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Asymmetric repair of bacteriophage T7 heteroduplex DNA

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Summary

Heteroduplex DNA molecules were prepared in vitro using one strand of DNA carrying a point mutation and one strand of the corresponding wild-type DNA. The heteroduplex DNA was transfected into competent bacteria and the progeny genotypes in the resulting infective centers were determined. From the results were conclude that about 80% of all transfected DNA molecules are repaired before DNA replication starts. This fraction of repaired DNA is independent of the location of the mismatched nucleotide pair. However, mismatch correction occurs preferentially on the H strand of the heteroduplex DNA.

The repair does not depend on a known phage coded function but requires the active bacterial genes mut U, mut H, mut S and probably mut L.

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References

  • Auer B, Günthert U, Wagner EF, Schweiger M (1979) Is the DNA of virus T7 methylated? J Gen Virol 44:609–613

    Google Scholar 

  • Baas PD, Jansz HS (1972) Asymmetric information transfer during ϕX174 DNA replication. J Mol Biol 63:557–568

    Google Scholar 

  • Benzinger R (1978) Transfection of Enterobacteriaccac and its applications. Microbiol Reviews 42:194–236

    Google Scholar 

  • Benzinger R, Enquist LW, Skalka A (1975) Transfection of Escherichia coli spheroplasts. V. Activity of rec BC nuclease in rec+ and rec- spheroplasts measured with different forms of bacteriophage DNA. J Virol 15:861–871

    Google Scholar 

  • Bolivar F, Rodriguez RL, Betlach MC, Boyer HW (1977) Construction and characterization of new cloning vehicles. I. Ampicillin-resistant derivatives of the plasmid pMB 9. Gene 2, 75–93

    Google Scholar 

  • Broker RR, Lehman IR (1971) Branched DNA molecules: intermediates in T4 recombination. J Mol Biol 60:131–149

    Google Scholar 

  • Campbell A (1961) Sensitive mutants of bacteriophage λ. Virology 14:22–32

    Google Scholar 

  • Capaldo FN, Ramsey G, Barbour SD (1974) Analysis of the growth of recombination-deficient strains of Escherichia coli K-12. J Bacteriol 118:242–249

    Google Scholar 

  • Center MS, Studier FW, Richardson CC (1970) The structural gene for a T7 endonuclease essential for phage DNA synthesis. Proc Natl Acad Sci USA 65:242–249

    Google Scholar 

  • Chamberlin M, McGrath J, Waskell L (1970) New RNA polymerase from Escherichia coli infected with bacteriophage T7. Nature 228:227–231

    Google Scholar 

  • Cox EC (1976) Bacterial mutator genes and the control of spontaneous mutation. Annu Rev Gent 10:135–156

    Google Scholar 

  • Doerfler W, Hogness DS (1968) Gene orientation in bacteriophage lambda as determined from the genetic activities of heteroduplex DNA formed in vitro. J Mol Biol 33:661–678

    Google Scholar 

  • Dreiseikelmann B, Eichenlaub R, Wackernagel W (1979) The effect of differential methylation by Escherichia coli of plasmid DNA and phage T7 DNA on the cleavage by restriction nuclease MboI from Moraxella bovis. Biophys Acta 562:418–428

    Google Scholar 

  • Fraser D, Jerrel EA (1953) The amino acid composition of T3 bacteriophage. J Biol Chem 205:291–295

    Google Scholar 

  • Glickman BW, Radman M (1980) Escherichia coli mutator mutants deficient in methylation-instructed DNA mismatch correction. Proc Natl Acad Sci USA 77:1063–1067

    Google Scholar 

  • Glickman BW, van den Elsen P, Radman M (1978) Induced mutagenesis in dam- mutants of Escherichia coli: A role for 6-methyladenine residues in mutation avoidance. Mol Gen Genet 163:307–312

    Google Scholar 

  • Goldmark PJ, Linn S (1972) Purification and properties of the rec BC DNase of E. coli K-12. J Biol Chem. 247:1849–1860

