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Amino-acid sequence comparison of nepovirus coat proteins

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Abstract

The amino acid sequence of the coat proteins of several nepoviruses was determined by a combination of peptide and nucleic acid sequencing (grapevine fanleaf virus, arabis mosaic virus, tomato blackring virus, grapevine chrome mosaic virus). These sequences were compared and showed homologies ranging from 10% to 69%, and 96.7% for the two arabis mosaic virus strains. 10% homology does not reflect any relationship between viruses, and our results implicate, that nepoviruses, considering the homology of the coat protein sequences of viruses as a parameter for virus taxonomy, may be divided into several subgroups.

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Steinkellner, H., Himmler, G., Sagl, R. et al. Amino-acid sequence comparison of nepovirus coat proteins. Virus Genes 6, 197–202 (1992). https://doi.org/10.1007/BF01703068

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  • DOI: https://doi.org/10.1007/BF01703068

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