Abstract
To detect exogenous genes in genetically modified plants, we have designed a multiplex polymerase chain reaction (MPCR) system that includes 7 primer pairs. With this method, the promoter, terminator, selection gene, reporter gene, and function gene can be detected simultaneously. The concentrations of each primer were optimized according to AT/TA%. Several genes in plasmid PBI121, genetically modified tobacco, and imported soybeans were detected, and the results were consistent with standard PCR. The method was sensitive enough to detect a single copy sequence.
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Abbreviations
- 2 x MPCR:
-
MPCR with 2 primer pairs
- GMP:
-
genetically modified plant
- MPCR:
-
multiplex PCR
References
Bej AK, Mahbubani MH, Miller R, DiCesare JL, Haft L and Atlas RM (1990) Multiplex PCR amplification and immobilized capture probes for detection of bacterial pathogens and indicators in water. Mol Cell Probes 4: 353–365.
Chamberlain JS, Gibbs RA, Ranier JE, Nguyen PN, and Caskey CT (1988) Deletion screening of the Duchenne muscular dystrophy locus via multiplex DNA amplification. Nucleic Acids Res 16(23): 11141–11156.
Cummins J (2000) Hazardous CaMV promoter? Nat Biotechnol 18: 363.
Freier SM, Kierzek R, Jaeger JA, Sugimoto N, Caruthers MH, Neilson T, and Turner DH (1986) “Improved free-energy parameters for predictions of RNA duplex stability? Proc Natl Acad Sci USA 83: 9373–9377.
Gilmore R (2000) Agbiotech and world food security—threat or boon? Nat Biotechnol 18: 361.
Gu HY, Qu LJ, Ming XT, Pan NS, and Chen ZL (1995) Plant Genes and Molecular Manipulations. PP5. Beijing University Press, Beijing, China.
Hodgson J (2000) Scientists avert new GMO crisis. Nat Biotechnol 18: 13.
James C (2000) Global review of commercialized transgenic crops: 1999. Sheng Wu Ji Shu Tong Bao 3: 39–41 (Chinese).
James D (1999) A simple and reliable protocol for the detection of apple stem grooving virus by RT-PCR and in a multiplex PCR assay. J Virol Methods 83: 1–9.
Jia SR (1997a) Biotechnology and biosafety of food. Sheng Wu Ji Shu Tong Bao 1: 4–9 (Chinese).
Jia SR (1997b) Environment and food biosafety assessment of transgenic plants. Sheng Wu Gong Cheng Jin Zhan 7(6): 37–42 (Chinese).
Jia SR (1999) The nature of current debate on biosafety of genetically modified crops. Sheng Wu Ji Shu Tong Bao 6: 1–7, 38 (Chinese).
Johnson B and Hope A (2000) GM crops and equivocal environmental benefits. Nat Biotechnol 18: 242.
Kota R, Holton TA, and Henry RJ (1999) Detection of transgenes in crop plants using molecular beacon assays. Plant Mol Biol Rep 17: 363–370.
Labuda D, Krajinovic M, Richer C, Skoll A, Sinnett H, Yotova V, and Sinnett D (1999) Rapid detection of CYP1A1, CYP2D6 and NAT variants by multiplex polymerase chain reaction and allele-specific oligonucleotide assay. Anal Biochem 275: 84–92.
Liu YG, Liu H, and Xie BD (1999) Detection of gene deletions in Chinese patients with Duchenne/Becker muscular dystrophy using CDNA probes and the polymerase chain reaction method. Life Sci 65(9): 863–869.
Markus L, Brodmann P, Pietsch K, Pauwels J, and Anklam E (1999) IUPAC collaborative trial study of a method to detect genetically modified soy beans and maize in dried powder. Food composition and additives 82(4): 923–928.
Millstone E, Brunner E, and Mayer S (1999) Beyond substantial equivalence. Nature 401(7): 525.
Morral N and Estivill X (1992) Multiplex PCR amplification of three microsatellites within the CFTR gene. Genomics 51: 1362–1364.
Nigh R (2000) Transgenic crops: A cautionary tale. Science 287: 1927–1928.
Perlak FJ, Fuchs RL, Dean DA, McPherson SL, and Fischhoff DA (1991) Modification of the coding sequence enhances plant expression of insect control protein genes. Proc Natl Acad Sci USA 88: 3324–3328.
Rychlik W (1993) Selection of Primers for Polymerase Chain Reaction. In: White BA (ed), Methods in molecular Biology, Vol. 15: PCR Protocols: Current Methods and Applications. pp 35–36, Humana Press Inc., Totowa, New Jersey.
Stewart CN Jr and Wheaton SK (2001) GM crop data-agronomy and ecology in tandem. Nat Biotechnol 19: 3.
Shuber AP, Grondin VJ, and Klinger KW (1995) A simplified procedure for developing multiplex PCRs. Genome Res 5: 488–493.
Tao Z, Yang SL, and Gong Y (2000) Rapid Detection of Genetically Modified Plants with MPCR. Sheng Wu Ji Shu Tong Bao 6: 37–41 (Chinese).
Vandenvelde C, Verstraete M, and Beers DV (1990) Fast multiplex polymerase chain reaction on boiled clinical samples for rapid viral diagnosis. J Virol Methods 30: 215–228.
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Tao, Z., Cai, XF., Yang, SL. et al. Detection of exogenous genes in genetically modified plants with multiplex polymerase chain reaction. Plant Mol Biol Rep 19, 289–298 (2001). https://doi.org/10.1007/BF02772827
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DOI: https://doi.org/10.1007/BF02772827