Skip to main content
Log in

Molecular diversity of the 5S rRNA gene in cultivated and wild rice species

  • Published:
Wuhan University Journal of Natural Sciences

Abstract

We have used the polymerase chain reaction to analyze variation in the size of 5S ribosomal gene spacer sequence. Eighty accessions, including 65 cultivated rice and 15 wild rice, were analyzed. Among them seven size classes of 5S DNA spacer were observed. Classification asindica orjaponica on the basis of 5S DNA spacer patterns generally agrees with classification based on morphological studies, indicating that the length polymorphism of 5S DNA spacer could be used as a molecular marker for taxonomic and phylogenetic analysis.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  1. Scols G J, Gill B S, Xin Z Y,et al. Frequent duplication and deletion events in the 5S RNA genes and the associated spacer region in the Trticease.Pl Syst Evol, 1988,160:105–112.

    Article  Google Scholar 

  2. Doyle J J, Brown A H D. 5S ribosomal gene variation in the Glycine tomentalla polyploid complex (leguminosae).Syst Bot, 1989,14:398–407.

    Article  Google Scholar 

  3. Dvorak J, Zhang H B, Kota R S,et al. Origination and evolution of the 5S ribosomal RNA gene family in wheat and related species.Genome, 1989,32:1003–1016.

    Google Scholar 

  4. Reddy P, Apples R. A second locus for the 5S multigene family in secale L: Sequence divergence in two lineages of the family.Genome, 1989,32:456–467

    Google Scholar 

  5. Cox A V, Bennet M D, Dyer T A. Use of the polymerase chain reaction to detect spacer size heterogenecity in plant 5S rRNA gene clusters and to locate such clusters in wheat.Theor Appl Genet, 1992,83:684–690

    Article  Google Scholar 

  6. Moran G F, Smith D, Bell J C,et al. The 5S rRNA genes in pinus ratiata and the the spacer region as a probe for relationships between pinus species.Pl Syst Evol species Pl Syst Evol, 1992,183:209–221

    Google Scholar 

  7. Baum B R, Johnson D A. The 5S rRNA gene units in ancestral two-rowed barley.Genome, 1996,39:140–149.

    Article  Google Scholar 

  8. Klassen G R. 5S rRNA genes spacers as species-specific probes for eight species of pythum.Phytopathology, 1996,86:581–587.

    Article  Google Scholar 

  9. Hu J, Quiros C F. Identification of broccoli and cauliflower cultivars species of with RAPD markers.Plant Cell Report, 1991,10:505–511

    Google Scholar 

  10. Bassam B J, Caetano-Anoiles G, Gresshoff P M. Fast and sensitive silver staining of DNA in polyacrylamide gel.Anal Biochem, 1991,196:80–83

    Article  Google Scholar 

  11. Mclntyre C L, Winberg B, Houchins K,et al. Relationships between oryza species (poacese) based on 5S DNA sequences.Pl Syst Evol, 1992,183:249–264

    Article  Google Scholar 

  12. Yi Q M, Liu G P. Spacer length variation in rice 5S rRNA genes reveated by polymerase chain reaction.Wuhan University Journal of Natural Sciences, 1997,2 (1):124–126

    Article  Google Scholar 

  13. Cheng K S, Wang X K, Zhou J W,et al. A revised classification of Asian cultivated rice.Chese Acta Agron Sin, 1984,42, 271–280

    Google Scholar 

  14. Glaszmann J C. Isozymes and classification of Asian rice.Theo Appl Genet, 1987,74: 21–30

    Article  Google Scholar 

  15. Second G. Origion of the genic diversity of cultivated rice (Oryza sppl.): Study of the polymorphism scored at 40 isozyme loci.Jan J Genet, 1982,57:25–57

    Article  Google Scholar 

  16. Kanazin V, Ananiev E, Blake T. The genetics of 5S rRNA encoding multigene families in barley.Genome, 1993,36:1023–1028

    Article  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Additional information

Supported by the National Natural Science Fundation of China

Yi Qingming: born in Apr. 1938, Professor

Rights and permissions

Reprints and permissions

About this article

Cite this article

Qingming, Y., Zongping, X. & Pingrong, Y. Molecular diversity of the 5S rRNA gene in cultivated and wild rice species. Wuhan Univ. J. Nat. Sci. 3, 119–122 (1998). https://doi.org/10.1007/BF02827530

Download citation

  • Received:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF02827530

Key words

Navigation