive mixing of swordfish (Xiphias gladius) populations in the Atlantic Ocean. Can J Fish Aquat Sci 52:1720–1732Google Scholar
  4. Avise JC, Alisauskas RT, Nelson WS, Davison AC (1992) Matriarchal population genetic structure in an avian species with female natal philopatry. Evolution 46:1084–1096CrossRefGoogle Scholar
  5. Booth JD (1986) Recruitment of Packhorse Rock Lobster Jasus verreauxi in New Zealand. Can J Fish Aquat Sci 43:2212–2220CrossRefGoogle Scholar
  6. Booth JD, Phillips BF (1994) Early life history of spiny lobster. Crustaceana 66:271–294Google Scholar
  7. Bradford RW, Bruce, Stephen BD, Chiswell M, Booth JD, Jeffs A, Wotherspoon S (2005) Vertical distribution and diurnal migration patterns of Jasus edwardsii phyllosomas off the east coast of the North Island, New Zealand. NZ J Mar Freshw Res 39:593–604CrossRefGoogle Scholar
  8. Brasher DJ, Ovenden JR, Booth JD, White RWG (1992) Genetic subdivision of Australian and New Zealand populations of Jasus verreauxi (Decapodia: Palinuridae)–preliminary evidence from the mitochondrial genome. NZ J Mar Freshw Res 26:53–58CrossRefGoogle Scholar
  9. Burridge CP, White RWG (2000) Molecular phylogeny of the antitropical subgenus Goniistius (Perciformes:Cheilodactylidae:Cheilodactylus): evidence for multiple transequatorial divergences and non-monophyly. Bio J Linn Soc 70(3):435–458CrossRefGoogle Scholar
  10. Chiswell SM, Wilkin J, Booth JD, Stanton B (2003) Trans-Tasman sea larvel transport: Is Australia a source for New Zealand rock lobsters? Mar Ecol Prog Ser 247:173–182Google Scholar
  11. Collette BB, Parin NV (1991) Shallow-water fishes of Walters shoals, Madagascar ride. Bull Mar Sci 48:1–22Google Scholar
  12. Cowen RB, Paris CB, Srinivasan A (2006) Scaling of connectivity in marine populations. Science 311:522–527PubMedCrossRefGoogle Scholar
  13. Creasey S, Rogers AD (1999) Population genetics of bathyal and abyssal organisms. Adv Mar Biol 35:1–151Google Scholar
  14. Cresswell G, Wells G, Petersen J (1994) Australian satellite tracked drifters 1991-1994. Report to Fisheries Research and Development Corporation. CSIRO, HobartGoogle Scholar
  15. Dudgeon CL, Gust N, Blair D (2000) No apparent genetic basis to demographic differences in scarid fishes across continental shelf of the Great Barrier Reef. Mar Biol 137:1059–1066CrossRefGoogle Scholar
  16. Duhamel G (1997) L’ichtyofaunes des îles australes françaises de l’océan Indien. Cybium 21(Suppl 1):147–168Google Scholar
  17. Duhamel G (1989) Ichtyofaune des îles Saint-paul ét Amsterdam (Océan Indien sud). Mésogée 49:21–47Google Scholar
  18. Excoffier L, Smouse PE, Quattro JM (1992) Analysis of molecular variance inferred from metric distances and DNA haplotypes; application to human mitochondrial DNA restriction data. Genetics 131:479–491PubMedGoogle Scholar
  19. Furlani DM, Ruwald FP (1999) Egg and larval development of laboratory-reared striped trumpeter Latris lineata (Forster in Bloch and Schneider 1801) (Percoidei: Latridiidae) from Tasmanian waters. NZ J Mar Freshwater Res 33:16–83Google Scholar
  20. Grewe PM, Smolenski AJ, Ward RD (1994) Mitochondrial DNA variation in jackass morwong, Nemadactylus macropterus (Teleostei: Cheilodactylidae) from Australian and New Zealand waters. Can J Fish Aquat Sci 51:1101–1109CrossRefGoogle Scholar
  21. Hall TA (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Res Symp Ser 41:95–98Google Scholar
  22. Higgins D, Thompson J, Gibson T, Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22:4673–4680PubMedCrossRefGoogle Scholar
  23. Kailola PJ, Williams MJ, Stewart PC, Reichelt RE, McNee A, Grieve C (1993) Australian fisheries resources. Bureau of Resource Sciences, Department of Primary Industries and Energy, and the Fisheries Research and Development Corporation, CanberraGoogle Scholar
  24. Kingsford MJ, Schiel DR, Battershill CN (1989) Distribution and abundance of fish in a rocky reef environment at the subantarctic Auckland Islands, New Zealand. Pol Biol 9:179–186CrossRefGoogle Scholar
