Skip to main content
Log in

Localization of the B-hordein locus on barley chromosomes using fluorescence in situ hybridization

  • Original Articles
  • Published:
Chromosoma Aims and scope Submit manuscript

Abstract

The B-hordein gene family consists of at least 13 genes that appear to be clustered in two regions on the barley chromosome 1H (5). Using fluorescence in situ hybridization techniques, we have localized the B-hordein locus (Hor2) to the distal end of the short arm of chromosome 1H (5), corresponding to the genetically determined position, 91% distal on the short arm. This result is based on appropriate barley lines (i.e. the two cultivars Igri and Betzes, the telotrisomic and ditelotetrasomic lines 1HS and the translocation line T21), on two experimental approaches and on a signal frequency of between 20% and 60% on metaphase chromosomes.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Ainsworth CC, Miller TE, Gale MD (1986) The genetic control of gain esterases in hexaploid wheat. II. Homoeologous loci in related species. Theor Appl Genet, 72: 219–225

    Google Scholar 

  • Ambros PF, Matzke MA, Matzke AJM (1986) Detection of a 17 kb unique sequence (T-DNA) in plant chromosomes by in situ hybridization. Chromosoma 94: 11–18

    Google Scholar 

  • Brandt A, Montembault A, Cameron-Mills V, Rasmussen SK (1985) Primary structure of a B1 hordein gene from barley. Carlsberg Res Commun 50: 333–345

    Google Scholar 

  • Clark M, Karp A, Archer S (1989) Physical mapping of the B-hordein loci on barley chromosome 5 by in situ hybridization. Genome 32: 925–929

    Google Scholar 

  • Curtis CA, Lukaszewski AJ (1991) Genetic linkage between C-bands and storage protein genes in chromosome 1B of tetraploid wheat. Theor Appl Genet 81: 245–252

    Google Scholar 

  • Doll H, Brown ADH (1979) Hordein variation in wild (Hordeum spontaneum) and cultivated (H. vulgare) barley. Can J Genet Cytol 21: 391–404

    Google Scholar 

  • Gall JG, Pardue ML (1969) Formation and detection of RNA-DNA hybrid molecules in cytological preparations. Proc Natl Acad Sci USA 63: 378–383

    Google Scholar 

  • Gerhard DS, Kawasaki ES, Bancroft FC, Szabo P (1981) Localization of a unique gene by direct hybridization in situ. Proc Natl Acad Sci USA 78: 3755–3759

    Google Scholar 

  • Gerlach WL, Peacock WJ (1980) Chromosomal localization of highly repeated DNA sequences in wheat. Heredity 44: 269–276

    Google Scholar 

  • Gustafson JP, Butler E, McIntyre CL (1990) Physical mapping of a low copy DNA sequence in rye (Secale cereale L.). Proc Natl Acad Sci USA 87: 1899–1902

    Google Scholar 

  • Harper ME, Saunders GF (1981) Localization of single copy DNA sequences on G-banded human chromosomes by in situ hybridization. Chromosoma 83: 431–439

    Google Scholar 

  • Huang P-L, Hahlbrock K, Somssich I (1988) Detection of a single-copy gene on plant chromosomes by in situ hybridization. Mol Gen Genet 211: 143–147

    Google Scholar 

  • Hutchinson J, Lonsdale DM (1982) The chromosomal distribution of cloned highly repetitive sequences from hexaploid wheat. Heredity 48: 377–381

    Google Scholar 

  • Jensen J (1990) Co-ordinators report: chromosome 5. Barley Genet Newslett 20: 78–80

    Google Scholar 

  • Jensen J, Jørgensen JH, Jensen HP, Giese H, Doll H (1980) Linkage of hordein loci Hor 1 and Hor 2 with the powdery mildew resistance loci Ml-k and Ml-a on barley chromosome 5. Theor Appl Genet 58: 27–31

    Google Scholar 

  • John HA, Birnstiel ML, Jones KW (1969) RNA-DNA hybrids at the cytological level. Nature 223: 582–587

    Google Scholar 

  • Johnson GD, Arujo Nogueira GM (1981) A simple method of reducing the fading of immunofluorescence during microscopy. J Immunol Methods 43: 349–350

