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Determination of heteronuclear three-bond J-coupling constants in peptides by a simple heteronuclear relayed E.COSY experiment

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Summary

A simple heteronuclear relayed E.COSY pulse sequence with a minimum number of pulses is proposed for the quantitative determination of heteronuclear three-bond J-coupling constants in uniformly 13C-enriched polypeptide samples. Numerous heteronuclear three-bond coupling constants, including \({}^3{\text{J}}_{{\text{H}}^{\text{N}} {\text{C}}'} \), \({}^3{\text{J}}_{{\text{H}}^{\text{N}} {\text{C}}^\beta } \), \({}^3{\text{J}}_{{\text{H}}^\beta {\text{C}}'} \), and \({}^3{\text{J}}_{{\text{H}}^\alpha {\text{C}}^\gamma } \), can be determined for each residue from a single heteronuclear relayed E.COSY spectrum. Couplings relevant for stereospecific assignments as well as for the determination of dihedral angles in the amino acid backbone and in side chains are obtained. The method is demonstrated on the uniformly 13C-enriched decapeptide antamanide (-Val1-Pro2-Pro3-Ala4-Phe5-Phe6-Pro7-Pro8-Phe9-Phe10-).

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References

  • BlackledgeM.J., BrüschweilerR., GriesingerC., SchmidtJ.M., XuP. and ErnstR.R. (1993) Biochemistry, 32, 10960–10974.

    Google Scholar 

  • BodenhausenG. and RubenD.J. (1980) Chem. Phys. Lett., 69, 185–189.

    Google Scholar 

  • BrüschweilerR., BlackledgeM. and ErnstR.R. (1991) J. Biomol. NMR, 1, 3–11.

    Google Scholar 

  • BystrovV.F. (1976) Prog. NMR Spectrosc., 10, 41–81.

    Google Scholar 

  • CliffordA.A. (1973) Multivariate Error Analysis, Applied Science Publishers Ltd., London.

    Google Scholar 

  • CloreG.M., BaxA., WingfieldP.T. and GronenbornA. (1988) FEBS Lett., 238, 17–21.

    Google Scholar 

  • DelaglioF., TorchiaD.A. and BaxA. (1991) J. Biomol. NMR, 1, 439–446.

    Google Scholar 

  • EdisonA.S., WestlerW.M. and MarkleyJ.L. (1991) J. Magn. Reson., 92, 434–438.

    Google Scholar 

  • EggenbergerU., Karimi-NejadY., ThüringH., RüterjansH. and GriesingerC. (1992) J. Biomol. NMR, 2, 583–590.

    Google Scholar 

  • EichG.W., BodenhausenG. and ErnstR.R. (1982) J. Am. Chem. Soc., 104, 3731–3732.

    Google Scholar 

  • EmersonS.D. and MontelioneG.T. (1992a) J. Am. Chem. Soc., 114, 354–356.

    Google Scholar 

  • EmersonS.D. and MontelioneG.T. (1992b) J. Magn. Reson., 99, 413–420.

    Google Scholar 

  • ErnstR.R., BlackledgeM., BoentgesS., BriandJ., BrüschweilerR., ErnstM., GriesingerC., MádiZ.L., Schulte-HerbrüggenT. and SørensenO.W. (1991) In Proteins: Structure, Dynamics and Design (Eds, RenugopalakrishnanV., CareyP.R., SmithI.C.P., HuangS.G. and StorerA.C.) ESCOM, Leiden, pp. 11–28.

    Google Scholar 

  • FishmanA.J., LiveD.H., WyssbrodH.R., AgostaW.C. and CowburnD. (1979) J. Am. Chem. Soc., 102, 2533–2539.

    Google Scholar 

  • FreyM.H., WagnerG., VasakM., SørensenO.W., NeuhausD., WörgötterE., KägiJ.H.R., ErnstR.R. and WüthrichK. (1985) J. Am. Chem. Soc., 107, 6847–6851.

    Google Scholar 

  • GemmeckerG. and FesikW. (1991) J. Magn. Reson., 95, 208–213.

    Google Scholar 

  • GörlachM., WittekindM., FarmerIIB.T., KayL.E. and MuellerL. (1993) J. Magn. Reson. Ser. B, 101, 194–197.

    Google Scholar 

  • GriesingerC., SørensenO.W. and ErnstR.R. (1985) J. Am. Chem. Soc., 107, 6394–6396.

    Google Scholar 

  • GriesingerC., SørensenO.W. and ErnstR.R. (1986) J. Chem. Phys., 85, 6837–6852.

    Google Scholar 

  • GriesingerC., SørensenO.W. and ErnstR.R. (1987) J. Magn. Reson., 75, 474–492.

    Google Scholar 

  • GriesingerC. and EggenbergerU. (1992) J. Magn. Reson., 97, 426–434.

    Google Scholar 

  • GronenbornA., BaxA., WingfieldP.T. and CloreG.M. (1989) FEBS Lett., 243, 93–98.

    Google Scholar 

  • JaninJ., WodakS., LevittM.H. and MaigretB. (1978) J. Mol. Biol., 125, 357–386.

    Google Scholar 

  • Karimi-NejadY., SchmidtJ.M., RüterjansH., SchwalbeH. and GriesingerC. (1994) Biochemistry, 33, 5481–5492.

