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Human cellular sequences detectable with adenovirus probes

I. Evidence for novel repeat sequences and a possible E1a-like cellular “gene”

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Abstract

Previous studies suggesting homology between human cellular DNA and the DNAs from adenovirus types 2 and 5 are extended in the present paper. A clone (ChAdh), isolated from a human genomic DNA library using an adenovirus probe, hybridized to discrete regions of adenovirus 2 DNA, including part of the transforming genes E1a and E1b, as well as to repeated sequences within human DNA. The E1a and E1b genes both hybridize to the same 300 base pair Sau3AI fragment within ChAdh although there is no obvious homology between E1a and E1b. The Ad 2 E1a gene was also used as a probe to screen other cellular DNAs to determine whether repeated sequences detectable with Ad 2 DNA probes were conserved over long evolutionary periods. Hybridization was detected to the genomes of man, rat, mouse and fruit fly, but not to those of yeast and bacteria. In addition to a “smear” hybridization, discrete fragments were detected in both rodent and fruit fly DNAs. The experiments reported suggest the existence of two different types of cellular sequences detected by Ad 2 DNA: (1) repeated sequences conserved in a variety of eukaryote genomes and (2) a possible unique sequence detected with an E1a probe different from that responsible for hybridization to repeated sequences. This unique sequence was detected as an EcoRI fragment in mouse DNA and had a molecular size of about 8.8 kb.

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References

  • Aleström P, Stenlund A, Li P, Bellett A, Petterson U (1982) Sequence homology between avian and human adenoviruses. J Virol 42:306–310

    Google Scholar 

  • Arrand JR, Walsh-Arrand JE, Rymo L (1983) Cytoplasmic RNA from normal and malignant human cells shows homology to the DNAs of Epstein-Barr virus and human adenovirus. EMBO J 2:1673–1683

    Google Scholar 

  • Bellett AJD, Li P, David ET, Mackey EJ, Braithwaite AW, Cutt JR (1985) Control functions of adenovirus transformation region E1A gene products in rat and human cells. Mol Cell Biol 5:1933–1939

    Google Scholar 

  • Betlach MC, Hershfield V, Chow L, Brown W, Goodman HM, Boyer HW (1976) A restriction endonuclease analysis of bacterial plasmid controlling the EcoRI restriction and modification of DNA. Fed Proc 35:2037–2043

    Google Scholar 

  • Braithwaite AW, Murray JD, Bellett AJD (1981) Alterations to controls of cellular DNA synthesis by adenovirus infection. J Virol 39:331–340

    Google Scholar 

  • Braithwaite AW, Cheetham BF, Li P, Parish CR, Waldron-Stevens LK, Bellett AJD (1983) Adenovirus-induced alterations of the cell growth cycle: a requirement for expression of E1a but not of Elb. J Virol 45:192–199

    Google Scholar 

  • Braithwaite AW, Le Jeune S, Naora H (1984) Adenoviruses have homology with a reiterated sequence in genomic DNA. DNA 3:223–230

    Google Scholar 

  • Braithwaite AW (1986) Semipermissive replication of adenovirus 5 in rat brain cells and evidence for an induction of cellular DNA replication in vivo. J Gen Virol 67:391–396

    Google Scholar 

  • Deininger PL, Jolly DJ, Rubin CM, Friedmann T, Schmid CW (1981) Base sequence studies of 300 nucleotide renatured repeated human DNA clones. J Mol Biol 151:17–33

    Google Scholar 

  • Digiovanni L, Haynes SR, Misra R, Jelinek WR (1983) Kpn I family of long-dispersed repeated DNA sequences of man: evidence for entry into genomic DNA of DNA copies of poly(CA)-terminated Kpn I RNAs. Proc Natl Acad Sci USA 80:6533–6537

    Google Scholar 

  • Frolova EI, Georgiev GP (1979) The existence of sequence homologies to adenovirus 5 DNA in the genome of normal rat cells. Nucleic Acids Res 7:1419–1428

    Google Scholar 

  • Garon CF, Berry K, Hierholzer JC, Rose J (1973) Mapping of base sequence heterologies between genomes from different adenovirus serotypes. Virology 54:414–426

    Google Scholar 

  • Green M (1970) Oncogenic viruses. Annu Rev Biochem 39:701–756

    Google Scholar 

  • Jones KW, Kinross J, Maitland N, Norval M (1979) Normal human tissues contain RNA and antigens related to human infectious adenovirus type 2. Nature 277:274–279

