Abstract
Cyclin-dependent kinase 5 (CDK5) and Casein kinase 1 (CK1) are both involved in the hyperphosphorylation of the Tau protein and in the amyloid-β production, the two major hallmarks of Alzheimer’s disease. In the present paper, we describe the synthesis and biological evaluation of new series of 2,6,9-trisubstituted purines derived from DRF53, a dual specificity inhibitor of the kinase activity of CDK5 (IC50 = 80 nM) and CK1 (IC50 = 10 nM), and are able to prevent in a dose-dependent manner the CK1-dependent production of amyloid-β in a cell model. Several molecules (e.g., 6e, 6g, 7c) displayed potent kinase inhibitory activities against CDK5 and CK1 (IC50 values ranging from 20 to 50 nM) among which a selective inhibitor of CK1 has been identified (5a, IC50 = 60 nM). In addition, some compounds exhibit sub-micromolar activities against DYRK1A (dual specificity, tyrosine phosphorylation regulated kinase 1A), a kinase involved in Down syndrome and Alzheimer’s disease (6g, IC50 = 510 nM).
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Bach S, Knockaert M, Reinhardt J, Lozach O, Schmitt S, Baratte B, Koken M, Coburn SP, Tang L, Jiang T, Liang DC, Galons H, Dierick JF, Pinna LA, Meggio F, Totzke F, Schaechtele C, Lerman AS, Carnero A, Wan Y, Gray N, Meijer L (2005) Roscovitine targets, protein kinases and pyridoxal kinase. J Biol Chem 280:31208–31219
Becker W (2011) Sippli W Activation, regulation, and inhibition of DYRK1A. FEBS Lett 278:246–256
Bettayeb K, Oumata N, Echalier A, Ferandin Y, Endicott JA, Galons H, Meijer L (2008) CR8, a potent and selective, roscovitine-derived inhibitor of cyclin-dependent kinases. Oncogene 27:5797–5807
Bischof J, Leban J, Zaja M, Grothey A, Radunsky B, Othersen O, Strobl S, Vitt D, Knippschild U (2012) 2-Benzamido-N-(1H-benzo[d]imidazol-2-yl)thiazole-4-carboxamide derivatives as potent inhibitors of CK1δ/ε. Amino Acids 43:1577–1591
Camins A, Verdaguer E, Folch J, Canudas AM, Pallas M (2006) The role of CDK5/P25 formation/inhibition in neurodegeneration. Drug News Perspect 19(8):453–460
Cruz J, Tsai LH (2004) Cdk5 deregulation in the pathogenesis of Alzheimer’s disease. Trends Mol Med 10(9):452–458
Cruz JC, Kim D, Moy LY, Dobbin MM, Sun X, Bronson RT, Tsai LH (2006) p25/cyclin-dependent kinase 5 induces production and intraneuronal accumulation of amyloid β in vivo. J Neurosci 26:10536–10541
Debdab M, Carreaux F, Renault S, Soundararajan M, Fedorov O, Filippakopoulos P, Lozach O, Babault L, Tahtouh T, Baratte B, Ogawa Y, Hagiwara M, Eisenreich A, Rauch U, Knapp S, Meijer L, Bazureau J-P (2011) Leucettines, a class of potent inhibitors of cdc2-like kinases and dual specificity, tyrosine phosphorylation regulated kinases derived from the marine sponge leucettamine B. Modulation of alternative pre-RNA splicing. J Med Chem 54:4172–4186
Demange L, Oumata N, Quinton J, Bouaziz S, Lozach O, Meijer L, Galons H (2008) Heterocycles 75(7):1735–1743
Demange L, Nait Abdellah F, Lozach O, Ferandin Y, Gresh N, Meijer L, Galons H (2012) Potent inhibitors of CDK5 derived from roscovitine: synthesis, biological evaluation and molecular modelling. Bioorg Med Chem Lett. doi:10.1016/j.bmcl.2012.10.141
Dominguez JM, Fuertes A, Orozco L, Monte-Millan M, Delgado E, Medina M (2012) Evidence for irreversible inhibition of glycogen synthase kinase-3β by tideglusib. J Biol Chem 287(2):893–904
Flajolet M, He G, Heiman M, Lin A, Nairn AC, Greengard P (2007) Regulation of Alzheimer’s disease amyloid-beta formation by casein kinase I. Regulation of Alzheimer’s disease amyloid-β formation by casein kinase I. Proc Natl Acad Sci USA 104:4159–4164
