Abstract
Key message
A melon gene MSO1 located on chromosome 10 by map-based cloning strategy, which encodes an ARGONAUTE 7 protein, is responsible for the development of shoot organization.
Abstract
Plant endogenous small RNAs (sRNAs) are involved in various plant developmental processes. In Arabidopsis, sRNAs combined with ARGONAUTE (AGO) proteins are incorporated into the RNA-induced silencing complex (RISC), which functions in RNA silencing or biogenesis of trans-acting siRNAs (ta-siRNAs). However, their roles in melon (Cucumis melo L.) are still unclear. Here, the melon shoot organization 1 (mso1) mutant was identified and shown to exhibit pleiotropic phenotypes in leaf morphology and plant architecture. Positional cloning of MSO1 revealed that it encodes a homologue of Arabidopsis AGO7/ZIPPY, which is required for the production of ta-siRNAs. The AG-to-C mutation in the second exon of MSO1 caused a frameshift mutation and significantly reduced its expression. Ectopic expression of MSO1 rescued the Arabidopsis ago7 phenotype. RNA-seq analysis showed that several genes involved in transcriptional regulation and plant hormones were significantly altered in mso1 compared to WT. A total of 304 and 231 miRNAs were identified in mso1 and WT by sRNA sequencing, respectively, and among them, 42 known and ten novel miRNAs were differentially expressed. cme-miR390a significantly accumulated, and the expression levels of the two ta-siRNAs were almost completely abolished in mso1. Correspondingly, their targets, the ARF3 and ARF4 genes, showed dramatically upregulated expression, indicating that the miR390-TAS3-ARF pathway has conserved roles in melon. These findings will help us better understand the molecular mechanisms of MSO1 in plant development in melon.
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Data availability
The accession number for MSO1 is OL840913. The complete RNA-seq sequencing and sRNA sequencing data for all the samples were deposited in the NCBI SRA database under accession numbers PRJNA787969 and PRJNA787775, respectively.
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This work was supported by grants from the Innovation and Development Program of Beijing Vegetable Research Center (KYCX202001-11), the National Natural Science Foundation of China (U21A20229 and 31701937), Construction Program of Science and Technology Innovation Capacity of Beijing Academy of Agriculture and Forestry Sciences (KJCX20200113), Huaibei major science and technology projects (Z2020011), and the Anhui Key Research and Development Project (202104a06020024).
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JM and CCL co-wrote the manuscript. JM and HJZ conceived this research project and designed the experiments. PG provided help and advice. JSW screened mutants and managed plant growth. YHQ analyzed the RNA-seq and sRNAs data. MZ cloned the MSO1 gene and performed qRT-PCR experiments. All authors have read and approved the manuscript.
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Communicated by Yiqun Weng and Amnon Levi.
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Ma, J., Li, C., Gao, P. et al. Melon shoot organization 1, encoding an AGRONAUTE7 protein, plays a crucial role in plant development. Theor Appl Genet 135, 2875–2890 (2022). https://doi.org/10.1007/s00122-022-04156-2
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DOI: https://doi.org/10.1007/s00122-022-04156-2