Skip to main content
Log in

Construction and analysis of a substracted cDNA library ofBetula platyphylla female inflorescence

  • Published:
Journal of Forestry Research Aims and scope Submit manuscript

Abstract

Female inflorescence ofBetula platyphylla was sampled at an interval of each two days to analyze the background of gene expression in floral phase. On the basis of SMART strategy, the driver cDNA was obtained from total RNA of the last sample and the tester cDNA was from that of the others by RT-PCR which were subsequently used to construct a subtracted cDNA library. The result of the ESTs (expression sequence tags) blastX showed that the genes in the subtracted cDNA library could be mainly clustered into 5 groups related to metabolism, transportation and signal transduction, cell cycle, stress response, and regulation. The relationship between gene expression and development was also discussed.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Ausubel, F., Brent, R., Kingston, R.E., Moore, D.D., Seidman, J.G., Smith, J.A., Struhl, K. 1995. Short protocols in molecular biology [M] (Chinese version in 1998). Beijing: Science Press, p 126–127.

    Google Scholar 

  • Cardon, G.H., Hohmann, S., Nettesheim, K., Saedler, H., Huijser, P. 1997. Functional analysis of the Arabidopsis thaliana SBP-box gene SPL3: a novel gene involved in the floral transition [J]. Plant J.,12(2): 367–377.

    Article  PubMed  CAS  Google Scholar 

  • Cheng, Y., Kato, N., Wang, W., Li, J., Chen, X. 2003. Two RNA binding proteins, HEN4 and HUA1, act in the processing of AGAMOUS pre-mRNA inArabidopsis thaliana [J]. Dev. Cell,4(1): 53–66.

    Article  PubMed  CAS  Google Scholar 

  • Colombo, L., Franken, J., Koetje, E., van Went, J., Dons, H.J., Angenent, G.C., van Tunen, A.J. 1995. The petunia MADS box gene FBP11 determines ovule identity [J]. Plant Cell,7(11): 1859–1868.

    Article  PubMed  CAS  Google Scholar 

  • Cone, E.S., Meyerowitz, E.M. 1991. The war of the whorls: Genetics interactions controlling flower development [J]. Nature,353: 31–37.

    Article  Google Scholar 

  • Elo, A., Lemmetyinen, J., Turunen, M.L., Tikka, L., Sopanen, T. 2001. Three MADS-box genes similar to APETALA1 and FRUITFULL from silver birch (Betula pendula) [J]. Physiol Plant,112(1): 95–103.

    Article  PubMed  CAS  Google Scholar 

  • Felton, G.W., Donato, K.K., Del Vecchio, R.J., Duffey, S.S. 1989. Activation of foliar oxidases by insect feeding reduces nutritive quality of dietary protein of foliage for noctuid herbivores [J]. J Chem Ecol,15: 2667–2693

    Article  CAS  Google Scholar 

  • Galan, J.M. Peter, M. 1999. Ubiquitin-dependent degradation of multiple F-box proteins by an autocatalytic mechanism [J]. Proc. Natl. Acad. Sci. USA,96(16): 9124–9133.

    Article  PubMed  CAS  Google Scholar 

  • Golovkin, M., Reddy, A.S. 2003. A calmodulin-binding protein from Arabidopsis has an essential role in pollen germination [J]. Proc. Natl. Acad. Sci. USA,100(18): 10558–10563.

    Article  PubMed  CAS  Google Scholar 

  • Jarvinen, P., Lemmetyinen, J., Savolainen, O., Sopanen, T. 2003. DNA sequence variation in BpMADS2 gene in two populations ofBetula pendula [J]. Mol. Ecol.,12(2): 369–384.

    Article  PubMed  CAS  Google Scholar 

  • Koning, A.J., Tanimoto, E.Y., Kiehne, K., Rost, T., Comai, L. 1991. Cell-specific expression of plant histone H2A genes [J]. Plant Cell,3(7): 657–665.

    Article  PubMed  CAS  Google Scholar 

  • Lannenpaa, M., Janonen, I., Holtta-Vuori, M., Gardemeister, M., Porali, I., Sopanen, T. 2004. A new SBP-box gene BpSPL1 in silver birch (Betula pendula) [J]. Physiol. Plant,120(3): 491–500.

    Article  PubMed  Google Scholar 

  • Lauber, M.H., Waizenegger, I., Steinmann T., Schwarz, H., Mayer, U., Hwang, I., Lukowitz, W., Jurgens, G. 1997. The Arabidopsis KNOLLE protein is a cytokinesis-specific syntaxin [J]. J Cell Biol.,139(6): 1485–1493.

