Skip to main content

A series of repetitive DNA sequences are associated with human core and H1 histone genes

Summary

Repetitive DNA sequences, derived from the human β-globin gene cluster, were mapped within a series of human genomic DNA segments containing core (H2A, H2B, H3 and H4) and H1 histone genes. Cloned recombinant λCH4A phage with human histone gene inserts were analyzed by Southern blot analysis using the following32P-labeled (nick translated) repetitive sequences as probes:Alu I,Kpn I and LTR-like. A cloned DNA designated RS002-5′C6 containing (i)a (TG)16 simple repeat, (ii) an (ATTTT)n repeat and (iii)a 52 base pair alternating purine and pyrimidine sequence was also used as a radiolabelled hybridization probe. Analysis of 12 recombinant phage, containing 6 arrangements of core histone genes, indicated the presence ofAlu I,Kpn and RS002-5′C6 repetitive sequences. In contrast, analysis of 4 human genomic DNA segments, containing both core and H1 histone genes, indicated the presence of onlyAlu I family sequences. LTR-like sequences were not detected in association with any of the core or H1 histone genes examined. These results suggest that human histone and β-globin genes share certain aspects of sequence organization in flanking regions despite marked differences in their overall structure and pattern of expression.

This is a preview of subscription content, access via your institution.

References

  1. Schmid CW, Deininger PL: Cell 6:345–358, 1975.

    Article  CAS  PubMed  Google Scholar 

  2. Houck CM, Rinehart FP, Schmid CW: J Mol Biol 132:289–306, 1979.

    Article  CAS  PubMed  Google Scholar 

  3. Lewin B: Gene Expression 2, Second Edition, Eukaryotic Chromosomes, Wiley, New York, 1980.

    Google Scholar 

  4. Pearson WR, Wu JR, Bonner J: Biochem 17:51–59, 1978.

    Article  CAS  Google Scholar 

  5. Wilkes MM, Pearson WR, Wu JR, Bonner J: Biochem 17:60–69, 1978.

    Article  CAS  Google Scholar 

  6. Schmid CW, Jelinek WR: Science 216:1065–1070, 1982.

    CAS  PubMed  Google Scholar 

  7. Jagadeeswaran P, Forget BG, Weissman SM: Cell 26:141–142, 1981.

    Article  CAS  PubMed  Google Scholar 

  8. Calabretta B, Robberson DL, Barrera-Saldana HA, Lambrou TP, Saunders GF: Nature 296:219–225, 1982.

    Article  CAS  PubMed  Google Scholar 

  9. Rinehart PF, Ritch GT, Deininger LP, Schmid WC: Biochem 20:3003–3010, 1980.

    Article  Google Scholar 

  10. Miyake T, Migita K, Sakaki Y: Nucl Acids Res 11:6837–6846, 1983.

    CAS  PubMed  Google Scholar 

  11. Adams JM, Kaufman RE, Kretschmer PJ, Harrison M, Nienhuis AW: Nucl Acids Res 8:6113–6128, 1980.

    CAS  PubMed  Google Scholar 

  12. Shafit-Zugardo B, Malo JJ, Brown FL: Nucl Acids Res 10:3175–3193, 1982.

    Google Scholar 

  13. Sun L, Paulson KE, Schmid CW, Kadyk L, Leinwand L: Nucl Acids Res 12:2669–2690, 1984.

    CAS  PubMed  Google Scholar 

  14. Varmus HE: Science 216:812–820, 1982.

    CAS  PubMed  Google Scholar 

  15. Collins FS, Weisman SM: The Molecular Genetics of Human Hemoglobin, Progress in Nucleic Acid Research and Molecular Biology, Academic Press, inc. New York, 1984.

    Google Scholar 

  16. Sierra F, Lichtler A, Marashi F, Rickles R, Van Dyke T, Clark S, Wells J, Stein G, Stein J: Proc Natl Acad Sci USA 79:1795–1799, 1982.

    CAS  PubMed  Google Scholar 

  17. Gross K, Schaffner W, Telford J, Birnstiel M: Cell 8:479–484, 1976.

    Article  CAS  PubMed  Google Scholar 

  18. Wu M, Holmes DS, Davidson N, Cohn RH, Kedes LH: Cell 9:163–169, 1976.

    Article  CAS  PubMed  Google Scholar 

  19. Lifton RP, Goldberg ML, Karp RW, Hogness DS: Cold Spring Harbor Symp Quant Biol 42:1047–1051, 1977.

    Google Scholar 

  20. Kedes LH: Ann Rev Bochem 48:837–870, 1979.

    Article  CAS  Google Scholar 

  21. Marashi F, Baumbach L, Rickles R, Sierra F, Stein JL, Stien GS: Science 215:683–685, 1982.

    CAS  PubMed  Google Scholar 

  22. Sierra F, Leza A, Marashi F, Plumb M, Rickles R, Van Dyke T, Clark S, Wells J, Stein GS, Stein JL: Biochem Biophys Res Comm 104:785–792, 1982.

    Article  CAS  PubMed  Google Scholar 

  23. Birnboim HC, Doly J: Nucl Acids Res 7:1513–1523, 1979.

    CAS  PubMed  Google Scholar 

  24. Ish-Horowicz DD, Burke JF: Nucl Acids Res 9:2989–2998, 1981.

    CAS  PubMed  Google Scholar 

  25. Carozzi M, Marashi F, Plumb M, Zimmerman S, Zimmerman A, Wells JRE, Stein G, Stein J: Science 224:1115–1117, 1984.

    CAS  PubMed  Google Scholar 

  26. Zwollo P, Stein GS, Stein JL: Biochem Biophys Res Comm 124:988–993, 1984.

    Article  CAS  PubMed  Google Scholar 

  27. Maniatis T, Fritsch EF, Sambrook J: Molecular Cloning, A Laboratory Manual, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, 1982.

    Google Scholar 

  28. Maniatis T, Jeffrey A, Kleid DG: Proc Natl Acad Sci USA 72:1184–1188, 1975.

    CAS  PubMed  Google Scholar 

  29. Southern EM: J Mol Biol 98:503–517, 1975.

    CAS  PubMed  Google Scholar 

  30. Strayer D, Heintz N, Roeder R, Gillespie D: Proc Natl Acad Sci USA 80:4770–4774, 1983.

    CAS  PubMed  Google Scholar 

  31. Jelinek R, Toomey TP, Leinwand L, Duncan CH, Biro PA, Choudary PV, Weissman SM, Rubin CM, Houck CM, Deininger PL, Schmid CM: Proc Natl Acad Sci USA 77:1398–1402, 1980.

    CAS  PubMed  Google Scholar 

  32. Ariga H: Mol Cell Biol 4:1476–1482, 1984.

    CAS  PubMed  Google Scholar 

  33. Grimald G, Singer MF: Nucl Acids Res 11:321–338, 1983.

    Google Scholar 

  34. Manley JL, Colozzo MT: Nature 300:376–379, 1982.

    Article  CAS  PubMed  Google Scholar 

  35. Hess JF, Schmid CW, Shen C-KJ: Science 226:67–70, 1984.

    CAS  PubMed  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and Permissions

About this article

Cite this article

Collart, D., Stein, G.S. & Stein, J.L. A series of repetitive DNA sequences are associated with human core and H1 histone genes. Mol Cell Biochem 67, 161–170 (1985). https://doi.org/10.1007/BF02370175

Download citation

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF02370175

Keywords

  • histone genes
  • globin gene cluster
  • repetitive sequences
  • sequence organization