Skip to main content
Log in

Amplification of RAPD markers from single pollen grains of diploid (2N=2X=24) potato

  • Published:
American Journal of Potato Research Aims and scope Submit manuscript

Abstract

Pollen grains from a diploidSolatium clone 9507-04 were used for RAPD analysis. Single pollen grains were isolated from pollen in liquid suspension, or from dry pollen spread on a glass slide, and collected in individual PCR tubes. Dry pollen isolation was found advantageous due to the convenience of handling and reduction in DNA cross-contamination. Primers UBC291 and UBC504 were selected for the RAPD analysis of both the pollen samples and the pollen donor.Solanum clone 9507-04 produced three RAPD markers UBC291-1.4, UBC291-0.8 and UBC291-0.4, under the selected PCR conditions. Amplification of three additional parental markers UBC504-1.17, UBC504-0.96 and UBC504-0.78 was also tested in a selected pollen sample. RAPD products were discernible from single pollen grains without requiring any DNA extraction procedures. The three UBC291 amplified RAPD markers of the parent segregated in the selected sample of 60 pollen grains. Potential applications of the RAPD analysis of single pollen grains are described.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

Abbreviations

DNA:

deoxyribonucleic acid

PCR:

polymerase chain reaction

RAPD:

random amplified polymorphic DNA

Literature Cited

  • Brewbaker, J.L. and B.H. Kwack. 1963. The essential role of calcium ion in pollen germination and pollen tube growth. Am J Bot 50:859–865.

    Article  CAS  Google Scholar 

  • Brown, P.T.H., F.D. Lange, E. Kranz, and H. Lπrz. 1993. Analysis of single protoplasts and regenerated plants by PCR and RAPD technology. Mol Gen Genet 237:311–317.

    PubMed  CAS  Google Scholar 

  • Demeke, T., L.M. Kawchuk, and D.R. Lynch. 1993. Identification of potato cultivars and clonal variants by random amplified polymorphic DNA analysis. Am Potato J 70:561–570.

    Article  CAS  Google Scholar 

  • Demeke, T., D.R. Lynch, L.M. Kawchuk, G.C. Kozub, and J.D. Armstrong. 1996. Genetic diversity of potato determined by random polymorphic DNA analysis. Plant Cell Rep 15:662–667.

    Article  CAS  Google Scholar 

  • Gebhardt, C., E. Ritter, A. Barone, T. Debener, B. Walkemeier, U. Schachtschabel, H. Kaufmann, R.D. Thompson, M.W. Bonierbale, M.W. Ganal, S.D. Tanksley, and F. Salamini. 1991. RFLP maps of potato and their alignment with the homologous tomato genome. Theor Appl Genet 83:49–57.

    Article  Google Scholar 

  • Halldén, C., M. Hansen, N.-O. Nilsson, A. Hjerdin, and T. Säll. 1996. Competition as a source of errors in RAPD analysis. Theor Appl Genet 93:1185–1192.

    Article  Google Scholar 

  • Horn, P. and A. Rafalski. 1992. Non-destructive RAPD genetic diagnostics of microspore-derivedBrassica embryos. Plant Mol Biol Rep 10:285–293.

    Article  CAS  Google Scholar 

  • Karrer, E.E., J.E. Lincoln, S. Hogenhout, A.B. Benette, R.M. Bostock, B. Martineau, W.J. Lucas, D.G. Gilchrist, and D. Alexander. 1995.In situ isolation of mRNA from individual plant cells: Creation of cell-specific cDNA libraries. Proc Natl Acad Sci USA 92:3814–3818.

    Article  PubMed  CAS  Google Scholar 

  • Leeflang, E.P., M.S. McPeek, and N. Arnheim. 1996. Analysis of meiotic segregation using single sperm typing: Meiotic derive at the myotonic dystrophy locus. Am J Hum Genet 59:896–904

    PubMed  CAS  Google Scholar 

  • Levin, I. and N. Gilboa. 1997. Direct PCR using tomato pollen grain suspensions. BioTechniques. 23:986–990.

    PubMed  CAS  Google Scholar 

  • Lowe, A.J., O. Hanotte, and L. Guarino. 1996. Standardization of molecular genetic techniques for the characterization of germplasm collection’s: The case of random amplified polymorphic DNA (RAPD). Plant Genet Resour Newsl 107:50–54.

    Google Scholar 

  • Novy, R.G., C. Kobak, J. Goffreda, and N. Vorsa. 1994. RAPDs identify varietal misclassification and regional divergence in cranberry [Vaccinium macrocarpon (Ait.) Pursh]. Theor Appl Genet 88:1004–1010.

    Article  CAS  Google Scholar 

  • van Oppen, M.J.H., H. Klerk, M. de Graaf, W.T. Stam, and J.L. Olsen. 1996. Assessing the limits of random amplified polymorphic DNAs (RAPDs) in seaweed biogeography. J Phycol 32:433–444.

    Article  Google Scholar 

  • Ortiz, R. and S.J. Peloquin. 1994. Use of 24-chromosome potatoes (diploids and dihaploids) for genetic analysis.In: Bradshaw, J.E., Mackay, G.R. (eds) Potato genetics. CAB International, Cambridge, pp. 133–154.

    Google Scholar 

  • Petersen, G., B. Johansen, and O. Seberg. 1996. PCR and sequencing from single pollen grain. Plant Mol Biol 31:189–191.

    Article  PubMed  CAS  Google Scholar 

  • Tai, G.C.C. 1994. Use of2n gametes, pp. 133–154.In: J.E. Bradshaw, G.R. Mackay (eds). Potato genetics. CAB International, Cambridge.

    Google Scholar 

  • Tanksley, S.D., M.W. Ganal, J.P. Prince, M.C. de Vicente, M.W. Bonierbale, P. Broun, T.M. Fulton, J.J. Giovannoni, S. Grandillo, G.B. Martin, R. Messeguer, J.C. Miller, L. Miller, A.H. Paterson, O. Pineda, M.S. Rπder, R.A. Wing, W. Wu, and N.D. Young. 1992. High-density molecular linkage maps of tomato and potato genomes. Genetics 132:1141–1160.

    PubMed  CAS  Google Scholar 

  • Williams, J.G.K., A.R. Kubelik, K.J. Livak, J.A. Rafalski, and S.V. Tingey. 1990. DNA polymorphism amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Res 18:6531–6535.

    Article  PubMed  CAS  Google Scholar 

  • Yamagishi, M., M. Yano, Y. Fukuta, K. Fukui, M. Otani, and T. Shimada. 1996. Distorted segregation of RFLP markers in regenerated plants derived from anther culture of an F1 hybrid rice. Genes Genet Syst 71:37–41.

    Article  CAS  Google Scholar 

  • Yang, X. and C. Quiros. 1993. Identification and classification of celery cultivars with RAPD markers. Theor Appl Genet 86:205–212.

    Article  Google Scholar 

  • Zhang, I., X. Cui, K. Schmitt, R. Hubert, W. Havidi, and N. Arnheim. 1992. Whole genome amplification from a single cell: Implication for genetic analysis. Proc Natl Acad Sci USA 89:5847–5851.

    Article  PubMed  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Janet E. A. Seabrook.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Aziz, A.N., Seabrook, J.E.A. & Tai, G.C.C. Amplification of RAPD markers from single pollen grains of diploid (2N=2X=24) potato. Am. J. Pot Res 76, 179–182 (1999). https://doi.org/10.1007/BF02854219

Download citation

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF02854219

Additional Key Words

Navigation