    Google Scholar 

  • Grippo P, Richardson CC (1971) Deoxyribonucleic acid polymerase of bacteriophage T7. J Biol Chem 246:6867–6873

    Google Scholar 

  • Guthrie GD, Sinsheimer RL (1963) Observations on the infection of bacterial protoplasts with the deoxyribonucleic acid of bacteriophage λX174. Biochim Biophys Acta 72:290–297

    Google Scholar 

  • Hausmann R (1976) Bacteriophage T7 genetics. Curr Top Microbiol Immunol 75:77–110

    Google Scholar 

  • Holliday R (1974) Molecular aspects of genetic exchange and gene conversion. Genetics 78:273–287

    Google Scholar 

  • Howard-Flanders P, Boyce RP, Theriot L (1966) Three loci in E. coli K12 that control the excision of pyrimidine dimers and certain other mutagen products from DNA. Genetics 53:1119–1136

    Google Scholar 

  • Kerr C, Sadowski PD (1972) Gene 6 exonuclease of bacteriophage T7. I. Purification and properties of the enzyme. J Biol Chem 247:305–310

    Google Scholar 

  • Kerr C, Sadowski PD (1975) The involvement of genes 3, 4, 5, and 6 in genetic recombination in bacteriophage T7. Virology 65:281–285

    Google Scholar 

  • Klinkert J, Klein A (1978) Roles of bacteriophage λ gene products O and P during early and late phages of infection cycle. Virology 25:730–737

    Google Scholar 

  • Kolodner R, Masamune Y, LeClere JE, Richardson CC (1978) Gene 4 protein of bacteriophage T7. Purification, physical properties, and stimulation of T7 DNA polymerase during the elongation of polynucleotide chains. J Biol Chem 253:566–573

    Google Scholar 

  • Liberfarb RM, Bryson V (1970) Isolation, characterisation, and genetic analysis of mutator genes in Escherichia coli B and K12. J Bacteriol 104:363–375

    Google Scholar 

  • Mandel M, Higa A (1970) Calcium-dependent bacteriophage DNA infection. J Mol Biol 53:159–162

    Google Scholar 

  • Marinus MG (1973) Location of DNA methylation genes on the Escherichia coli map. Mol Gen Genet 127:47–55

    Google Scholar 

  • Marinus MG, Morris NR (1975) Pleiotropic effects of a DNA adenine methylation mutation (dam-3) in Escherichia coli K12. Mutat Res 28:15–26

    Google Scholar 

  • Meselson MS, Radding CM (1975) A general model for genetic recombination. Proc Natl Acad Sci USA 72:358–361

    Google Scholar 

  • Millette RL, Trotter CD, Herrlich P, Schweiger M (1970) In vitro synthesis, termination, and release of active messenger DNA. Cold Spring Harbor Symp Quant Biol 35:135–142

    Google Scholar 

  • Modrich P, Richardson CC (1975) Bacteriophage T7 deoxyribonucleic acid replication in vitro. Bacteriophage T7 DNA polymerase: An enzym composed of phage-and host-specified subunits. J Biol Chem 250:5515–5522

    Google Scholar 

  • Nevers P, Spatz HC (1975) Escherichia coli mutants uvr D and uvr E deficient in gene conversion of λ-heteroduplexes. Mol Gen Genet 139:233–243

    Google Scholar 

  • Nikolskaya II, Tkatcheva ZG, Vanyushin BF, Tikchonenko TI (1968) On the presence of minor bases in DNA of phages DD7 and SD and their hosts. Biochim Biophys Acta 155:626–669

    Google Scholar 

  • Oey JL, Strätling W, Knippers R (1971) A DNA polymerase induced by bacteriophage T7. Eur J Biochem 23:497–504

    Google Scholar 

  • Ogawa H, Araki H, Tsujimoto Y (1979) Recombination intermediates formed in the extract from T7-infected cells. Cold Spring Harbor Symp Quant Biol 43:1033–1041

    Google Scholar 

  • Powling A, Knippers R (1976) Recombination of bacteriophage T7 in vivo. Mol Gen Genet 149:63–71

