Summary
The occurrence of bacterial promoter-like sequences was shown in the divergent region ofCrithidia oncopelti maxicircular kinetoplast DNA. A promoter-cloning vector based on the neomycin phosphotransferase II (NPT II) gene was used to localize promoters in three homologous blocks of repeated sequences. The elements found displayed greater promoter strength inEscherichia coli than the normal promoter of the NPT II gene. Sequences of three promoter-containing inserts from different blocks were determined and typical prokaryotic promoter sequences were localized.
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Abbreviations
- bp:
-
base pairs
- mtDNA:
-
mitochondrial DNA
- kb:
-
kilobase pairs
- kDNA:
-
kinetoplast DNA
- MkDNA:
-
maxicircle kinetoplast DNA
- SDS:
-
sodium dodecyl sulphate
- SSC:
-
150 mM
- NaCl:
-
15 mM Na citrate
References
Alwine JC, Kemp DJ, Stark GR (1977) Method for detection of specific RNAs in agarose gel by transfer to diazobenzyloxymethyl paper and hybridization with DNA probes. Proc Natl Acad Sci USA 74:5350–5354
Aoyama T, Takanami M, Ohtsuka E, Taniyama Y, Marumoto R, Sato H, Ikehara M (1983) Essential structure ofE. coli promoter. Effect of spacer length between the two consensus sequences on promoter function. Nucleic Acids Res 11:6855–6864
Beck E, Ludwig G, Auerswald EA, Reiss B, Schaller H (1982) Nucleotide sequence and exact localization of the neomycin phosphotransferase gene from transposon Tn5. Gene 19:327–336
Birnboim HC, Doly J (1979) A rapid alkaline procedure for screening recombinant plasmid DNA. Nucleic Acids Res 7:1513–1523
Borst P, Fairlamb A, Fase-Fowler F, Hoeijmakers JHJ, Weislogel P (1976) The structure of kinetoplast DNA. In: Saccone C, Kroon AM (eds) The genetic function of mitochondrial DNA. Elsevier, Amsterdam, pp 59–69
Borst P, Weijers PJ, Brakenhoff GJ (1982) Analysis by electron microscopy of the variable segment in the maxi-circle of kinetoplast DNA fromTrypanosoma brucei. Biochim Biophys Acta 699:272–280
Chang D, Clayton D (1984) Precise identification of individual promoters for transcription of each strand of human mitochondrial DNA. Cell 36:635–646
Christianson T, Rabinowitz M (1983) Identification of multiple transcriptional initiation sites on the yeast mitochondrial genome by in vitro capping with guanylyltransferase. J Biol Chem 258:14025–14033
Cohen SN, Chang ACY, Hsu CL (1972) Antibiotic resistance in bacteria: genetic transformation ofE. coli by R-factor DNA. Proc Natl Acad Sci USA 69:2110–2115
De la Cruz V, Neckelmann N, Simpson L (1984) Sequence of six genes and several open reading frames in the kinetoplast maxicircle DNA ofLeishmania tarentolae. J Biol Chem 259:15136–15146
Dretzen G, Bellard M, Sassone-Corsi P, Chambon P (1980) A reliable method for recovery of DNA fragments from agarose and acrylamide gels. Anal Biochem 112:259–301
Faye G, Kyjawa C, Dujon B, Bolotin-Fukuhara M, Wolf K, Fukuhara H, Slonimsky PP (1975) Localization of the gene coding for the mitochondrial I6S ribosomal RNA using rho− mutants ofSaccharomyces cerevisiae. J Mol Biol 99:203–217
Gütter P, Maslov DA, Kolesnikov AA (1985) The divergent region ofCrithidia oncopelti maxicircular kinetoplast DNA contains two types of repeated sequences. Dokl Akad Nauk SSSR 281:988–990
Hajduk SL, Klein VA, Englund PT (1984) Replication of kinetoplast DNA maxicircles. Cell 36:483–492
Hawley DK, McClure WR (1983) Complication and analysis ofEscherichia coli promoter DNA sequences. Nucleic Acids Res 11:2237–2255
Hoeijmakers JHJ, Borst P (1978) RNA from the trypanosomeCrithidia luciliae contains transcripts of the maxicircle and not of the minicircle component of kinetoplast DNA. Biochim Biophys Acta 521:407–411
Hughes D, Simpson L, Kayne PS, Neckelmann N (1984) Autonomous replication sequences in maxicircle kinetoplast DNA ofLeishmania tarentolae. Mol Biochem Parasitol 13:263–276
Kuzmin EV, Tarassoff IA, Zaitseva GN (1985) Kinetoplast DNA segments function as promoters inEscherichia coli cells. Mol Gen Genet 198:323–328
Maslov DA, Kolesnikov AA, Zaitseva GN (1984) Conservative and divergent base sequences regions in the maxicircle kinetoplast DNA of several trypanosomatid flagellates. Mol Biochem Parasitol 12:351–364
Maslov DA, Entelis NS, Kolesnikov AA, Zaitseva GN (1982)Crithidia oncopelti kinetoplast DNA. Restriction map of the maxicircle DNA. Bioorgan Khimiya (Russian) 8:676–685
Maxam AM, Gilbert W (1977) A new method for sequencing DNA. Proc Natl Acad Sci USA 74:560–565
Mett IL, Kuzmin EV, Zaitseva GN (1981) Localization of two genes for RNAs on maxicircular kinetoplast DNA from the zooflagellateCrithidia oncopelti. Dokl Akad Nauk SSSR 261:1274–1276
Muhich M, Neckelmann N, Simpson L (1983) Comparison of maxicircle DNAs ofLeishmania tarentolae undTrypanosoma brucei. Proc Natl Acad Sci USA 80:4060–4064
Muhich M, Simpson L, Simpson A (1985) The divergent region of theLeishmania tarentolae kinetoplast maxicircle DNA contains a diverse set of repetitive sequences. Nucleic Acids Res 13:3241–3259
Parnes JR, Velan B, Felsenfeldt A, Ramanathan L, Ferrin U, Appele E, Seidman JE (1981) Mouseβ 2-microglobulin cDNA clones, a screening procedure for cDNA clones corresponding to rare mRNAs. Proc Natl Acad Sci USA 78:2253–2257
Reiss B, Sprengel R, Schaller H (1984) Protein fusions with the kanamycin resistance gene from transposon Tn5. EMBO J 3:3317–3322
Rigby PWS, Dieckman M, Rhodes C, Berg P (1977) Labelling deoxyribonucleic acids to high specific activityin vitro by nicktranslation with DNA polymerase I. J Mol Biol 113:237–251
Simpson L, Simpson A (1978) Kinetoplast RNA ofLeishmania tarentolae. Cell 14:169–178
Sutcliffe JC (1979) Complete nucleotide sequence of the plasmid ofEscherichia coli pBR322. Cold Spring Harbor Symp Quant Biol 43:77–91
Yanisch-Perron C, Vieira J, Messing J (1985) Improved M13 phage cloning vectors and host strains: nucleotide sequence of the M13 mp18 and pUC19 vectors. Gene 33:103–119
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Communicated by D. Goldfarb
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Tarassoff, I.A., Kuzmin, E.V., Levchenko, I.V. et al. Repeated sequences with unusual properties from the divergent region ofCrithidia oncopelti maxicircle kinetoplast DNA. Molec. Gen. Genet. 205, 122–126 (1986). https://doi.org/10.1007/BF02428041
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DOI: https://doi.org/10.1007/BF02428041