    Article  PubMed  CAS  Google Scholar 

  • Lemmetyinen, J., Hassinen, M., Elo, A., Porali, I., Keinonen, K., Makela, H., Sopanen, T. 2004. Functional characterization of SEPALLATA3 and AGAMOUS orthologues in silver birch [J]. Physiol Plant,121(1): 149–162.

    Article  PubMed  CAS  Google Scholar 

  • Liu, G., Sanchez-Fernandez, R., Li, Z.S., Rea, P.A. 2001. Enhanced multispecificity of arabidopsis vacuolar multidrug resistance-associated protein-type ATP-binding cassette transporter, AtMRP2 [J]. J Biol Chem.,276(12): 8648–8656.

    Article  PubMed  CAS  Google Scholar 

  • Lu, Y.P., Li, Z.S., Drozdowicz, Y.M., Hortensteiner, S., Martinoia, E., Rea, P.A. 1998. AtMRP2, an Arabidopsis ATP binding cassette transporter able to transport glutathioneS-conjugates and chlorophyll catabolites: functional comparisons with Atmrp1 [J]. Plant Cell,10(2): 267–282.

    Article  PubMed  CAS  Google Scholar 

  • McKinney, E.C., Kandasamy, M.K., Meagher, R.B. 2002. Arabidopsis contains ancient classes of differentially expressed actin-related protein genes [J]. Plant Physiol.,128(3): 997–1007.

    Article  PubMed  CAS  Google Scholar 

  • Mizukami, Y., Ma, H. 1997. Determination of Arabidopsis floral meristem identity by AGAMOUS [J]. Plant Cell,9(3): 393–408.

    Article  PubMed  CAS  Google Scholar 

  • Ng, M., Yanofsky, M.F. 2001. Activation of theArabidopsis B class homeotic genes by APETALA1 [J]. Plant Cell,13(4):739–753.

    Article  PubMed  CAS  Google Scholar 

  • Pelaz, S., Ditta, G.S., Baumann, E., Wisman, E. Yanofsky, M.F. 2000. B and C floral organ identity functions require SEPALLATA MADS-box genes [J]. Nature,405(6783): 200–203.

    Article  PubMed  CAS  Google Scholar 

  • Pelttari, J., Hoja, M.R., Yuan, L., Liu, J.G., Brundell, E., Moens, P., Santucci-Darmanin, S., Jessberger, R., Barbero, J.L., Heyting, C., Hoog, C. 2001. A meiotic chromosomal core consisting of cohesin complex proteins recruits DNA recombination proteins and promotes synapsis in the absence of an axial element in mammalian meiotic cells [J]. Mol. Cell Biol.,21(16): 5667–5677.

    Article  PubMed  CAS  Google Scholar 

  • Sirko, A., Brodzik, R. 2000. Plant ureases: roles and regulation [J]. Acta Biochim Pol.,47(4): 1189–1195.

    PubMed  CAS  Google Scholar 

  • Su Xiumin, Wu Fengmao, Hong Tao, Wu Yueliang, Shi Chengjun, Wang Liming. 2000. Technology of anthesis inducing ofBetula platyphylla [J]. Journal of Liaoning Forestry Science & Technology,3: 47. (in Chinese)

    Google Scholar 

  • Xu, H., Swoboda, I., Bhalla, P.L., Singh, M.B. 1999. Male gametic cell-specific, expression of H2A and H3 histone genes [J]. Plant Mol. Biol.,39(3): 607–614.

    Article  PubMed  CAS  Google Scholar 

  • Yanagisawa, S., 2002. The Dof family of plant transcription factors [J]. Trends Plant Sci.,7(12): 555–560.

    Article  PubMed  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Additional information

Foundation item: This project was supported by National Natural Science Foundation of China (39970627)

Biography: WEI Ji-cheng (1968-), male, Ph. D. candidate of Northeast Forestry University, Harbin 150040, P. R. China.

Responsible editor: Song Funan

Rights and permissions

Reprints and permissions

About this article

Cite this article

Ji-cheng, W., Chuan-ping, Y., Chao, W. et al. Construction and analysis of a substracted cDNA library ofBetula platyphylla female inflorescence. Journal of Forestry Research 16, 97–100 (2005). https://doi.org/10.1007/BF02857898

Download citation

  • Received:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF02857898

Keywords

CLC number

Document code

Navigation