    Google Scholar 

  • Powling A, Knippers R (1974) Some functions involved in bacteriophage T7 genetic recombination. Mol Gen Genet 134:173–180

    Google Scholar 

  • Radding CM (1978) Genetic recombination: Strand transfer and mismatch repair. Annu Rev Biochem 47:847–880

    Google Scholar 

  • Radman M, Villani G, Boiteux S, Kinsella AR, Glickman BW, Spadari S (1979) Replicational fidelity: Mechanisms of mutation avoidance and mutation fixation. Cold Spring Harbor Symp Quant Biol 43:937–946

    Google Scholar 

  • Richardson CC, Romano LJ, Kolodner R, LeClerc JE, Tamanoi F, Engler MJ, Dean FB, Richardson DS (1979) Replication of bacteriophage T7 DNA by purified proteins. Cold Spring Harbor Symp Quant Biol 43:427–440

    Google Scholar 

  • Roeder GS, Sadowski PD (1979) Pathways of recombination of bacteriophage T7 DNA in vitro. Cold Spring Harbor Symp Quant Biol 43:1023–1032

    Google Scholar 

  • Rydberg B (1978) Bromuracil mutagenesis and mismatch repair in mutator strains of Escherichia coli. Mutat Res 52:11–24

    Google Scholar 

  • Sadowski PD (1971) Bacteriophage T7 endonuclease I. Properties of the enzyme purified from T7 phage-infected Escherichia coli B. J Biol Chem 246:209–216

    Google Scholar 

  • Scherzinger E, Lanka E, Hillenbrand G (1977) Role of bacteriophage T7 DNA primase in the initiation of DNA strand synthesis. Nucleic Acids Res 4:4151–4163

    Google Scholar 

  • Seroka K, Wackernagel W (1977) In vivo effects of rec BC DNase, exonuclease I, and DNA polymerases of Escherichia coli on the infectivity of native and single-stranded DNA of bacteriophage T7. J Virol 21:906–912

    Google Scholar 

  • Spatz HC, Trautner TA (1970) One way to do experiments on gene conversion? Mol Gen Gen 109:84–106

    Google Scholar 

  • Studier FW (1969) The genetics and physiology of bacteriophage T7. Virology 39:562–574

    Google Scholar 

  • Studier FW, Hausmann R (1969) Integration of two sets of T7 mutants. Virology 39:587–588

    Google Scholar 

  • Szybalski W, Kubinski H, Hradecna Z, Summers WC (1971) Analytical and preparative separation of the complementary DNA strands. In: Grossman L, Moldave K (eds) Methods in Enzymology XXI. Academic Press, New York London, pp 383–413

    Google Scholar 

  • Tsujimoto Y, Ogawa H (1977) Intermediates in genetic recombination of bacteriophage T7 DNA. J Mol Biol 109:423–436

    Google Scholar 

  • Wagner R, Meselson M (1976) Repair tracts in mischatched DNA heteroduplexes. Proc Natl Acad Sci USA 73:4135–4139

    Google Scholar 

  • Wechsler J, Gross JD (1971) Escherichia coli mutants temperaturesensitive for DNA synthesis. Mol Gen Genet 113:273–284

    Google Scholar 

  • Wolfson JD, Dressler D, Magazin M (1972) Bacteriophage T7 DNA replication: A linear replicating intermediate. Proc Natl Acad Sci USA 69:499–504

    Google Scholar 

  • Yamamoto KR, Alberts BM, Benzinger R, Lawhorne L, Treiber G (1970) Rapid bacteriophage sedimentation in the presence of polyethylene glycol and its application to large-scale virus purification. Virology 40:734–744

    Google Scholar 

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Communicated by H. Saedler

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Bauer, J., Krämmer, G. & Knippers, R. Asymmetric repair of bacteriophage T7 heteroduplex DNA. Molec. Gen. Genet. 181, 541–547 (1981). https://doi.org/10.1007/BF00428750

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  • DOI: https://doi.org/10.1007/BF00428750

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