Skip to main content
Log in

HLA-JY328: Mapping studies and expression of a polymorphic HLA class I gene

  • Published:
Immunogenetics Aims and scope Submit manuscript

Abstract

The JY328 clone was identified in a human genomic library using cDNA corresponding to mRNA for HLA-B7 as a probe. The L/328 cell line was established by cotransformation of mouse Ltk cells with the herpes thymidine kinase gene and clone JY328. On Northern blots, RNA from,L/328 strongly hybridized to an HLA class I probe, and an antigen was recognized by an anti-HLA class I framework antibody on the cell surface. A DNA probe corresponding to a segment of intron 7 was developed by comparing the nucleotide sequence of clone JY328 with that of other HLA class I-type genes. Using the radiolabeled probe to screen Southern blots of DNA from families with siblings exhibiting intra-HLA recombinations, a restriction fragment length polymorphism was revealed —a 1.4 kb BstE II band not present in all individuals. A corresponding fragment was apparent in the base sequence of clone JY328. The occurrence of this band on Southern blots established that JY328 maps distinct from and centromeric to the HLA-C locus and near to the HLA-B locus. Antibody absorption studies and cytotoxicity tests indicated that the JY328 gene product was not an HLA-B antigen but that it did specifically absorb CW7-specific antibody. In sum, these results suggest a novel, polymorphic HLA class I gene which expresses a product serologically similar to HLA-Cw7 but which does not map within the corresponding locus.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Barbosa, J. A., Kamarck, M. E., Biro, P. A., Weissman, S. M., and Ruddle, F. H.: Identification of human genomic clones coding the major histocompatibility antigens HLA-A2 and HLA-B7 by DNA-mediated gene transfer. Proc. Natl. Acad. Sci. U. S. A. 79: 6327–6331, 1982

    Google Scholar 

  • Baur, M. P., Sigmund, S., Sigmund, M., and Rittner, C.: Analysis of MHC recombinant families. In E. D. Albert, M. P. Baur, and W. R. Mayr (eds.): Histocompatibility Testing 1984, pp. 324–325, Springer-Verlag, Berlin, 1984

    Google Scholar 

  • Biro, P. A., Periera, D., Sood, A. K., DeMartinville, B., Francke, U., and Weissman, S. M.: The structure of the human major histocompatibility locus. In C. Janeway, E. E. Sercarz, and H. Wigzell (eds.): Immunoglobulin Idiotypes. ICN-UCLA Symposium on Molecular and Cell Biology 20: 315–326, Academic Press, New York, 1981

    Google Scholar 

  • Bushkin, Y., Kunkel, H. G., Pernis, B., and Wang, C.-Y.: Evidence for a second receptor like molecule in a human TY-cell leukemia. In B. Pernis and H. J. Fogel (eds.): Cell Biology of the Major Histocompatibility Complex. Academic Press, New York, in press, 1985

    Google Scholar 

  • Carroll, M. C., Campbell, D. R., Bentley, D. R., and Porter, R. R.: A molecular map of the human major histocompatibility complex class III region linking complement genes C4, C2 and factor B. Nature 307: 237–241, 1984

    Google Scholar 

  • Carroll, M. C., Campbell, D. R., and Porter, R. R.: Mapping of steroid 21-hydroxylase genes adjacent to complement component C4 gene in HLA, the major histocompatibility complex in man. Proc. Natl. Acad. Sci. U. S. A. 82: 521–525, 1985

    Google Scholar 

  • Corley, R. B., LoCascio, N. J., Ovnic, M., and Haughton, G.: Two separate functions of class II (Ia) molecules: T-cell stimulation and B-cell excitation. Proc. Natl. Acad. Sci. U. S. A. 82: 516–520, 1985

    Google Scholar 

  • Corley, R. B., LoCascio, N. J., Ovnic, M., and Haughton, G.: Two separate functions of class II (Ia) molecules: T-cell stimulation and B-cell excitation. Proc. Natl. Acad. Sci. U.S.A. 82: 516–520, 1985

    Google Scholar 

  • Démant, P. and Iványi, D.: Further molecular complexities of H-2K and D-region antigens. Nature 290: 146–149, 1981

    Google Scholar 

  • Démant, P., Iványi, D., Oudshoorn-Snoek, M., Calafat, J., and Roos, M. H.: Molecular heterogeneity of H-2 antigens. Immunol. Rev. 60: 5–22, 1981

