Skip to main content
Log in

Airborne myxomycete spores: detection using molecular techniques

  • Short Communication
  • Published:
Naturwissenschaften Aims and scope Submit manuscript

Abstract

Myxomycetes are organisms characterized by a life cycle that includes a fruiting body stage. Myxomycete fruiting bodies contain spores, and wind dispersal of the spores is considered important for this organism to colonize new areas. In this study, the presence of airborne myxomycetes and the temporal changes in the myxomycete composition of atmospheric particles (aerosols) were investigated with a polymerase chain reaction (PCR)-based method for Didymiaceae and Physaraceae. Twenty-one aerosol samples were collected on the roof of a three-story building located in Sapporo, Hokkaido Island, northern Japan. PCR analysis of DNA extracts from the aerosol samples indicated the presence of airborne myxomycetes in all the samples, except for the one collected during the snowfall season. Denaturing gradient gel electrophoresis (DGGE) analysis of the PCR products showed seasonally varying banding patterns. The detected DGGE bands were subjected to sequence analyses, and four out of nine obtained sequences were identical to those of fruiting body samples collected in Hokkaido Island. It appears that the difference in the fruiting period of each species was correlated with the seasonal changes in the myxomycete composition of the aerosols. Molecular evidence shows that newly formed spores are released and dispersed in the air, suggesting that wind-driven dispersal of spores is an important process in the life history of myxomycetes. This study is the first to detect airborne myxomycetes with the use of molecular ecological analyses and to characterize their seasonal distribution.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2

References

  • Adl SM, Simpson AGB, Farmer MA, Andersen RA, Anderson OR, Barta JR, Bowser SS, Brugerolle G, Fensome RA, Fredericq S, James TY, Karpov S, Kugrens P, Krug J, Lane CE, Lewis LA, Lodge J, Lynn DH, Mann DG, McCourt RM, Mendoza L, Moestrup Ø, Mozley-Standridge SE, Nerad TA, Shearer CA, Smirnov AV, Spiegel FW, Taylor MFJR (2005) The new higher level classification of eukaryotes with emphasis on the taxonomy of protists. J Eukaryot Microbiol 52:399–451

    Article  PubMed  Google Scholar 

  • Aldrich HC, Daniel JW (1982) Cell biology of Physarum and Didymium. Academic, New York

    Google Scholar 

  • Alexopoulos CJ (1963) The myxomycetes II. Bot Rev 29:1–78

    Article  Google Scholar 

  • Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990) Basic local alignment search tool. J Mol Biol 215:403–410

    PubMed  CAS  Google Scholar 

  • Brown RM Jr, Larson DA, Bold HC (1964) Airborne algae: their abundance and heterogeneity. Science 143:583–585

    Article  PubMed  Google Scholar 

  • Gray WD, Alexopoulos CJ (1968) Biology of the myxomycetes. The Ronald Press Company, New York

    Google Scholar 

  • Ing B (1994) The phytosociology of myxomycetes. New Phytol 126:175–201

    Article  Google Scholar 

  • Kamono A, Fukui M (2006) Rapid PCR-based method for detection and differentiation of Didymiaceae and Physaraceae (myxomycetes) in environmental samples. J Microbiol Methods 67:496–506

    Article  PubMed  CAS  Google Scholar 

  • Kawamura K, Kobayashi M, Tsubonuma N, Mochida M, Watanabe T, Lee M (2004) Organic and inorganic compositions of marine aerosols from East Asia: seasonal variations of water-soluble dicarboxylic acids, major ions, total carbon and nitrogen, and stable C and N isotopic composition. In: Hill RJ, Leventhal J, Aizenshtat Z, Baedecker MJ, Claypool G, Eganhouse R, Goldhaber M, Peters K (eds) Geochemical investigation in earth and space science: a tribute to Issac R. Kaplan. Elsevier, Amsterdam, pp 243–265

    Chapter  Google Scholar 

  • Martin GW, Alexopoulos CJ (1969) The myxomycetes. University of Iowa Press, Iowa City

    Google Scholar 

  • Muyzer G, De Waal EC, Uitterlinden AG (1993) Profiling complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl Environ Microbiol 59:695–700

    PubMed  CAS  Google Scholar 

  • Muyzer G, Hottenträger S, Teske A, Wawer C (1996) Denaturing gradient gel electrophoresis of PCR-amplified 16S rDNA. A new molecular approach to analyze the genetic diversity of mixed microbial communities. In: Akkermans ADL, Van Elsas JD, De Bruijn FJ (eds) Molecular microbial ecology manual. Kluwer, Dordrecht, pp 3.4.4.1–3.4.4.22

    Google Scholar 

  • Schnittler M, Unterseher M, Tesmer J (2006) Species richness and ecological characterization of myxomycetes and myxomycete-like organisms in the canopy of temperate deciduous forest. Mycologia 98:223–232

    Article  PubMed  Google Scholar 

  • Snell KL, Keller HW (2003) Vertical distribution and assemblages of corticolous myxomycetes on five tree species in the Great Smoky Mountains National Park. Mycologia 95:565–576

    Article  Google Scholar 

  • Stephenson SL, Schnittler M, Novozhilov YK (2008) Myxomycete diversity and distribution from the fossil record to the present. Biodivers Conserv 17:285–301

    Article  Google Scholar 

  • Yamamoto Y (1998) The myxomycete biota of Japan. Toyo Shorin, Tokyo (in Japanese)

    Google Scholar 

  • Yamamoto Y (2006) Supplement of “The myxomycete biota of Japan”. The Japanese Society of Myxomycetology, Fukui (in Japanese)

    Google Scholar 

Download references

Acknowledgments

We thank H. Hagiwara and Y. Kasahara for discussions or comments; Y. Higashioka, M. Fujii, M. Tsutsumi, and T. Nishi for assistance with field collections of fruiting body samples; M. Kobayashi, N. Tsubonuma, and K. Okuzawa for the help of aerosol sampling. We thank the Nopporo Forest Park, Hokkaido, Japan for permission to collect materials. This work was supported by a grant of Ministry of Education, Culture, Sports, Science and Technology to M.F. (16370014). The experiments comply with the current laws of the countries in which they were performed.

Author information

Authors and Affiliations

Authors

Corresponding authors

Correspondence to Akiko Kamono or Manabu Fukui.

Electronic supplementary material

Below is the link to the electronic supplementary material.

ESM

(DOC 85 kb)

Rights and permissions

Reprints and permissions

About this article

Cite this article

Kamono, A., Kojima, H., Matsumoto, J. et al. Airborne myxomycete spores: detection using molecular techniques. Naturwissenschaften 96, 147–151 (2009). https://doi.org/10.1007/s00114-008-0454-0

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00114-008-0454-0

Keywords

Navigation