Skip to main content

A generic sandwich-type biosensor with nanomolar detection limits

Abstract

A quantitative and highly sensitive, yet simple and rapid, biosensor system was developed for the detection of nucleic acid sequences that can also be adapted to the detection of antigens. A dipstick-type biosensor with liposome amplification, based on a sandwich assay format with optical detection, was combined with a simple coupling reaction that allows the transformation of the generic biosensor components to target specific ones by a mere incubation step. This biosensor platform system was developed and optimized, and its principle was proven using DNA oligonucleotides that provided a nucleic acid biosensor for the specific detection of RNA and DNA sequences. However, the coupling reaction principle chosen can also be used for the immobilization of antibodies or receptor molecules, and therefore for the development of immunosensors and receptor-based biosensors. The generic biosensor consists of liposomes entrapping sulforhodamine B that are coated with streptavidin on the outside, and polyethersulfone membranes with anti-fluorescein antibodies immobilized in the detection zone. In order to transform the generic biosensor into a specific DNA/RNA biosensor, two oligonucleotides that are able to hybridize to the target sequence were labeled with a biotin and a fluorescein molecule, respectively. By simultaneously incubating the liposomes, both oligonucleotides, and the target sequence in a hybridization buffer for 20–30 min at 42 °C, a sandwich complex was formed. The mixture was applied to the polyethersulfone membrane. The complex was captured in the detection zone and quantified using a handheld reflectometer. The system was tested using RNA sequences from B. anthracis, C. parvum and E. coli. Quantitation of concentrations between 10 fmol and 1000 fmol (10–1000 nM) was possible without altering any biosensor assay conditions. In addition, no changes to hybridization conditions were required when using authentic nucleic acid sequence-based amplified RNA sequences, and the generic biosensor compared favorably with those previously developed specifically for the RNA sequences. Therefore, the universal biosensor described is an excellent tool, for use in laboratories or at test sites, for rapidly investigating and quantifying any nucleic acid sequence of interest, as well as potentially any antigen of interest that can be bound by two antibodies simultaneously.

This is a preview of subscription content, access via your institution.

Fig. 1
Fig. 2
Fig. 3

References

  1. Baeumner A (2003) Anal Bioanal Chem 377:434–445

    Article  CAS  PubMed  Google Scholar 

  2. Junhui Z, Hong C, Ruifu Y (1997) Biotechnol Adv 15(1):43–58

    Article  PubMed  Google Scholar 

  3. Bernacchi S, Mely Y (2001) Nucleic Acids Res 29(13):E62

    PubMed  Google Scholar 

  4. Liu X, Farmerie W, Schuster S, Tan W (2000) Anal Biochem 283:56–63

    Article  CAS  PubMed  Google Scholar 

  5. Hartley H, Baeumner A (2003) Anal Bioanal Chem 376(3):319–327

    CAS  PubMed  Google Scholar 

  6. Baeumner A, Schlesinger N, Slutzki N, Romano J, Lee E, Montagna R (2002) Anal Chem 74:1442–1448

    CAS  PubMed  Google Scholar 

  7. Kwakye S, Baeumner A (2003) Anal Bioanal Chem 376(7):1062–1068

    Article  CAS  PubMed  Google Scholar 

  8. Esch M, Locascio L, Tarlov M, Durst R (2001) Anal Chem 73:2952–2958

    Google Scholar 

  9. Cai H, Cao X, Jiang Y, He P, Fang Y (2003) Anal Bioanal Chem 375:287–293

    CAS  PubMed  Google Scholar 

  10. Campbell C, Gal D, Cristler N, Banditrat C, Heller A (2002) Anal Chem 74:158–162

    CAS  PubMed  Google Scholar 

  11. Meric B, Derman K, Ozkan D, Kara P, Erensoy S, Akarca U, Mascini M, Ozsoz M (2002) Talanta 56:873–846

    Article  Google Scholar 

  12. Zhang Y, Kim H-H, Heller A (2003) Anal Chem 75:3267–3269

    Article  CAS  PubMed  Google Scholar 

  13. Fritz J, Baller M, Lang H, Rothuizen H, Vettiger P, Meyer E, Guntherodt H, Gerber C, Gimzewski J (2000) Science 288(5464):316–318

    Article  Google Scholar 

  14. Mo X-T, Zhou Y-P, Lei H, Deng L (2002) Enzyme and Microb Tech 30(5):583–589

    Article  CAS  Google Scholar 

  15. Feriotto G, Borgatti M, Mischiati C, Bianchi N, Gambari R (2002) J Agr Food Chem 50(5):955–962

    Article  CAS  Google Scholar 

  16. Vercoutere W, Akeson M (2002) Curr Opin Chem Biol 6:816–822

    Article  CAS  PubMed  Google Scholar 

  17. Nelson D, Cox M (2000) Lehninger principles of biochemistry. Worth, New York, pp 1132–1133

  18. Baeumner A, Cohen R, Miksic V, Min J (2003) Biosens Bioelectron 18:405–413

    Article  CAS  PubMed  Google Scholar 

  19. Esch M, Baeumner A, Durst R (2001) Anal Chem 73(13):3162–3167

    Google Scholar 

  20. Rule G, Montagna R, Durst R (1996) Clin Chem 42(8):1206–1209

    CAS  PubMed  Google Scholar 

Download references

Author information

Affiliations

Authors

Corresponding author

Correspondence to Antje J. Baeumner.

Rights and permissions

Reprints and Permissions

About this article

Cite this article

Baeumner, A.J., Jones, C., Wong, C.Y. et al. A generic sandwich-type biosensor with nanomolar detection limits. Anal Bioanal Chem 378, 1587–1593 (2004). https://doi.org/10.1007/s00216-003-2466-0

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00216-003-2466-0

Keywords

  • Biosensor
  • Nucleic acid
  • Antibody
  • Detection
  • Nanomolar