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Streptomyces soli sp. nov., isolated from birch forest soil

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Abstract

A Gram-staining positive, aerobic, non-motile, rod-shaped bacterium, designated strain LAM7114T, was isolated from soil sample collected from a birch forest in Xinjiang Uygur Autonomous Region, China. The optimal temperature and pH for the growth of strain LAM7114T were 30 °C and 7.0, respectively. Strain LAM7114T could grow in the presence of NaCl up to 10% (w/v). Comparative analysis of the 16S rRNA gene sequences revealed that LAM7114T was closely related to the members of the family genus Streptomyces, with the highest similarity to Streptomyces urticae NEAU-PCY-1T (98.3%) and Streptomyces fildesensis GW25-5T (98.2%). The genomic G + C content was 70.0 mol%. The DNA-DNA hybridization values between strain LAM7114T and S. urticae CCTCC AA 2017015T, S. fildesensis CGMCC 4.5735T were 32.5 ± 1.8% and 27.5 ± 2.6%, respectively. The cell wall contained ll-diaminopimelic acid as the diagnostic diamino acid in the peptidoglycan. The whole-cell hydrolysates included glucose and mannose. The major fatty acids were anteiso-C15:0, iso-C15:0 and iso-C16:0. The predominant menaquinones were MK-9(H6), MK-9(H4) and MK-9(H8). The main polar lipids were diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylinositol, three unidentified aminophospholipids, three unidentified phospholipids, and an unidentified aminolipid. Based on the phenotypic characteristics and genotypic analyses, we propose that strain LAM7114T represents a novel species in the genus Streptomyces, for which the name Streptomyces soli sp. nov. is proposed. The type strain is LAM7114T (= CGMCC 4.7581T = JCM 32822T).

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Acknowledgements

The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain LAM7114T is MF784350. The GenBank accession number for the draft genome sequence of strain LAM7114T is RJVR00000000. This work was supported by the National Key R&D Program of China (2017YFD0800702) and National Natural Science Foundation of China (NSFC, No. 31670006).

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Authors and Affiliations

  1. Institute of Agricultural Resources and Regional Planning, CAAS, Beijing, 100081, China

    Jialing Xing, Xu Jiang, Delong Kong, Yiqing Zhou, Miaomiao Li, Xiaoyan Han, Qingyun Ma, Hao Tan & Zhiyong Ruan

  2. College of Bioscience and Engineering, Jiangxi Agricultural University, Nanchang, 330045, People’s Republic of China

    Miaomiao Li & Xiaoyan Han

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  1. Jialing Xing
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Xing, J., Jiang, X., Kong, D. et al. Streptomyces soli sp. nov., isolated from birch forest soil. Arch Microbiol 202, 1687–1692 (2020). https://doi.org/10.1007/s00203-020-01878-z

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