Key message
Markers, located in Dicer1 and Ara6 genes, which are likely involved in cross-kingdom RNA trafficking, are associated with FHB resistance in GABI wheat population and were validated in biparental population.
Abstract
Association studies are a common approach to detect marker-trait associations for Fusarium head blight (FHB) resistance in wheat (Triticum aestivum), although verification of detected associations is exceptional. In the present study, candidate-gene association mapping (CG) of genes from silencing and secretory pathways, which may be involved in wheat resistance against FHB and cross-kingdom RNA trafficking, was performed. Fourteen markers, located in nine genes, were tested for association with FHB resistance in 356 lines from the GABI (genome analysis of the biological system of plants) wheat population. Three markers located in the genes Dicer1 and Ara6 were shown to be significantly associated with the studied trait. Verification of this finding was performed using the recombinant inbred lines (RILs) population ‘Apache × Biscay’, segregating for four of our 14 selected markers. We could show association of the Ara6 marker with plant height as well as association with FHB resistance for three markers located in Rab5-like GTPase gene Ara6 and Dicer1. These results confirmed the trait-marker associations detected also in the CG approach. Gene products of the associated genes are involved in response of the plant to pathogens, plant metabolism and may be involved in cross-kingdom RNA trafficking efficiency. The markers detected in the GABI wheat population, which were also validated in the biparental population, can potentially be used in wheat breeding.
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Acknowledgements
This work was supported by the European Union in the Marie Sklodowska-Curie actions “CerealPATH” grant agreement No. 674964. The GABI Wheat consortium which originally put together the diverse variety panel and the phenotypes. Prof. Thomas Miedaner for providing FHB data for ‘Apache × Biscay’ population for two locations in year 2016 and for his help to improve the manuscript.
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KMS-D wrote the first version of the manuscript; KMS-D and JCR wrote the final version of the manuscript; DN, AD; VK helped to improve the manuscript; PS, VK, SK, and JCR designed the study; KMS-D and JCR performed the analysis; SK and KMS-D collected data.
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Słomińska-Durdasiak, K.M., Kollers, S., Korzun, V. et al. Association mapping of wheat Fusarium head blight resistance-related regions using a candidate-gene approach and their verification in a biparental population. Theor Appl Genet 133, 341–351 (2020). https://doi.org/10.1007/s00122-019-03463-5
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DOI: https://doi.org/10.1007/s00122-019-03463-5