    Google Scholar 

  • Kao H-T, Capasso O, Heintz N, Nevins JR (1985) Cell cycle control of the human HSP70 gene: implications for the role of a cellular E1a-like function. Mol Cell Biol 5:628–633

    Google Scholar 

  • Laver WG, Younghusband HB, Wrigley NG (1971) Purification and properties of chicken embryo lethan orphan virus (an avian adenovirus). Virology 45:598–614

    Google Scholar 

  • Maniatis T, Hardison RC, Lacy E, Lauer J, O'Connell C, Quon D, Sim GK, Efstratiadis A (1978) The isolation of structural genes from libraries of eucaryotic DNA. Cell 15:687–701

    Google Scholar 

  • Manuelidis L (1982) Nucleotide sequence definition of a major human repeated DNA, the Hind III 1.9kb family. Nucleic Acids Res 10:3211–3219

    Google Scholar 

  • Nevins JR (1981) Mechanism of activation of early viral transcription by adenovirus E1a product. Cell 26:213–220

    Google Scholar 

  • Norrby E, Bartha A, Boulanger P, Dreizin RS, Ginsberg HS, Kalter SS, Kawamura H, Rowe WP, Russell WC, Schlesinger RW, Wigand R (1976) Adenoviridae. Intervirology 7:117–125

    Google Scholar 

  • Peden K, Mounts P, Hayward GS (1982) Homology between mammalian cell DNA sequences and human herpes virus genomes detected by a hybridization procedure with high-complexity probe. Cell 31:71–80

    Google Scholar 

  • Sambrook J, Botchan M, Gallimore P, Ozanne B, Petterson U, Williams J, Sharp PA (1974) Viral DNA sequences in cells transformed by Simian Virus 40, Adenovirus type 2 and Adenovirus type 5. Cold Spring Harbor Symp Quant Biol 39:615–632

    Google Scholar 

  • Sambrook J, Greene R, Stringer J, Mitchison T, Hu S-L, Botchan M (1979) Analysis of the sites of integration of viral DNA sequences in rat cells transformed by Adenovirus 2 or SV40. Cold Spring Harbor Symp Quant Biol 44:569–584

    Google Scholar 

  • Schmid CW, Jelinek WR (1982) The Alu family of dispersed repetitive sequences. Science 216:1065–1070

    Google Scholar 

  • Shimizu Yu, Yoshida K, Ren C-S, Fujinaga K, Rajagopalan S, Chinnandurai G (1983) Hinf family: a novel repeated DNA family of the human genome. Nature 302:587–590

    Google Scholar 

  • Singh L, Purdom F, Jones KW (1980) Conserved sex-chromosomeassociated nucleotide sequences in Eukaryotes. Cold Spring Harbor Symp Quant Biol 45:805–814

    Google Scholar 

  • Sun L, Paulson KE, Schmid CW, Kadyk L, Leinwand L (1984) Non-alu family interspersed repeats in human DNA and their transcriptional activity. Nucleic Acids Res 12:2669–2690

    Google Scholar 

  • Southern EM (1975) Detection of specific sequences among DNA fragments separated by gel electrophoresis. J Mol Biol 98:503–517

    Google Scholar 

  • Stabel S, Doerfler W (1982) Nucleotide sequence at the site of junction between adenovirus type 12 DNA and repetitive hamster cell DNA in transformed cell line CLACl. Nucleic Acids Res 10:8007–8203

    Google Scholar 

  • Tooze J (ed) (1981) Molecular biology of tumor viruses, DNA tumor viruses, 2nd edition, Part 2, revised. Cold Spring Harbor Laboratory Press NY

    Google Scholar 

  • Weiss RB, Mineura K, Henderson EE, Duker NJ, Deriel JK (1983) Enzymic detection of uracil in a cloned and sequenced deoxyribonucleic acid segment. Biochemistry 22:4501–4507

    Google Scholar 

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Braithwaite, A.W., Diver, W.P., Le Jeune, S. et al. Human cellular sequences detectable with adenovirus probes. Chromosoma 93, 537–544 (1986). https://doi.org/10.1007/BF00386796

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  • DOI: https://doi.org/10.1007/BF00386796

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