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A high-resolution melting analysis method for the effective discrimination of three Sepia species

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Abstract

A high resolution melting (HRM) curve analysis of single nucleotide polymorphisms (SNPs) was used to identify three Sepia species, commonly found on the south coast of China. The mitochondrial 16S rRNA gene sequences from Sepiella japonica, Sepia pharaonis and Sepia lycidas were amplified and aligned. A total of 19 SNPs and seven deletion sites were identified in 122-base-pair (bp) amplicons. All samples from the three Sepia species were clustered into three curves based on HRM analysis, in line with the sequencing results. This new method thus enables a quick, economical and efficient identification of Sepia species.

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References

  • Jilberto F, Araneda C et al (2017) High resolution melting analysis for identification of commercially-important Mytilus species. Food Chem 229:716–720

    Article  CAS  Google Scholar 

  • Jin Y, Li Q, Kong L, Yu H, Zhong X (2014) High-resolution melting (HRM) analysis: a highly sensitive alternative for the identification of commercially important Crassostrea oysters. J Mollus Stud 81:167–170

    Article  Google Scholar 

  • Kang D, Sim C (2013) Identification of Culex complex species using SNP markers based on high-resolution melting analysis. Mol Ecol Resour 13:369–376

    Article  CAS  Google Scholar 

  • Liu B, Fang Z, Chen X, Chen Y (2015) Spatial variations in beak structure to identify potentially geographic populations of Dosidicus gigas in the eastern pacific ocean. Fish Res 164:185–192

    Article  Google Scholar 

  • Liu Y, Li X, Zhang Y, Lai X, Xiong C, Li J, Sun W, Chen S (2018) DNA barcoding based identification of Hippophae species and authentication of commercial products by high resolution melting analysis. Food Chem 242:62–67

    Article  CAS  Google Scholar 

  • Miller M, Zorn J, Brielmeier M (2015) High-resolution melting curve analysis for identification of Pasteurellaceae species in experimental animal facilities. PLoS ONE 10:e0142560

    Article  Google Scholar 

  • Minton J, Walsh LS, Lee PG (2001) First multi-generation culture of the tropical cuttlefish Sepia pharaonis ehrenberg. Aquacult Int 9(5):379–392

    Article  Google Scholar 

  • Murata R, Mushirobira Y, Fujitab T, Soyanoa K (2019) Gonadal sex differentiation and development during early ontogenesis in the breeding kisslip cuttlefish (Sepia lycidas). Heliyon 5(6):e01948

    Article  Google Scholar 

  • Pang Z, Zhang Y, Liu L (2018) Identification and functional characterization of interferon-γ-inducible lysosomal thiol reductase (gilt) gene in common chinese cuttlefish Sepiella japonica. Fish Shellfish Immun 86:627–634

    Article  Google Scholar 

  • Sanchez G, Setiamarga DHE (2018) Genus-level phylogeny of cephalopods using molecular markers: current status and problematic areas. Peer J 6:e4331

    Article  Google Scholar 

  • Sun L, He M et al (2015) Progress on Cephalopods statoliths structure analysis and its applications. J Zhejiang Ocean Univ (Nat Sci) 5:485

    Google Scholar 

  • Uribe JE, Zardoya R (2017) Revisiting the phylogeny of Cephalopoda using complete mitochondrial genomes. J Mollus Stud 83(2):133–144

    Article  Google Scholar 

  • Yoshida M, Tsuneki K, Furuya H (2006) Phylogeny of selected sepiidae (Mollusca, Cephalopoda) on 12S, 16S, and COI sequences, with comments on the taxonomic reliability of several morphological characters. Zool Sci 23:341–351

    Article  CAS  Google Scholar 

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Acknowledgements

This research was supported by Natural Science Foundation of Zhejiang Province (LY18C190006), Ningbo agricultural major projects (201401C1111001) and sponsored by K.C. Wong Magna Fund in Ningbo University.

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Correspondence to Weiwei Song.

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Zhao, Y., Song, W., Li, R. et al. A high-resolution melting analysis method for the effective discrimination of three Sepia species. J Consum Prot Food Saf 15, 383–385 (2020). https://doi.org/10.1007/s00003-020-01289-8

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  • DOI: https://doi.org/10.1007/s00003-020-01289-8

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