Abstract
The biocatalytic cascade based on enzyme-catalyzed reactions activated by several biomolecular input signals and producing output signal after each reaction step was developed as an example of a logically reversible information processing system. The model system was designed to mimic the operation of concatenated AND logic gates with optically readable output signals generated at each step of the logic operation. Implications include concurrent bioanalyses and data interpretation for medical diagnostics.
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References
Katz E (ed) (2012) Biomolecular computing—from logic systems to smart sensors and actuators. Willey, Weinheim
Katz E, Privman V (2010) Chem Soc Rev 39:1835–1857
Katz E (ed) (2012) Molecular and supramolecular information processing—from molecular switches to unconventional computing. Willey, Weinheim
De Silva AP, Uchiyama S, Vance TP, Wannalerse B (2007) Coord Chem Rev 251:1623–1632
Calude CS, Costa JF, Dershowitz N, Freire E, Rozenberg G (eds) (2009) Unconventional computation. Lecture notes in computer science, vol 5715. Springer, Berlin
Unger R, Moult J (2006) Proteins 63:53–64
Ezziane Z (2006) Nanotechnology 17:R27–R39
Stojanovic MN, Mitchell TE, Stefanovic D (2002) J Am Chem Soc 124:3555–3561
Li Z, Rosenbaum MA, Venkataraman A, Tam TK, Katz E, Angenent LT (2011) Chem Commun 47:3060–3062
Benenson Y (2009) Mol BioSyst 5:675–685
Adar R, Benenson Y, Linshiz G, Rosner A, Tishby N, Shapiro E (2004) Proc Natl Acad Sci U S A 101:9960–9965
Katz E, Wang J, Privman M, Halámek J (2012) Anal Chem 84:5463–5469
Kahan M, Gil B, Adar R, Shapiro E (2008) Physica D 237:1165–1172
Halámková L, Halámek J, Bocharova V, Wolf S, Mulier KE, Beilman G, Wang J, Katz E (2012) Analyst 137:1768–1770
Garipelly R, Kiran PM, Kumar AS (2013) Int J Emerg Technol Adv Eng 3:417–423
Orbach R, Remacle F, Levine RD, Willner I (2012) Proc Natl Acad Sci U S A 109:21228–21233
Klein JP, Leete TH, Rubin H (1999) Biosystems 52:15–23
Remon P, Ferreira R, Montenegro J-M, Suau R, Perez-Inestrosa E, Pischel U (2009) ChemPhysChem 10:2004–2007
Sigma Chemical Company (1991) Bioluminescent determination of ATP with luciferase-luciferin. Technical bulletin no. BL-100. http://www.sigmaaldrich.com/content/dam/sigma-aldrich/docs/Sigma/Bulletin/fle1000bul.pdf
Meisenheimer PL, O’Brien MA, Cali JJ (2008) Promega Notes 100:22–26
Pütter J, Becker R (1983) In: Bergmeyer HU (ed) Methods of enzymatic analysis, vol III, 3rd edn. Chemie, Deerfield Beach, pp 286–293
Acknowledgments
This work was supported by the NSF award #CBET-1066397 (Clarkson University) and by Grant No. EB014586 (Univ. of CT) from the National Institute of Biomedical Imaging and Bioengineering (NIBIB), NIH.
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Guz, N., Halámek, J., Rusling, J.F. et al. A biocatalytic cascade with several output signals—towards biosensors with different levels of confidence. Anal Bioanal Chem 406, 3365–3370 (2014). https://doi.org/10.1007/s00216-014-7789-5
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DOI: https://doi.org/10.1007/s00216-014-7789-5