Frost D, Meechoovet B, Wang T, Gately S, Giorgetti M, Shcherbakova I, Dunkey T (2011) β-carboline compounds, including harmine, inhibit DYRK1A and tau phosphorylation at multiple Alzheimer’s disease-related sites. PloSONE 6(5):e19264
Ghose AK, Herbertz T, Hudkins RL, Dorsey BD, Mallamo JP (2012) Knowledge-based, central nervous system (CNS) lead section and lead optimization for CNS drug discovery. ACS Chem Neurosci 3:50–68
Giraud F, Alves G, Debiton E, Nauton L, Théry V, Durieu E, Ferandi Y, Lozach O, Meijer L, Anizon F, Pereira E, Moreau P (2011) Synthesis, protein kinase inhibitory potencies, and in vitro antiproliferative activities of meridianin derivatives. J Med Chem 54:4474–4489
Götz J, Ittner A, Ittner LM (2012) Tau-targeted treatment strategies in Alzheimer’s disease. Br J Pharmacol 165:1246–1259
Gravitz L (2011) Drugs:a tangled web of targets. Nature 475:S9–S11
Heathcore DA, Patel H, Kroll SHB, Hazel P, Periyasamy M, Alikian M, Kanneganti SK, Jogalekar AS, Scheiper B, Barbazanges M, Blum A, Brackow J, Siwicka A, Pace RDM, Fuchter MJ, Snyder JP, Liotta DC, Freemont PS, Aboagye EO, Coombes RC, Barrett AGM, Ali S (2010) A novel pyrazolo[1,5-a]pyrimidine is a potent inhibitor of cyclin-dependent protein kinases 1, 2, and 9, which demonstrates antitumor effects in human tumor xenografts following oral administration. J Med Chem 53:8508–8522
Huang HC, Klein PS (2006) Multiple roles for glycogen synthase kinase-3 as a drug target in Alzheimer’s disease. Curr Drug Targets 7(11):1389–1397
Huang H, Acquaviva L, Berry V, Bregman H, Chakka N, O’Connor A, Dimauro EF, Dovey J, Epstein O, Grubinska B, Goldstein J, Gunaydin H, Hua Z, Huang H, Huang L, Human J, Long A, Newcomb J, Patel VF, Saffran D, Serafino R, Schneider S, Strathdee C, Tang J,Turci S, White R, Yu V, Zhao H, Wilson C, Martin MW (2012) Structure-based Design of Potent and Selective CK1γ Inhibitors. ACS Med Chem Lett. doi:10.1021/ml300278f
Ittner LM, Götz J (2011) Amyloid-β and Tau-a toxic pas de deux in Alzheimer’s disease. Nat Rev Neurosci 12:65–72
Laha JK, Zhang X, Qiao L, Liu M, Chatterjee S, Robinson S, Kosic KS, Cuny GD (2011) Structure–activity relationship study of 2,4-diaminothiazoles as Cdk5/p25 kinase inhibitors. Bioorg Med Chem Lett 21:2098–2101
Legraverend M, Grierson DS (2006) The purines: potent and versatile small molecule inhibitors. Bioorg Med Chem 14:3987–4006
Mangu N, Spannenberg A, Beller M, Tse MK (2010) Synthesis of novel annulated hymenialdisine analogues via palladium-catalyzed cross-coupling reaction with aryl boronic acids. Synlett 2:211–214
Martin L, Page G, Terro F (2011) Tau phosphorylation and neuronal apoptosis induced by the blockade of PP2A preferentially involve GSK3β. Neurochem Int 59(2):235–250
Meijer L, Thunnissen AM, White AW, Garnier M, Nikolic M, Tsai LH, Walter J, Cleverley KE, Salinas PC, Wu YZ, Biernat J, Mandelkow EM, Kim SH, Pettit GR (2000) Inhibition of the cyclin dependent kinases, GSK-3beta and CK1 by hymenialdisine, a marine sponge constituent. Chem Biol 7:51–63
Meijer L, Bettayeb K, Galons H Roscovitine (CYC202, Seliciclib) (2006) In: Smith PJ, Yue E (eds) CDK Inhibitors and their Potential as Antitumor Agents; Monographs on Enzyme Inhibitors. CRC Press, Taylor & Francis: Boca Raton, vol. 2, chapter 9, pp 187–226
Neagoie C, Vedrenne E, Buron F, Mérour JY, Rosca S, Bourg S, Lozach O, Meijer L, Baldeytou B, Lansiaux A, Routier S (2012) Synthesis of chromeno[3,4-b]indoles as lamellarin D analogues:a novel DYRK1A inhibitor class. Eur J Med Chem 49:379–396
Oumata N, Bettayeb K, Ferandin Y, Demange L, Lopez-Giral A, Goddard ML, Myrianthopoulos V, Mikros V, Flajolet M, Greengard P, Meijer L, Galons H (2008) Roscovitine-derived dual-specificity inhibitors of cyclin-dependent kinases and casein kinases 1. J Med Chem 51(17):5229–5242