    Google Scholar 

  • KarleI.L., WielandT., SchermerD. and OttenheymH.C.J. (1979) Proc. Natl. Acad. Sci. USA, 76, 1532–1536.

    Google Scholar 

  • KarplusM. (1959) J. Chem. Phys., 30, 11–15.

    Google Scholar 

  • KarplusM. (1963) J. Am. Chem. Soc., 85, 2870–2871.

    Google Scholar 

  • KesslerH., GriesingerC. and WagnerK. (1987) J. Am. Chem. Soc., 109, 6927–6933.

    Google Scholar 

  • KesslerH., GriesingerC., LautzJ., MüllerA., VanGunsterenW.F. and BerendsenH.J.C. (1988) J. Am. Chem. Soc., 110, 3393–3396.

    Google Scholar 

  • Kessler H., Müller A. and Pook K.-H. (1989a) Liebigs Ann. Chem., 903–912.

  • Kessler, H., Bats, J.W., Lautz, J. and Müller, A. (1989b) Liebigs Ann. Chem., 913–928.

  • LernerL. and BaxA. (1986) J. Magn. Reson., 69, 375–380.

    Google Scholar 

  • MádiZ.L., GriesingerC. and ErnstR.R. (1990) J. Am. Chem. Soc., 112, 2908–2914.

    Google Scholar 

  • MadsenJ.C., SørensenO.W., SørensenP. and PoulsenF.M. (1993) J. Biomol. NMR, 3, 239–244.

    Google Scholar 

  • MarionD. and BaxA. (1988) J. Magn. Reson., 79, 352–356.

    Google Scholar 

  • MitchellA.R., KentS.B.H., EngelhardM. and MerrifieldR.B. (1978) J. Org. Chem., 43, 2845–2852.

    Google Scholar 

  • MontelioneG.T. and WagnerG. (1989) J. Am. Chem. Soc., 111, 5474–5475.

    Google Scholar 

  • MontelioneG.T., WinklerM.E., RauenbühlerP. and WagnerG. (1989) J. Magn. Reson., 82, 198–204.

    Google Scholar 

  • MontelioneG.T., EmersonS.D. and LyonsB.A. (1992) Biopolymers, 32, 327–334.

    Google Scholar 

  • OlsenH.B., LudvigsenS. and SørensenO.W. (1993a) J. Magn. Reson. Ser. A, 104, 226–230.

    Google Scholar 

  • OlsenH.B., LudvigsenS. and SørensenO.W. (1993b) J. Magn. Reson. Ser. A, 105, 321–322.

    Google Scholar 

  • OttingG., WidmerH., WagnerG. and WüthrichK. (1986) J. Magn. Reson., 66, 187–193.

    Google Scholar 

  • PelczerI., BishopK.D., LevyG.C. and BorerP.N. (1991) J. Magn. Reson., 91, 604–606.

    Google Scholar 

  • PonderJ.W. and RichardsF.M. (1987) J. Mol. Biol. 193, 775–791.

    Google Scholar 

  • SchmidtJ.M., SørensenO.W. and ErnstR.R. (1994) J. Magn. Reson. Ser. A, 109, 80–89.

    Google Scholar 

  • SchmiederP., KurzM. and KesslerH. (1991) J. Biomol. NMR, 1, 403–420.

    Google Scholar 

  • SeipS., BalbachJ. and KesslerH. (1992) J. Magn. Reson., 100, 406–410.

    Google Scholar 

  • SeipS., BalbachJ. and KesslerH. (1994) J. Magn. Reson. Ser. B, 104, 172–179.

    Google Scholar 

  • SørensenO.W. (1990) J. Magn. Reson., 90, 433–438.

    Google Scholar 

  • TitmanJ.J., NeuhausD. and KeelerJ. (1989) J. Magn. Reson., 85, 111–131.

    Google Scholar 

  • VuisterG.W. and BaxA. (1992) J. Biomol. NMR, 2, 401–405.

    Google Scholar 

  • WagnerG., SchmiederP. and ThanabalV. (1991) J. Magn. Reson., 93, 436–440.

    Google Scholar 

  • WasylishenR. and SchaeferT. (1972) Can. J. Chem., 50, 2710–2712.

    Google Scholar 

  • WeisemannR., LöhrF. and RüterjansH. (1994a) J. Biomol. NMR, 4, 587–593.

    Google Scholar 

  • WeisemannR., RüterjansH., SchwalbeH., SchleucherJ., BermelW. and GriesingerC. (1994b) J. Biomol. NMR, 4, 231–240.

    Google Scholar 

  • WiderG., NeriD., OttingG. and WüthrichK. (1989) J. Magn. Reson., 85, 426–431.

    Google Scholar 

  • WüthrichK. (1986) NMR of Proteins and Nucleic Acids, Wiley, New York, NY.

    Google Scholar 

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Schmidt, J.M., Ernst, R.R., Aimoto, S. et al. Determination of heteronuclear three-bond J-coupling constants in peptides by a simple heteronuclear relayed E.COSY experiment. J Biomol NMR 6, 95–105 (1995). https://doi.org/10.1007/BF00417495

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