Skip to main content

Advertisement

Log in

Analysis of Natural Intraspecific Variation in Rhododendron nilagiricum Zenk of Nilgiris using RAPD

  • Short Communication
  • Published:
Journal of Plant Biochemistry and Biotechnology Aims and scope Submit manuscript

Abstract

Rhododendron nilagiricum Zenk is the only paleoendemic species of Rhododendron found at Nilgiris. Random amplified polymorphic DNA (RAPD) analysis was carried out to study the extent of genetic polymorphism in trees collected from five locations at Nilgiris. Of the 15 primers tested, 10 revealed polymorphism. The percentage polymorphism ranged from 40 to 92 with an average of 61.5 polymorphism per primer. Pair wise comparisons were made for the RAPD profiles obtained through the use of 10 primers in the representative samples. Data analysis was done by using the POPGENE statistical package. The similarity matrix and the dendrogram obtained showed that there was close similarity between trees collected from different regions of Nilgiris. The cluster analysis showed positive correspondence between genetic diversity and geographic distance. Primer OPZ 13 generated the highest number of bands among the primers, revealed maximum polymorphism and had the greatest capacity for discriminating individuals of R. nilagiricum collected from different regions of Nilgiris.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Subscribe and save

Springer+ Basic
$34.99 /Month
  • Get 10 units per month
  • Download Article/Chapter or eBook
  • 1 Unit = 1 Article or 1 Chapter
  • Cancel anytime
Subscribe now

Buy Now

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Explore related subjects

Discover the latest articles and news from researchers in related subjects, suggested using machine learning.

References

  1. Santapau H & Henry AN, A dictionary of the flowering plants in India, CSIR, New Delhi (1973) p 145.

    Google Scholar 

  2. Nicholson G, Encyclopedia of plants Vol III, Part III, (1991) p 293.

    Google Scholar 

  3. Beddome RH, The flora sylvatica for Southern India, Vol 2, International Book distributors, Dehradun (1978) p 228.

    Google Scholar 

  4. Meher-Homji VM, Sci and Cut, 38 (1972) 8.

    Google Scholar 

  5. Meher-Homji VM, Phytocoenologia, 2 (1975) 28.

    Google Scholar 

  6. Meher-Homji VM, Bulletin Torrey Botanical Club, 94 (1967) 230.

    Article  Google Scholar 

  7. Chalmers KJ, Waugh R, Sprent JI, Simons AJ, & Powell W, Heredity, 69 (1992) 465.

    Article  PubMed  Google Scholar 

  8. Waugh R & Powell W, Trends Biotechnol, 10 (1992) 186.

    Article  CAS  Google Scholar 

  9. Powell W, In Biotechnology and crop improvement in Asia (JP Moss, Editor) ICRISAT, India (1992) pp 297–322.

    Google Scholar 

  10. Tanksley SD, Young ND, Paterson AH, & Bonierbate MW, Bio/Technology, 7 (1989) 257.

    Article  CAS  Google Scholar 

  11. Saghai-Maroof MA, Soliman KM, Jorgenson RA & Allard RA, Proc Natl Acad Sci, USA, 81 (1984) 8014.

    Article  Google Scholar 

  12. Nei M & Li W, Proc Natl Acad Sci, USA, 76 (1979) 5269.

    Article  Google Scholar 

  13. Hamrick JL, In Isozymes in plant biology (DE Soltis, PS Soltis, Editors) Chapman and Hall, London (1990) pp87–105.

    Google Scholar 

  14. Beardmore JA, In Genetics and conservation (CM Schoenwald-Cox, SM Chambers, B Macbryde, L Thomas, Editors.) Benjamin Cummings, Menlo Park, California (1983) pp121–150.

    Google Scholar 

  15. Geburek T, Biodiv and Conser, 6 (1997) 1639.

    Article  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Jayanthi, M., Seeni, S. Analysis of Natural Intraspecific Variation in Rhododendron nilagiricum Zenk of Nilgiris using RAPD. J. Plant Biochem. Biotechnol. 9, 103–106 (2000). https://doi.org/10.1007/BF03263093

Download citation

  • Received:

  • Revised:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF03263093

Key words