Abstract
DNA purified from a Chinese hamster cell line of lung fibroblast origin (DC83F) was analyzed by density gradient centrifugation and by gel electrophoresis after restriction endonuclease digestion in order to fractionate discrete repetitive fractions within the total DNA. No obvious satellite DNAs were resolved using the CsCl or Ag-Cs2SO4 density gradient conditions described herein. However, analysis of the digestion products of a battery of restriction endonucleases indicated that three of these enzymes, EcoR 1, HaeIII, and XhoI, yielded discrete fragments which could be visualized with EtBr staining or identified by scintillation counting of [3H] DNA. DNAs from several highly (≥ hundredfold increased resistance) antifolate-resistant sublines of DC-3F, characterized by a large homogeneously staining region (HSR) in the chromosome complement, were examined with both techniques and compared to the parental, antifolate-sensitive cell line DNA. The density gradient profiles and electrophoretic patterns of restriction endonuclease digests were identical among all the cell lines examined and were indistinguishable from those of the parental DC-3F DNA.
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Alt, F. W., Kellems, R. E., Bertino, J. R., and Schimke, R. T. (1978). Selective multiplication of dihydrofolate reductase genes in methotrexate-resistant variants of cultured murine cells. J. Biol. Chem. 2531357.
Arrighi, F. E., Mandel, M., Bergendahl, J., and Hsu, T. C. (1970). Buoyant densities of DNA of mammals. Biochem. Genet. 4367.
Benz, R. D., and Burki, H. J. (1978). The distribution of moderately repeated DNA sequences among Chinese hamster chromosomes. Exp. Cel Res. 112155.
Biedler, J. L., and Spengler, B. A. (1976a). Metaphase chromosome anomaly: Association with drug resistance and cell-specific products. Science 191185.
Biedler, J. L., and Spengler, B. A. (1976b). Quantitative relationship between a chromosome abnormality (HSR) and antifolate resistance associated with enzyme overproduction. J. Cell Biol. 70:117a.
Biedler, J. L., Albrecht, A. M., Hutchison, D. J., and Spengler, B. A. (1972). Drug response, dihydrofolate reductase, and cytogenetics of amethopterin-resistant Chinese hamster cells in vitro. Cancer Res. 32153.
Biedler, J. L., Albrecht, A. M., and Spengler, B. A. (1978). Biochemical and karyological properties of cells resistant to the quinazoline antifolate, methasquin, Eur. J. Cancer 1441.
Biedler, J. L., Melera, P. W., and Spengler, B. A. (1980). Specifically altered metaphase chromosomes in antifolate-resistant Chinese hamster cells that overproduce dihydrofolate reductase. Cancer Genet. and Cytogenet. 247.
Bostock, C. J., Gosden, J. R., and Mitchell, A. R. (1978). Localization of a male-specific DNA fragment to a sub-region of the human Y chromosome. Nature 272324.
Brown, D. D., and Dawid, I. B. (1968). Specific gene amplification in oocytes. Science 160272.
Cooke, H. (1976). Repeated sequences specific to human males. Nature 262182.
Corneo, G., Ginelli, E., and Polli, E. (1967). A satellite DNA isolated from human tissues. J. Mol. Biol. 23619.
Corneo, G., Ginelli, E., and Polli, E. (1968). Isolation of the complementary strands of a human satellite DNA. J. Mol. Biol. 33331.
Cortadas, J., Macaya, G., and Bernardi, G. (1977). An analysis of the bovine genome by density gradient centrifugation: Fractionation in Cs2SO4/3,6-bis(acetatomercurimethyl)dioxane density gradient. Eur. J. Biochem. 7613.
Deaven, L. L., and Peterson, D. F. (1973). The chromosomes of CHO, an aneuploid Chinese hamster cell line: G-band, C-band, and autoradiographic analyses. Chromosoma (Berlin) 41129.
Filipski, J., Thiery, J.-P., and Bernardi, G. (1973). An analysis of the bovine genome by Cs2SO4-Ag+ density gradient centrifugation. J. Mol. Biol. 80177.
Gall, J. G. (1968). Differential synthesis of the genes for ribosomal RNA during amphibian oogenesis. Proc. Natl. Acad. Sci. 60553.
Gosden, J. R., Mitchell, A. R., Buckland, R. A., Clayton, R. P., and Evans, H. J. (1975). The location of four human satellite DNAs on human chromosomes. Exp. Cell Res. 92148.
Hsu, T. C., and Arrighi, F. E. (1971). Distribution of constitutive heterochromatin in mammalian chromosomes. Chromosoma (Berlin) 34243.
Jensen, R. H., and Davidson, N. (1966). Spectrophotometric, potentiometric, and density gradient ultracentrifugation studies of the binding of silver ion by DNA. Biopolymers 417.
Jones, K. W., and Corneo, G. (1971). Location of satellite and homogeneous DNA sequences on human chromosomes. Nature New Biol. 233268.
Jones, K. W., Prosser, J., Corneo, G., and Ginelli, E. (1973). The chromosomal location of human satellite DNA III. Chromosoma (Berlin) 42445.
Kit, S. (1961). Equilibrium sedimentation in density gradients of DNA preparations from animal tissues. J. Mol. Biol. 3711.