Papeo G, Posteri H, Borghi D, Varasi M (2005) A new glycociamidine ring precursor: synthesis of (Z)-hymenialdisine, (Z)-2-debromohymenialdisine, and (±)-endo-2-debromohymenialdisine. Org Lett 7(25):5641–5644
Peifer D, Abadeh M, Bischof J, Hauser D, Schattel V, Hirner H, Knippschild U, Laufer S (2009) 3,4-diaryl-isoxazoles and –imidazoles as potent dual inhibitors of p38α mitogen activated protein kinase and casein kinase 1δ. J Med Chem 52(18):7618–7630
Perez DI, Gil C, Martinez A (2011) Protein kinases CK1 and CK2 as new targets for neurodegenerative diseases. Med Res Rev 31(6):924–954
Popowycz F, Fournet G, Schneider C, Bettayeb K, Ferandin Y, Lamigeon C, Tirado OM, Mateo-Lozano S, Notario V, Colas P, Bernard P, Meijer L, Joseph B (2009) Pyrazolo[1,5-a]-1,3,5-triazine as purine bioisostere: access to potent cyclin dependent kinase inhibitor (R)-roscovitine analogue. J Med Chem 53(3):655–663
Reinhardt J, Ferandin Y, Meijer L (2007) Purification of CK1 by affinity chromatography on immobilised axin. Protein Expression Purif 54:101–109
Rivkin A, Ahearn SP, Chichetti SM, Hamblett CL, Garcia Y, Martinez M, Hubbs JL, Reutershan MH, Daniels MH, Siliphaivanh P, Otte KM, Li C, Rosenau A, Surdi LM, Jung J, Hughes BL, Crispino JL, Nikov GN, Middleton RE, Moxham CM, Szewczak AA, Shah S, Moyb LY, Kenific CM, Tanga F, Cruz JC, Andrade P, Angagaw MH, Shomer NH, Miller T, Munoz B, Shearman MS (2010) Purines derivatives as potent γ-secretase modulators. Bioorg Med Chem Lett 20:2279–2282
Rosenthal AS, Tanege C, Shen M, Mott BT, Bougie JM, Nguyen DT, Misteli T, Auld DS, Maloney CJ, Thomas CJ (2011) Potent and selective small molecule inhibitors of specific isoforms of Cdc2-like kinases (Clk) and dual specificity tyrosine-phosphorylation-regulated kinases (Dyrk). Bioorg Med Chem Lett 21:3152–3158
Sadleir KR, Vassar R (2012) Cdk5 protein inhibition and Aβ42 increase BACE1 protein level in primary neurons by a post-transcriptional mechanism. J Biol Chem 287(10):7224–7235
Shiradkar M, Thomas J, Kanase V, Dighe R (2011) Studying synergism of methyl linked cyclohexyl thiophenes with triazole: synthesis and their cdk5/p25 inhibition activity. Eur J Med Chem 46:2066–2074
Wang D, Wang F, Tan Y, Dong L, Chen L, Zhu W, Wang H (2012) Discovery of potent small molecule inhibitors of DYRK1A by structure-based virtual screening and bioassay. Bioorg Med Chem Lett 22:168–171
Wegiel J, Dowjat K, Kaczmarski W, Kuchna I, Nowicki K, Frackowiak J, Kolecka BM, Wegiel J, Silverman WP, Reisberg B, deLeon M, Wisniewski T, Gong CX, Liu F, Adayev T, Chen-Hwang MC, Hwang YW (2008) The role of overexpressed DYRK1A protein in the early onset of neurofibrillary degeneration in Down syndrome. Acta Neuropathol 116:391–407
Wegiel J, Gong CX, Hwang YW (2011) The role of DYRK1A in neurodegenerative diseases. FEBS J 278(2):239–245
Acknowledgments
This research was supported by grants from the “Cancéropole Grand-Ouest” (LM), the “Institut National du Cancer” (INCa “Cancer Détection d’innovations 2006”) (LM), the “Association France-Alzheimer Finistère” (LM), and the “Ligue Nationale contre le Cancer (Grand-Ouest)” (LM).
Pr. Christiane Garbay is gratefully acknowledged for critical reading of the manuscript.
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Demange, L., Lozach, O., Ferandin, Y. et al. Synthesis and evaluation of new potent inhibitors of CK1 and CDK5, two kinases involved in Alzheimer’s disease. Med Chem Res 22, 3247–3258 (2013). https://doi.org/10.1007/s00044-012-0334-1
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DOI: https://doi.org/10.1007/s00044-012-0334-1