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Mapping of a new MAP kinase activated protein kinase gene (3PK) to human chromosome band 3p21.2 and ordering of 3PK and two cosmid markers in the 3p22–p21 tumour-suppressor region by two-colour fluorescencein situ hybridization

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Abstract

ANotl-linking clone NL1-210 (D3S1656) that contains the human MAP kinase activated protein kinase (3PK) gene was localized to 3p21.2 on DAPI-banded and propidium iodide (R-bands)-stained chromosomes by fluorescencein situ hybridization (FISH). For more precise localization of 3PK, two cosmid probes were used as a frame. In order to establish this frame, twoNotl-linking clones, NL2-008 (D3S1648) and NL3-003 (D3S3872) were used to screen the cosmid library for locus extension. They mapped to 3p21 and were found to belong to two separate contigs ofNotl-jumping and linking clones. Using FISH on DAPI-banded metaphase chromosomes, we have determined the precise localization of cosNL2-008 and cosNL3-003 to 3p21.2–p21.1 and 3p22–p21.3 respectively. The 3PK gene was localized to the 3p21.2 region within this frame by two-colour FISH. The orientation of the probes are tel-D3S3872-3PK-D3S1648-cen.

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References

  • Bajalica S, Brondum-Nielsen K, Sorensen A-Get al. (1995) Characterization of add(I)(p36) in non-Hodgkin lymphomas by fluorescencein situ hybridization.Genes Chrom Cancer 13: 34–39.

    Google Scholar 

  • Bergerheim U, Nordenskjöld M, Collins P V (1989) Deletion mapping in human renal cell carcinoma.Cancer Res 49: 1390–1396.

    Google Scholar 

  • Boldog F, Arheden K, Imreh Set al. (1991) Involvement of 3p deletion in sporadic and hereditary forms of renal cell carcinoma.Genes Chrom Cancer 3: 403–406.

    Google Scholar 

  • Foster K, Crossey P A, Cairns Pet al. (1994) Molecular genetic investigation of sporadic renal cell carcinoma: analysis of allele loss on chromosomes 3p, 5q, 11p, 17 and 22.Br J Cancer 69: 230–234.

    Google Scholar 

  • Hibi K, Takahashi T, Yamakawa Ket al. (1992) Three distinct regions involved in 3p deletion in human lung cancer.Oncogene 7: 445–449.

    Google Scholar 

  • Imreh S, Kholodnyuk I, Allikmets Ret al. (1994) Nonrandom loss of human chromosome 3 fragments from mouse-human microcell hybrids following progressive growth in SCID mice.Genes Chrom Cancer 11: 237–245.

    Google Scholar 

  • Kashuba V I, Szeles A, Allikmets Ret al. (1995) A group ofNotI jumping and linking clones cover 2·5 MB in the 3p21–p22 region suspected to contain a tumour suppressor gene.Cancer Genet Cytogenet 8: 144–150.

    Google Scholar 

  • Kok K, van den Berg A, Veldhuis P Met al. (1994) A homozygous deletion in a small cell lung cancer cell line involving a 3p21 region with a marked instability in yeast artificial chromosomes.Cancer Res 54: 4183–4187.

    Google Scholar 

  • Kovács G, Erlandsson R Boldog F et al. (1988) Consistent chromosome 3p deletion and loss of heterozygosity in renal cell carcinoma.Proc Natl Acad Sci USA 85: 1571–1575.

    Google Scholar 

  • Larsson C, Weber G, Kvanta E et al. (1992) Isolation and mapping of polymorphic cosmid clones used for sublocalization of the multiple endrocrine neoplasia type 1 (MEN1) locus.Hum Genet 89: 187–193.

    Google Scholar 

  • Lothe R A, Fossa S D, Stenwig A E et al. (1989) Loss of 3p or 11p alleles is associated with testicular cancer tumours.Genomics 5: 134–138.

    Google Scholar 

  • Lubinski J, Hadaczek P, Podolski J et al. (1994) Common regions of deletion in chromosome 3p12 and 3p14.2 in primary clear cell renal carcinomas.Cancer Res 54: 3710–3713.

    Google Scholar 

  • Morita R, Ishikawa J, Tsutsumi M et al. (1994) Allelotype of renal cell carcinoma.Cancer Res 51: 820–823.

    Google Scholar 

  • Naylor S L, Johnson B E, Minna J D, Sakaguchi A Y (1987) Loss of heterozygosity of chromosome 3p markers in small cell lung cancer.Nature 29: 451–454.

    Google Scholar 

  • Pinkel D, Straume T, Gray J W (1986) Cytogenetic analysis using quantitative, high-sensitivity, fluorescence hybridization.Proc Natl Acad Sci USA 83: 2934–2938.

    Google Scholar 

  • Rabbits P, Bergh J, Douglas J, Collins F, Waters J (1990) A submicroscopic homozygous deletion at the D3S3 locus in a cell line isolated from a small cell lung carcinoma.Genes Chrom Cancer 2: 231–238.

    Google Scholar 

  • Sithanandam G, Latif F, Bernal R et al. (1995) 3PK, a new MAP kinase activated protein kinase, located in the small cell lung cancer tumour suppressor gene region.Mol Cell Biol 16: 868–876.

    Google Scholar 

  • Wang J-Y, Zabarovsky E R, Talmadge C et al. (1994) Somatic cell hybrid panel andNotI-linking clones for physical mapping of human chromosome 3.Genomics 20: 105–113.

    Google Scholar 

  • Yamakawa K, Morita R, Takahashi E et al. (1991) A detailed deletion mapping of the short arm of chromosome 3 in sporadic renal cell carcinoma.Cancer Res 51: 4707–4711.

    Google Scholar 

  • Yokoyama S, Yamakawa K, Tsuchiya E et al. (1992) Deletion mapping on the short arm of chromosome 3 in squamous cell carcinoma and adenocarcinoma of the lung.Cancer Res 52: 873–877.

    Google Scholar 

  • Zabarovsky E R, Boldog F, Thompson T et al (1990) Construction of a human chromosome 3 specificNotI-linking library using a novel cloning procedure.Nucleic Acids Res 18: 6319–6324.

    Google Scholar 

  • Zabarovsky E R, Kashuba V I, Pokrovskaya E S et al. (1993) Alu-PCR approach to isolateNotI-linking clones from the 3p14–p21 region frequently deleted in renal cell carcinoma.Genomics 16: 713–719.

    Google Scholar 

  • Zabarovsky E R, Kashuba V I, Kholodniuk I D et al. (1994) Rapid mapping ofNotI-linking clones with differential hybridization and Alu-PCR.Genomics 21: 486–489.

    Google Scholar 

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accepted for publication by G. Sutherland

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Szeles, A., Bajalica-Lagercrantz, S., Lindblom, A. et al. Mapping of a new MAP kinase activated protein kinase gene (3PK) to human chromosome band 3p21.2 and ordering of 3PK and two cosmid markers in the 3p22–p21 tumour-suppressor region by two-colour fluorescencein situ hybridization. Chromosome Res 4, 310–313 (1996). https://doi.org/10.1007/BF02263683

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  • DOI: https://doi.org/10.1007/BF02263683

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