Loveday, K. S., and Latt, S. A. (1978). Search for DNA interchange corresponding to sister chromatid exchanges in Chinese hamster ovary cells. Nucleic Acids Res. 54087.
Manuelidis, L. (1976). Repeating restriction fragments of human DNA. Nucleic Acids Res. 33063.
Manuelidis, L. (1977). A simplified method for the preparation of mouse satellite DNA. Anal. Biochem. 78561.
Manuelidis, L. (1978a). Complex and simple sequences in human repeated DNAs. Chromosoma (Berlin) 661.
Manuelidis, L. (1978b). Chromosomal localization of complex and simple repeated human DNAs. Chromosoma (Berlin) 6623.
Melera, P. W., Wolgemuth, D. J., Hession, C., and Biedler, J. L. (1980). Antifolate resistant Chinese hamster cells: Evidence for the overproduction of two dihydrofolate reductases encoded by separate mRNAs. J. Biol. Chem. 255319.
Miller, O. J., Tantravahi, R., Miller, D. A., Yu, L.-C., Szabo, P., and Prensky, W. (1979). Marked increase in ribosomal RNA gene multiplicity in a rat hepatoma cell line. Chromosoma (Berlin) 71183.
Moar, M. H., and Natarajan, A. T. (1977). Chromosomal locations of satellite DNA in MSWBS ascites tumor cell lines. J. Natl. Cancer Inst. 581151.
Nunberg, J. H., Kaufman, R. J., Schimke, R. T., Urlaub, G., and Chasin, L. A. (1978). Amplified dihydrofolate reductase genes are localized to a homogeneously staining region of a single chromosome in a methotrexate-resistant Chinese hamster ovary cell line. Proc. Natl. Acad. Sci. 755553.
Nunberg, J. H., Kaufman, R. J., Chang, A. C. Y., Erlich, H. A., Cohen, S. N., and Schimke, R. T. (1979). Structure of dihydrofolate reductase genes in methotrexate-resistant mouse lines: Expression of mouse dihydrofolate reductase in E. coli. J. Supramol. Struct. Suppl. 369.
Parker, D. L., Rothblum, L. I., and Busch, H. (1978). A 3.6 megadalton EcoR 1 restriction fragment found in abundance in the genome of the Novikoff hepatoma and in few copies in the normal rat liver. J. Cell Biol. 79:137a.
Rinehart, F. P., and Schmid, C. W. (1976). The effect of silver ion binding and pH on the buoyant density of DNA and its use in fractionating heterogeneous DNA. Biochim. Biophys. Acta 425451.
Saunders, G. F., Hsu, T. C., Getz, M. J., Simes, E. L., and Arrighi, F. E. (1972). Locations of a human satellite DNA in human chromosomes. Nature New Biol. 236244.
Schildkraut, C. L., and Maio, J. J. (1969). Fractions of the HeLa DNA differing in their content of guanine + cytosine. J. Mol. Biol. 46305.
Schimke, R. T., Alt, F. W., Kellems, R. E., Kaufman, R. J., and Bertino, J. R. (1977). Amplification of bihydrofolate reductase genes in methotrexateresistant cultured mouse cells. C.S.H.S.Q.B. 42649.
Schimke, R. T., Brown, P., Kaufman, R., Nunberg, J., and Setzer, D. (1979). Gene amplification and methotrexate resistance in cultured mammalian cells. J. Supramol. Struct. Suppl. 341.
Skinner, D. (1977). Satellite DNA's. Bioscience 27790.
Tapiero, H., Canera, R., and Schildkraut, C. L. (1972). Fractions of Chinese hamster DNA differing in their content of guanine + cytosine and evidence for the presence of single-stranded DNA. Biochim. Biophys. Acts 272350.
Thiery, J.-P., Macaya, G., and Bernardi, G. (1976). An analysis of eukaryotic genomes by density gradient centrifugation. J. Mol. Biol. 108219.
Votavova, H., and Sponar, J. (1975). Identification and separation of components of calf thymus DNA using a CsCl-netropsin density gradient. Nucleic Acids Res. 2431.
Weinstock, R., Sweet, R., Weiss, M., Cedar, H., and Axel, R. (1978). Intragenic DNA spacers interrupt the ovalbumin gene. Proc. Natl. Acad. Sci. 751299.
Yunis, J. J., Kuo, M. T., and Saunders, G. F. (1977). Localization of sequences specifying messenger RNA to light-staining G-bands of human chromosomes. Chromosoma (Berlin) 61335.
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This work was supported in part by grants to the Sloan-Kettering Institute and to J.L.B. and P.W.M. by the National Institutes of Health and the Fairchild New Frontiers Fund. Portions of this study were presented at the 18th Annual Meeting of the American Society for Cell Biology held in San Antonio, Texas, November 4–8, 1978.
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Wolgemuth, D.J., Biedler, J.L. & Melera, P.W. Repetitive DNA sequences in methotrexate- and methasquin-sensitive and -resistant Chinese hamster cell lines. Biochem Genet 18, 655–667 (1980). https://doi.org/10.1007/BF00484583
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DOI: https://doi.org/10.1007/BF00484583