  25. Kocher TD, Thomas WK, Meyer A, Edwards SV, Pääbo S, Villablanca FX, Wilson AC (1989) Dynamics of mitochondrial DNA evolution in animals: amplification and sequencing with conserved primers. Proc Natl Acad Sci USA 86:6196–6200PubMedCrossRefGoogle Scholar
  26. Kumar S, Tamura K, Jakobsen IB, Nei M (2001) MEGA2: molecular evolutionary genetics analysis software. Bioinformatics 17:1244–1245PubMedCrossRefGoogle Scholar
  27. Lanave C, Preparata G, Saccone C, Serio G (1984) A new method for calculating evolutionary substitution rates. J Mol Evol 20:86–93PubMedCrossRefGoogle Scholar
  28. Last PR, Scott EOG, Talbot FH (1983) Fishes of Tasmania. Tasmanian Fisheries Development Authority, HobartGoogle Scholar
  29. Nei M (1987) Molecular evolutionary genetics. Columbia University Press, New YorkGoogle Scholar
  30. Nei M, Tajima F (1981) DNA polymorphism detectable by restriction endonucleases. Genetics 97:145–163PubMedGoogle Scholar
  31. Nylander JAA (2004) MrModeltest 2.1. Program distributed by the author. Evolutionary Biology Centre, Uppsala UniversityGoogle Scholar
  32. Ovenden JR, Brasher DJ, White RWG (1992) Mitochondrial DNA analyses of the red rock lobster Jasus edwardsii supports an apparent absence of population subdivision throughout Australasia. Mar Biol 112:319–326CrossRefGoogle Scholar
  33. Roberts CD (2003) A new species of trumpeter (Teleostei: Percomorpha; Latridae) from the central South Pacific Ocean, with a taxonomic review of the striped trumpeter Latris lineata. J Roy Soc NZ 33(4):731–754Google Scholar
  34. Rogers AD (2003) Molecular ecology and evolution of slope species. In: Wefer G, Billett D, Hebbeln D, Jørgensen B, Schlüter M, Van Weering T (eds) Ocean margin systems, Springer, Berlin, pp 323–337Google Scholar
  35. Saitou N, Nei M. (1987) The neighbor-joining method; a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406–425PubMedGoogle Scholar
  36. Schneider S, Roessli D, Excoffier L (2000) Arlequin: a software for population genetics data analysis. Genetics and Biometry Laboratory, University of Geneva, GenevaGoogle Scholar
  37. Swofford DL (2002) PAUP* ver 4.0b10. Phylogenetic analysis using parsimony and other methods. Sinauer Associates, SunderlandGoogle Scholar
  38. Tamura K, Nei M (1993) Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Mol Biol Evol 10:512–526PubMedGoogle Scholar
  39. Thresher RE, Proctor CH, Gunn JS, Harrowfield IR (1994) An evaluation of electron-probe microanalysis of otoliths for stock delineation and identification of nursery areas in a southern temperate groundfish, Nemadactylus macropterus (Cheilodactylidae). Fish Bull 92: 817–840Google Scholar
  40. Tracey SR, Lyle JM, Duhamel G (2006) Application of elliptical Fourier analysis of otolith form as a tool for stock identification. Fish Res 77(2):138–147CrossRefGoogle Scholar
  41. Tracey SR, Lyle JM, Haddon M (2007) Reproductive biology and per-recruit analyses of striped trumpeter (Latris lineata) from Tasmania, Australia: implications for management. Fish Res. doi:10.1016/j.fishres.2006.11.025Google Scholar
  42. Utter FM (1991) Biochemical genetics and fisheries management: an historical perspective. J Fish Biol 39:1–20CrossRefGoogle Scholar
  43. Waples RS (1998) Separating the wheat from the chaff: patterns of genetic differentiation in high gene flow species. J Heredity 89:438–450CrossRefGoogle Scholar
  44. Wakeley J (1993) Substitution rate variation among sites in hypervariable region 1 of human mitochondrial DNA. J Mol Evol 37:613–623PubMedCrossRefGoogle Scholar
  45. Wenink PW, Baker AJ, Tilanus MGJ (1994) Mitochondrial control region sequences in two shorebird species, the turnstone and the dunlin, and their utility in population genetic studies. Mol Biol Evol 2:22–31Google Scholar
  46. Xia X, Xie Z (2001) DAMBE: data analysis in molecular biology and evolution. J Hered 92:371–373PubMedCrossRefGoogle Scholar

Copyright information

© Springer-Verlag 2007

Authors and Affiliations

  • Sean R. Tracey
    • 1
  • Adam Smolenski
    • 2
  • Jeremy M. Lyle
    • 1
  1. 1.Tasmanian Aquaculture and Fisheries InstituteUniversity of TasmaniaHobartAustralia
  2. 2.Central Science LaboratoryUniversity of TasmaniaHobartAustralia

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