Abstract
Different hypotheses of the structure of platelet-activating factor (PAF) receptor based on structure-activity relationships of agonists and antagonists are reviewed. For an agonistic effect, strong hydrophobic interactions and an ether function are required in position-1 of the glycerol backbone; chain length limitations and steric hindrance demand a small group in position-2. The unusual structural properties of non-PAF-like antagonists required 3-D electrostatic potential calculations. This method applied to seven potent antagonists suggests a strong “Cache-oreilles” (ear-muff) effect,i.e., two strong electronegative wells (isocontour at −10 Kcal/mole) are located at 180° to each other and at a relatively constant distance. Initial consideration of the “Cache-oreilles” effect implied the structure of a bipolarized cylinder of 10–12 Å diameter for the receptor. However, very recent results on studies with agonists and antagonists structurally similar to PAF suggest that the receptor may in fact be a multi-polarized cylinder.
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Abbreviations
- 3-D:
-
three-dimensional (electrostatic potential map)
- PAF:
-
platelet-activating factor
- QSAR:
-
quantitative structure activity relationship
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Godfroid, J.J., Dive, G., Lamotte-Brasseur, J. et al. PAF receptor structure: A hypothesis. Lipids 26, 1162–1166 (1991). https://doi.org/10.1007/BF02536523
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DOI: https://doi.org/10.1007/BF02536523