Skip to main content
Log in

Nucleotide sequences and expression inEscherichia coli of the coat protein genes from two strains of melon necrotic spot virus

  • Brief Report
  • Published:
Archives of Virology Aims and scope Submit manuscript

Summary

The nucleotide sequences of coat protein (CP) genes of two Japanese strains of melon necrotic spot virus·(MNSV-NH and MNSV-S) were determined. The size of the CP genes of both strains was 1170 nucleotides. Comparisons of the deduced amino acid sequences among MNSV strains showed more than 95% homology, and those among other carmoviruses showed 31–34% homology. cDNAs of MNSV CP genes were cloned into anEscherichia coli expression fusion vector and MNSV-NH and MNSV-S CPs were successfully produced. Furthermore, synthetic oligonucleotide primers were used for differentiating MNSV strains by reverse transcription-polymerase chain reaction method.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

References

  1. Bos L, Van Dorst HJM, Huttinga H, Maat DZ (1984) Further characterization of melon necrotic spot virus causing severe disease in glasshouse cucumbers in the Netherlands and its control. Neth J Plant Pathol 90: 55–69

    Google Scholar 

  2. Carrington JC, Morris TJ, Stockley PG, Harrison SC (1987) Structure and assembly of turnip crinkle virus. IV. Analysis of the coat protein gene and implications of the subunit primary structure. J Mol Biol 194: 265–276

    Google Scholar 

  3. Carrington JC, Heaton LA, Zuidema D, Hillman BI, Morris TJ (1989) The genome structure of turnip crinkle virus. Virology 170: 219–226

    Google Scholar 

  4. Gubler U, Hoffman BJ (1983) A simple and very efficient method for generating cDNA libralies. Gene 25: 263–269

    Google Scholar 

  5. Guilley H, Carrington JC, Balàzs E, Jonard G, Richards K, Morris TJ (1985) Nucleotide sequence and genome organization of carnation mottle virus RNA. Nucleic Acids Res 13: 6663–6677

    Google Scholar 

  6. Harrison SC, Olson AJ, Schutt CE, Winkler FK, Brigogne G (1978) Tomato bushy stunt virus at 2.9 Å resolution. Nature 276: 368–373

    Google Scholar 

  7. Hibi T, Furuki I (1985) Melon necrotic spot virus. CMI/AAB Descriptions of Plant Viruses, no. 302

  8. Hillman BI, Hearne P, Rochon D, Morris TJ (1989) Organization of tomato bushy stunt virus genome: characterization of the coat protein gene and 3′ terminus. Virology 169: 42–50

    Google Scholar 

  9. Hogle JM, Maeda A, Harrison SC (1986) Structure and assembly of turnip crinkle virus. I. X-ray crystallographic structure analysis at 3.2 Å resolution. J Mol Biol 191: 625–638

    Google Scholar 

  10. Holms DS, Quigley M (1981) A rapid boiling method for the preparation of bacterial plasmids. Anal Biochem 114: 513–524

    Google Scholar 

  11. Keese P, Martin RR, Kawchuk LM, Waterhouse PM, Gerlach WL (1990) Nucleotide sequences of an Australian and a Canadian isolate of potato leafroll luteovirus and their relationships with two European isolates. J Gen Virol 71: 719–724

    Google Scholar 

  12. Kohnen PD, Dougherty WG, Hampton RO (1992) Detection of pea seedborne mosaic potyvirus by sequence specific enzymatic amplification. J Virol Methods 37: 253–258

    Google Scholar 

  13. Laemmli UK (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227: 680–685

    Google Scholar 

  14. Langeveld SA, Dore J-M, Memelink J, Derks AFLM, van der Vlugt CIM, Asjes CJ, Bol JF (1991) Identification of potyviruses using the polymerase chain reaction with degenerate primers. J Gen Virol 72: 1531–1541

    Google Scholar 

  15. Matsuo K (1993) Detection of three strains of melon necrotic spot virus by three ELISA procedures and their distribution in Japan. Ann Phytopathol Soc Japan 59: 26–32

    Google Scholar 

  16. Matsuo K, Kameya-Iwaki M, Ota T (1991) Two new strains of melon necrotic spot virus. Ann Phytopathol Soc Japan 57: 558–567

    Google Scholar 

  17. Matthews REF (1993) Overview. In: Matthews REF (ed) Diagnosis of plant virus diseases. CRC Press, Boca Raton, pp 1–14

    Google Scholar 

  18. Ohshima K, Hataya T, Sano T, Inoue AK, Shikata E (1991) Comparison of biological properties, serological characteristics and amino acid sequences of coat protein between potato virus Y ordinary strain and necrotic strain. Ann Phytopathol Soc Japan 57: 615–622

    Google Scholar 

  19. Ohshima K, Nakaya T, Matsumura T, Shikata E, Kimura I (1993) Nucleotide sequences of coat protein and 17 K protein genes for a potato leafroll virus Japanese isolate. Ann Phytopathol Soc Japan 59: 204–208

    Google Scholar 

  20. Pappu SS, Brand R, Pappu HR, Rybicki EP, Gough KH, Frenkel MJ, Niblett CL (1993) A polymerase chain reaction method adapted for selective amplification and cloning of 3′ sequences of potyviral genomes: application to dasheen mosaic virus. J Virol Methods 41: 9–20

    Google Scholar 

  21. Riviere CJ, Pot J, Tremaine JH, Rochon DM (1989) Coat protein of melon necrotic spot carmovirus is more similar to those of tombusviruses than those of carmoviruses. J Gen Virol 70: 3033–3042

    Google Scholar 

  22. Riviere CJ, Rochon DM (1990) Nucleotide sequence and genomic organization of melon necrotic spot virus. J Gen Virol 71: 1887–1896

    Google Scholar 

  23. Rosner A, Ginzburg I, Bar-Joseph M (1983) Molecular cloning of complementary DNA sequences of citrus tristeza virus RNA. J Gen Virol 64: 1757–1763

    Google Scholar 

  24. Saiki RK, Gelfand DH, Stoffel S, Scharf SJ, Higuchi R, Horn GT, Mullis KB, Erlich HA (1988) Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase. Science 230: 1350–1354

    Google Scholar 

  25. Sanger F, Nicklen S, Coulson AR (1977) DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci USA 74: 5463–5467

    Google Scholar 

  26. Shukla DD, Ward CW (1989) Structure of potyvirus coat proteins and its application in the taxonomy of the potyvirus group. Adv Virus Res 36: 273–314

    Google Scholar 

  27. Tonegusso F, Glynn S, Levi E, Mjolsness S, Hayday A (1988) Use of a chemically modified T7 DNA polymerase for manual and automated sequencing of supercoiled DNA. Biotechniques 6: 460–469

    Google Scholar 

  28. Towbin H, Staehelin T, Gordon J (1979) Electrophoretic transfer of proteins from polyacrylamide gels to nitrocellurose sheets: procedure and applications. Proc Natl Acad Sci USA 76: 4350–4354

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Ohshima, K., Matsuo, K. & Sako, N. Nucleotide sequences and expression inEscherichia coli of the coat protein genes from two strains of melon necrotic spot virus. Archives of Virology 138, 149–160 (1994). https://doi.org/10.1007/BF01310046

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF01310046

Keywords

Navigation