    Google Scholar 

  • Duceman, B. W., Srivastava, R., Collins, F. S.,Chorney, M., Greenspan, D. S., Biro, P. A., Sood, A., and Weissman, S. M.: Complexity of class I genes of the human major histocompati bility complex: Human class I MHC genes. In M. Ziff and S. B. Cohen (eds.): Advances in Inflammation Research: The Spondyloarthropathies, Vol. 9, Raven Press, New York, in press, 1985

    Google Scholar 

  • Erlich, H. A., Stettler, D., Sakai, R., Gladstone, P., and Pious, D.: Mapping of the genes encoding the HLA-DR alpha chain and the HLA-related antigens to a chromosome 6 deletion by using genomic blotting. Proc. Natl. Acad. Sci. U.S.A. 80: 2300–2304, 1983a

    Google Scholar 

  • Erlich, H. A., Stettler, D., Sheng-Dong, R., Ness, D., and Grumet, F. C.: Segregation and mapping analysis of polymorphic HLA class I restriction fragments: Detection of a novel fragment. Science 222: 72–74, 1983b

    Google Scholar 

  • Flaherty, L.: TLA region antigens. In M. E. Dorf (ed.): The Role of the Major Histocompatibility Complex in Immunology, pp. 33–57, Garland Press, New York, 1981

    Google Scholar 

  • Goodenow, R. S., McMillan, M., Nicholson, M., Sher, B. T., Eakle, K., Davidson, N., and Hood, L.: Identification of the class I genes of the mouse major histocompatibility complex by DNA-mediated gene transfer. Nature 300: 231–237, 1982

    Google Scholar 

  • Goodfellow, P. N. and Payne, R. O.: Serological studies of Cwl and Cw3 expressed on the same haplotype. Tissue Antigens 11: 350–356, 1978

    Google Scholar 

  • Grumet, F. C., Fish, L., Mossazadeh, J., Ness, D., and Duceman, B. W.: An HLA-B locus probe clarifies endonuclease polymorphism of major histocompatibility complex class I genes. Mol. Biol. Med. 1: 501–509, 1983

    Google Scholar 

  • Hansen, T. H., Ozato, K., Melino, M. R., Coligan, J. E., Eindt, T. J., Jandinski, J., and Sachs, D. H.: Immunochemical evidence in two haplotypes for at least three D region-encoded molecules, D, L, and R. J. Immunol. 126: 1713–1716, 1981

    Google Scholar 

  • Hood, L., Steinmetz, M., and Malissen, B.: Genes of the major histocompatibility complex of the mouse. Annu. Rev. Immunol. 1: 529–568, 1983

    Google Scholar 

  • Ivänyi, D. and Démant, P.: Serological characterization of previously unknown H-2 molecules identified in the products of the Kd and D kregion. Immunogenetics 12: 397–408, 1981

    Google Scholar 

  • Kavathas, P., DeMars, R., Bach, F. H., and Shaw, S.: SB: A new HLA-linked human histocompatibility gene defined using HLA-mutant cell lines. Nature 293: 747–749, 1981

    Google Scholar 

  • Kress, M., Glaros, D., Khoury, G., and Jay, G.: Alternative RNA splicing in expression of the H-2K gene. Nature 306: 602–604, 1983

    Google Scholar 

  • Lalanne, J.-L., Cochet, M., Kummer, A.-M., Gachelin, G., and Kanilsky, P.: Different intron-exon organization at the 5′ part of a mouse class I gene is used to generate a novel H-2Kd-related mRNA. Proc. Natl. Acad. Sci. U.S.A. 80: 7561–7565, 1983

    Google Scholar 

  • Lillehoj, E. P., Hansen, T. H., Sachs, D. H., and Coligan, J. E.: Primary structural evidence that the H-2DQ region encodes at least three distinct gene products: D, L and R. Proc. Natl. Acad. Sci. U.S.A. 81: 2499–2503, 1984

    Google Scholar 

  • Lizak, G. and Grumet, F. C.: A new micromethod for the in vitro detection of antiplatelet antibodies: C-FDA thrombocytotoxicity. Hum. Immunol. 1: 87–96, 1980

    Google Scholar 

  • Lizak, G. and Grumet, F. C.: Detection of anti-platelet antibodies by anti-kappa light chain facilitation of c-FDA (KC-FDA) thrombocytotoxicity. Hum. Immunol. 8: 265–271, 1983

    Google Scholar 

  • Melino, M.R., Nichols, E.A., Strausser, H.R., and Hansen, T.H.: Characterization of H-2Db antigens implies haplotype differences in the number of H-2 molecules expressed. J. Immunol. 129: 222–226, 1982

