Abstract
In contrast to selenoprotein Ps (SeIPs) from other animal species, bovine selenoprotein P-like-protein (SeIPLP) was found to contain a tandem repeat of (CAYYCC)11. During an investigation into whether SeIPLP was a bovine substitute for SeIP or uniquely bovine, its mRNA was found to consist of multiple variants with different length tandem repeat, namely p(0) with (CAYYCC)11, p(−4) lacking (CAYYCC)4, p(−8) lacking (CAYYCC)8, and p(−9) lacking (CAYYCC)9. Although they were encoded on a single gene locus, neither classicalGT-AG nor minor classAT-AC donator-acceptor sequences for alternative splicing were identified. A subsequent S1 protection assay using oligonucleotides, whose sequence may occur as variants, performed against bovine poly(A)+RNA identified a total of nine variants. Judging from the sequence of these variants and the branch point mapping, the consensus sequence for recognition of the donator was CACCCCCAC and of the acceptor and the branch point A nucleotide,ACCCCCAT orACCCCCATCCCCAT. Furthermore, when the p(0) insert mRNA was expressed in COS-7 cells derived from an African green monkey kidney, cDNAs corresponding to p(−8) and p(−9) could be isolated. Therefore, the bovine SeIPLP mRNAs consisted of multiple variants probably due to a novel splicing mechanism which was not bovine-specific but common to other mammals.
Similar content being viewed by others
References
Hill KE, Lloyd RS, Yang JG, Read R, Burk RF. The cDNA for rat selenoprotein P contains 10 TGA codons in the open reading frame. J Biol Chem. 1991; 266: 10050–10053.
Hill KE, Lloyd RS, Burk RF. Conserved nucleotide sequence in the open reading frame and 3′ untraslated region of selenoprotein P mRNA. Proc Natl Acad Sci U S A. 1993; 90: 537–541.
Saijoh K, Saito N, Lee MJ, Fujii M, Kobayashi T, Sumino K. Molecular cloning of cDNA encoding a bovine selenoprotein P-like protein containing 12 selenocysteines and a (His-Pro) rich domain insertion, and its regional expression. Mol Brain Res. 1995; 30: 301–311.
Fujii M, Saijoh K, Kobayashi T, Fujii S, Lee MJ, Sumino K. Analysis of bovine selenoprotein P-like protein gene and availability of metal responsive element (MRE) located in its promoter. Gene. 1997; 199: 211–217.
Kramer A. The structure and function of proteins involved in mammalian pre-mRNA splicing. Ann Rev Biochem. 1996; 65: 367–409.
Wu Q, Krainer AR. U1-mediated exon definition interactions between AT-AC and GT-AG introns. Science. 1996; 276: 1005–1008.
Davis LG, Kuehl M, Battey J. Basic Methods in Molecular Biology. 2nd ed., New York: Elsevir Science Publishing; 1994.
Grabowski PJ. Characterization of RNA. In: Higgins SJ, Hames BD, editors. RNA Processing Vol. 1. New York: IRL Press; 1994. p. 49–55.
Gluzman Y. SV 40-transformed simian cells support the replication of early SV40 mutants. Cell. 1981; 23: 175–182.
Frigerio G, Burri M, Bopp D, Baumgartner S, Noll M. Structure of the segmentation gene paired and the Drosophilla PRD gene set as part of a gene network. Cell. 1986; 47: 735–746.
Tanda S, Corces VG. Retrotransposon-induced overexpression of a homeobos gene causes defects in eye morphogenesis in Drosphila. EMBO J. 1991; 10: 407–417.
Alberts B, Bray D, Lewis J, Raff M, Roberts K, Watson JD. Molecular Biology of the Cell, 3rd ed. Garland New York; 1994. p. 365–378.
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Saijoh, K., Kobayashi, T., Nagano-Fujii, M. et al. Multiple variant mRNAs with different length tandem repeats of (CAYYCC)n produced from bovine selenoprotein P-like protein gene. Environ Health Prev Med 10, 103–110 (2005). https://doi.org/10.1007/BF02898000
Received:
Accepted:
Issue Date:
DOI: https://doi.org/10.1007/BF02898000