Skip to main content
Log in

Modified AFLP analysis method for species with small genomes

  • Protocols
  • Published:
Plant Molecular Biology Reporter Aims and scope Submit manuscript

Abstract

A modified method for detecting amplified fragment length polymorphism (AFLP) has been developed for species with small genomes. We successfully used a combination of primers with a reduced number of selective bases to differentiate and fingerprint isolates ofColletotrichum acutatum, the causative agent of strawberry black spot, an important strawberry disease.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

Abbreviations

AFLP:

amplified fragment length polymorphism

References

  • Angiolillo A, Mencuccini M, and Baldoni L (1999) Olive genetic diversity assessed using amplified fragment length polymorphisms. TAG 98: 411–421.

    Article  CAS  Google Scholar 

  • Hartl L and Seefelder S (1998) Diversity of selected hop cultivars detected by fluorescent AFLPs. TAG 96: 112–116.

    Article  CAS  Google Scholar 

  • Kuiper MTR (1996) Building a high density genetic map using the AFLPTM technology. Methods in Molecular Biology 82: Arabidopsis Protocols, J. Martinez-Zapater and J. Salinas, Humana Press Inc., Totowa, New Jersey.

    Google Scholar 

  • Lerceteau E and Szmidt AE (1999) Properties of AFLP markers in inheritance and genetic diversity studies inPinus sylvestris L. Heredity 82: 252–260.

    Article  PubMed  CAS  Google Scholar 

  • O'Neill NR, van Berkum P, Lin J, Kuo J, Ude GN, Kenworthy W, and Saunders JA (1997) Application of amplified fragment length polymorphism for genetic characterization ofColletotrichum pathogens of alfalfa. Phytopathology 87: 745–750.

    Article  PubMed  Google Scholar 

  • Sambrook J, Fritsch EF, and Maniatis J (1989) Molecular Cloning. A Laboratory Manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York.

    Google Scholar 

  • Vos P, Hogers R, Bleeker M, Reijans M, Lee TV, Hornes M, Frijters A, Pot J, Peleman J, Kuiper M, and Zabeau M (1995) AFLP: a new technique for DNA fingerprinting. Nucl Acids Res 23: 4407–4414.

    Article  PubMed  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Celia M. James.

Rights and permissions

Reprints and permissions

About this article

Cite this article

James, C.M., Lesemann, S.S. & Down, G.J. Modified AFLP analysis method for species with small genomes. Plant Mol Biol Rep 21, 303–307 (2003). https://doi.org/10.1007/BF02772806

Download citation

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF02772806

Key words

Navigation