    Google Scholar 

  • Olive, D., Dubreuil, P., and Mawas, C.: Two distinct TL-like molecular subsets defined by monoclonal antibodies on the surface of human thymocytes with different expression on leukemia lines. Immunogenetics 20: 253–264, 1984

    Google Scholar 

  • Orr, H. T. and DeMars, R.: Class 1-like HLA genes map telomeric to the HLA-A2 locus in mammalian cells. Nature 302: 534–536, 1983

    Google Scholar 

  • Ploegh, H. L., Orr, H. T., and Strominger, J. L.: Major histocompatibility antigens: The human (HLA-A, -B, -C) and murine (H-2K, H-2D) class I molecules. Cell 24: 287–299, 1981

    Google Scholar 

  • Scofield, V. L., Schlumpberger, J. M., West, L. A., and Weissman, I. L.: Protochordate allorecognition is controlled by an MHC-like gene system. Nature 295: 499–502, 1982

    Google Scholar 

  • Shaw, S., Kavathas, P., Pollack, M. S., Charmot, D., and Mawas, C.: Family studies define a new histocompatibility locus, SB, between HLA-DR and Glo. Nature 293: 745–747, 1981

    Google Scholar 

  • Sood, A. K., Pereira, D., and Weissman, S. M.: Isolation and partial nucleotide sequence of a cDNA clone for human histocompatibility antigen HLA-B7 by use of an oligodeoxy-nucleotide primer. Proc. Natl. Acad. Sci. U.S.A. 78: 616–620, 1981

    Google Scholar 

  • Sood, A. K., Pan, J., Biro, P. A., Pereira, D., Srivastava, R., Reddy, V. B., Duceman, B. W., and Weissman, S. M.: Structure and polymorphism of class I MHC antigen mRNA. Immunogenetics 22: 101–121, 1985

    Google Scholar 

  • Srivastava, R., Duceman, B., Biro, P. A., Sood, A. K., and Weissman, S. M.: Molecular organization of the class I genes of the human major histocompatibility complex. Immunol. Rev. 84: 93–112, 1985

    Google Scholar 

  • Steinmetz, M., Winoto, A., Minard, H., and Hood, L.: Clusters of genes encoding mouse transplantation antigens. Cell 28: 489–498, 1982

    Google Scholar 

  • Thomas, P. S.: Hybridization of denatured RNA and small DNA fragments transferred to nitrocellulose. Proc. Natl. Acad. Sci. U.S.A. 77: 5201–5205, 1980

    Google Scholar 

  • Tryphonas, M., King, D. P., and Jones, P. P.: Identification of a second class I antigen controlled by the K end of the H-2 complex and its selective cellular expression. Proc. Natl. Acad. Sci. U.S.A. 80: 1445–1448, 1983

    Google Scholar 

  • Van Agthoven, A. J., Lemonnier, F. A., Kourilsky, F. M., and Jordan, B. R.: Transformation of LMTK- cells with purified HLA class I genes. IV. A determinant on (9-2 microglobulin is controlled by HLA heavy chain in a mouse-human hybrid complex: A biochemical analysis. Mol. Immunol. 21: 175–179, 1984

    Google Scholar 

  • Van de Rijn, M., Lerch, P. G., Knowles, R. W., and Terhorst, C.: The thymic differentiation markers T6 and M241 are two unusual MHC class I antigens. J. Immunol. 131: 851–855, 1983

    Google Scholar 

  • Wigler, M., Sweet, R., Sim, G. K., Wold, B., Pellicer, A., Lacy, E., Maniatis, T., Silverstein, S., and Axel, R.: Transformation of mammalian cells with genes from procaryotes and eucaryotes. Cell 16: 777–785, 1979

    Google Scholar 

  • Winoto, A., Steinmetz, M., and Hood, L.: Genetic mapping in the major histocompatibility complex by restriction enzyme site polymorphism. Most mouse class I genes map to the TL2 complex. Proc. Natl. Acad. Sci. U.S.A. 80: 3425–3429, 1983

    Google Scholar 

  • Zinkernagel, R. M. and Doherty, P. C.: MHC restricted cytotoxic T cells: Studies on the biological role of polymorphic major transplantation antigens determining T-cell restriction-specificity, function and responsiveness. Adv. Immunol. 27: 51–77, 1980

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Duceman, B.W., Ness, D., Rende, R. et al. HLA-JY328: Mapping studies and expression of a polymorphic HLA class I gene. Immunogenetics 23, 90–99 (1986). https://doi.org/10.1007/BF00377967

Download citation

  • Received:

  • Revised:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00377967

Keywords

Navigation