Skip to main content
Log in

Characterization of EcoRI mutation in fucosidosis patients: A stop codon in the open reading frame

  • Published:
Journal of Molecular Neuroscience Aims and scope Submit manuscript

Abstract

Recently, a subset of fucosicosis patients was identified in which the single EcoRI site in the open reading frame of the human cDNA encoding α-l-fucosidase was obliterated. We have employed the polymerase chain reaction technique to amplify α-l-fucosidase DNA from the five patients known to carry the EcoRI abnormality as well as four patients and two additional fucosidosis patients who do not carry the EcoRI abnormality. Sequence analysis of the amplified DNA has determined that the EcoRI site was destroyed by a C-T transition in the last position of the EcoRI site. This single base change results in the generation of a stop codon 120 base pairs upstream of the normal stop codon. In addition, we have determined that EcoRI cleavage of amplified DNA may be a useful diagnostic tool in the diagnosis of heterozygotes and in prenatal diagnosis of fetuses at risk for this disease.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Alhadeff, J.A., O'Brien, J.S. (1977). Fucosidosis. Practical Enzymology of the Sphingolipidoses. R.H. Glew and S.P. Peters (eds). Alan R. Liss, Inc., New York, pp 247–281

    Google Scholar 

  • Baserga, S.J., Benz, E.J., Jr. (1988). Nonsense mutations in the human β-globin gene affect mRNA metabolism. Proc. Natl. Acad. Sci. U.S.A. 85:2056–2060

    Article  PubMed  CAS  Google Scholar 

  • Darby, J.K., Willems, P.J., Nakashima, P., Henke, J., Ferrell, R.E., Johnsen, J., Wijsman, E.M., Gerhard, D., Dracopoli, N.C., Housman, D., Fowler, M.L., Shows, T.B., O'Brien, J.S., Cavalli-Sforza, L.L. (1988). Restriction analysis of the structural α-l-fucosidase gene and its linkage to fucosidosis. Am. J. Hum. Genet. 43:749–755

    PubMed  CAS  Google Scholar 

  • de Wet, J.R., Fukushima, H., Dewji, N.N., Wilcox, E., O'Brien, J.S., Helinski, D.R. (1984). Chromogenic immunodetection of human serum albumin and α-l-fucosidase clones in a human hepatoma cDNA expression library. DNA 3:437–447

    PubMed  Google Scholar 

  • Durand, P., Gatti, R., Borrone, C. (1982). Fucosidosis. Genetic Errors of Glycoprotein Metabolism, P. Durand and J.S. O'Brien (eds.), Springer-Verlag, New York, pp 49–87

    Google Scholar 

  • Fukushima, H., de Wet, J.R., O'Brien, J.S. (1985). Molecular cloning of a cDNA for human α-l-fucosidase. Proc. Natl. Acad. Sci. U.S.A. 82:1262–1265

    Article  PubMed  CAS  Google Scholar 

  • Maniatis, T., Fritsch, E.F., Sambrook, J. (eds). (1982). Molecular Cloning: A Laboratory Manual, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York

    Google Scholar 

  • Matsuda, I., Arashima, S., Oka, Y., Mitsuyama, T., Ariga, S., Ikeuchi, T., Ichida, T. (1975). Prenatal diagnosis of fucosidosis. Clin. Chim. Acta 63:55–60

    Article  PubMed  CAS  Google Scholar 

  • O'Brien, J.S., Willems, P.J., Fukushima, H., de Wet J.R., Darby, J.K., Di Cioccio, R., Fowler, M.L., Shows, T.B. (1987). Molecular biology of the alpha-l-fucosidase gene and fucosidosis. Enzyme 38:45–53

    PubMed  Google Scholar 

  • Saiki, R.K., Gelfand, D.H., Stoffel, S., Scharf, S.J., Higuchi, R., Horn, G.T., Mullis, K.B., Erlich, H.A. (1988). Primer directed enzymatic amplification of DNA with a thermostable DNA polymerase. Science 239:487–491

    Article  PubMed  CAS  Google Scholar 

  • Shapiro, M.B., Senapathy, P. (1987). RNA splice junctions of different classes of eukaryotes: Sequence statistics and functional implications in gene expression. Nucleic Acids Res. 15:7155–7174

    Article  PubMed  CAS  Google Scholar 

  • Warner, T.G., O'Brien, J.S. (1983). Genetic defects in glycoprotein metabolism. Annu. Rev. Genet. 17:395–441

    Article  PubMed  CAS  Google Scholar 

  • Willems, P.J., Darby, J.K., Di Cioccio, R.A., Nakashima, P., Eng, C., Kretz, K.A., Cavalli-Sforza, L.L., Shooter, E.M., O'Brien, J.S. (1988) Identification of a mutation in the structural α-l-fucosidase gene in fucosidosis. Am J. Hum. Genet. 43:756–763

    PubMed  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Additional information

This research was supported by National Institutes of Health grants HD 18983 and NS 08682 to J.S.O., GM 28428 to J.K.D. and Training Grant PHS DK 07318 to K.A.K.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Kretz, K.A., Darby, J.K., Willems, P.J. et al. Characterization of EcoRI mutation in fucosidosis patients: A stop codon in the open reading frame. J Mol Neurosci 1, 177–180 (1989). https://doi.org/10.1007/BF02918904

Download citation

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF02918904

Keywords

Navigation