Summary
Repetitive DNA sequences, derived from the human β-globin gene cluster, were mapped within a series of human genomic DNA segments containing core (H2A, H2B, H3 and H4) and H1 histone genes. Cloned recombinant λCH4A phage with human histone gene inserts were analyzed by Southern blot analysis using the following32P-labeled (nick translated) repetitive sequences as probes:Alu I,Kpn I and LTR-like. A cloned DNA designated RS002-5′C6 containing (i)a (TG)16 simple repeat, (ii) an (ATTTT)n repeat and (iii)a 52 base pair alternating purine and pyrimidine sequence was also used as a radiolabelled hybridization probe. Analysis of 12 recombinant phage, containing 6 arrangements of core histone genes, indicated the presence ofAlu I,Kpn and RS002-5′C6 repetitive sequences. In contrast, analysis of 4 human genomic DNA segments, containing both core and H1 histone genes, indicated the presence of onlyAlu I family sequences. LTR-like sequences were not detected in association with any of the core or H1 histone genes examined. These results suggest that human histone and β-globin genes share certain aspects of sequence organization in flanking regions despite marked differences in their overall structure and pattern of expression.
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References
Schmid CW, Deininger PL: Cell 6:345–358, 1975.
Houck CM, Rinehart FP, Schmid CW: J Mol Biol 132:289–306, 1979.
Lewin B: Gene Expression 2, Second Edition, Eukaryotic Chromosomes, Wiley, New York, 1980.
Pearson WR, Wu JR, Bonner J: Biochem 17:51–59, 1978.
Wilkes MM, Pearson WR, Wu JR, Bonner J: Biochem 17:60–69, 1978.
Schmid CW, Jelinek WR: Science 216:1065–1070, 1982.
Jagadeeswaran P, Forget BG, Weissman SM: Cell 26:141–142, 1981.
Calabretta B, Robberson DL, Barrera-Saldana HA, Lambrou TP, Saunders GF: Nature 296:219–225, 1982.
Rinehart PF, Ritch GT, Deininger LP, Schmid WC: Biochem 20:3003–3010, 1980.
Miyake T, Migita K, Sakaki Y: Nucl Acids Res 11:6837–6846, 1983.
Adams JM, Kaufman RE, Kretschmer PJ, Harrison M, Nienhuis AW: Nucl Acids Res 8:6113–6128, 1980.
Shafit-Zugardo B, Malo JJ, Brown FL: Nucl Acids Res 10:3175–3193, 1982.
Sun L, Paulson KE, Schmid CW, Kadyk L, Leinwand L: Nucl Acids Res 12:2669–2690, 1984.
Varmus HE: Science 216:812–820, 1982.
Collins FS, Weisman SM: The Molecular Genetics of Human Hemoglobin, Progress in Nucleic Acid Research and Molecular Biology, Academic Press, inc. New York, 1984.
Sierra F, Lichtler A, Marashi F, Rickles R, Van Dyke T, Clark S, Wells J, Stein G, Stein J: Proc Natl Acad Sci USA 79:1795–1799, 1982.
Gross K, Schaffner W, Telford J, Birnstiel M: Cell 8:479–484, 1976.
Wu M, Holmes DS, Davidson N, Cohn RH, Kedes LH: Cell 9:163–169, 1976.
Lifton RP, Goldberg ML, Karp RW, Hogness DS: Cold Spring Harbor Symp Quant Biol 42:1047–1051, 1977.
Kedes LH: Ann Rev Bochem 48:837–870, 1979.
Marashi F, Baumbach L, Rickles R, Sierra F, Stein JL, Stien GS: Science 215:683–685, 1982.
Sierra F, Leza A, Marashi F, Plumb M, Rickles R, Van Dyke T, Clark S, Wells J, Stein GS, Stein JL: Biochem Biophys Res Comm 104:785–792, 1982.
Birnboim HC, Doly J: Nucl Acids Res 7:1513–1523, 1979.
Ish-Horowicz DD, Burke JF: Nucl Acids Res 9:2989–2998, 1981.
Carozzi M, Marashi F, Plumb M, Zimmerman S, Zimmerman A, Wells JRE, Stein G, Stein J: Science 224:1115–1117, 1984.
Zwollo P, Stein GS, Stein JL: Biochem Biophys Res Comm 124:988–993, 1984.
Maniatis T, Fritsch EF, Sambrook J: Molecular Cloning, A Laboratory Manual, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, 1982.
Maniatis T, Jeffrey A, Kleid DG: Proc Natl Acad Sci USA 72:1184–1188, 1975.
Southern EM: J Mol Biol 98:503–517, 1975.
Strayer D, Heintz N, Roeder R, Gillespie D: Proc Natl Acad Sci USA 80:4770–4774, 1983.
Jelinek R, Toomey TP, Leinwand L, Duncan CH, Biro PA, Choudary PV, Weissman SM, Rubin CM, Houck CM, Deininger PL, Schmid CM: Proc Natl Acad Sci USA 77:1398–1402, 1980.
Ariga H: Mol Cell Biol 4:1476–1482, 1984.
Grimald G, Singer MF: Nucl Acids Res 11:321–338, 1983.
Manley JL, Colozzo MT: Nature 300:376–379, 1982.
Hess JF, Schmid CW, Shen C-KJ: Science 226:67–70, 1984.
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Collart, D., Stein, G.S. & Stein, J.L. A series of repetitive DNA sequences are associated with human core and H1 histone genes. Mol Cell Biochem 67, 161–170 (1985). https://doi.org/10.1007/BF02370175
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DOI: https://doi.org/10.1007/BF02370175
Keywords
- histone genes
- globin gene cluster
- repetitive sequences
- sequence organization