    Google Scholar 

  • Kievits T, Devilee P, Wiegant J, Wapenaar MC, Cornelisse CJ, Ommen GJBvan, Pearson PL (1990) Direct nonradioactive in situ hybridization of somatic cell hybrid DNA to human lymphocyte chromosomes. Cytometry 11: 105–109

    Google Scholar 

  • Kleine M, Michalek W, Graner A, Herrmann RG, Jung C (1993) Construction of a barley (Hordeum vulgare L.) YAC library and isolation of a Hor 1-specific clone. Mol Gen Genet (in press)

  • Kreis M, Williamson MS, Forde J, Clarke J, Buxton B, Pywell J, Marris C, Gallois P, Shewry PR (1987) Structure and regulation of expression of seed protein genes in barley. Plant Physiol Biochem 25: 291–302

    Google Scholar 

  • Langer-Safer P, Levine M, Ward DC (1982) Immunological method for mapping genes on Drosophila polytene chromosomes. Proc Natl Acad Sci USA 79: 4381–4385

    Google Scholar 

  • Lapitan NVL, Ganal MW, Tanksley SD (1989) Somatic chromosome karyotype of tomato based on in situ hybridization of the TGRI satellite repeat. Genome 32: 992–998

    Google Scholar 

  • Lawrence JB, Villnave CA, Singer RH (1988) Sensitive, high-resolution chromatin and chromosome mapping in situ: presence and orientation of two closely integrated copies of EBV in a lymphoma line. Cell 52: 51–61

    Google Scholar 

  • Lawrence JB, Singer RH, McNeil JA (1990) Interphase and metaphase resolution of different distances within the human dystrophin gene. Science 249: 928–932

    Google Scholar 

  • Lehfer HC, Wanner G, Herrmann RG (1991) Physical mapping of DNA sequences on plant chromosomes by light microscopy and high resolution scanning electron microscopy. In: Herrmann RG, Larkins BA (eds) Plant molecular biology 2. (NATO ASI series A: life sciences vol 212) Plenum Press, New York and London, pp 277–284

    Google Scholar 

  • Leitch IJ, Leitch AR, Heslop-Harrison JS (1991) Physical mapping of plant DNA sequences by simultaneous in situ hybridization of two differently labelled fluorescent probes. Genome 34: 329–333

    Google Scholar 

  • Lichter P, Cremer T, Borden J, Manuelidis L, Ward DC (1988) Delineation of individual human chromosomes in metaphase and interphase cells by in situ suppression hybridization using recombinant DNA libraries. Hum Genet 80: 224–234

    Google Scholar 

  • Linde-Laursen IB (1975) Giemsa C-banding of the chromosomes of ‘Emir’ barley. Hereditas 81: 285–289

    Google Scholar 

  • Lukaszewski AJ (1992) A comparison of physical distribution of recombination in chromosome 1R in diploid rye and in hexaploid triticale. Theor Appl Genet 83: 1048–1053

    Google Scholar 

  • Maluszynska J, Schweizer D (1989) Ribosomal RNA genes in B chromosomes of Crepis capillaris detected by non-radioactive in situ hybridization. Heredity 62: 59–65

    Google Scholar 

  • Maluszynska J, Heslop-Harrison JS (1991) Localization of tandemly repeated DNA sequences in Arabidopsis thaliana. Plant J 1: 159–166

    Google Scholar 

  • Manuelidis L, Langer-Safer P, Ward DC (1982) High resolution mapping of satellite DNA using biotin labeled DNA probes. J Cell Biol 95: 619–625

    Google Scholar 

  • Mouras A, Saul MW, Essad S, Potrykus I (1987) Localization by in situ hybridization of a low copy chimaeric resistance gene introduced into plants by direct gene transfer. Mol Gen Genet 207: 204–209

    Google Scholar 

  • Nederlof PM, Robinson D, Abuknesha R, Wiegant J, Hopman AHN, Tanke HJ, Raap AK (1989) Three-color fluorescence in situ hybridization for the simultaneous detection of multiple nucleic acid sequences. Cytometry 11: 20–27

    Google Scholar 

  • Nederlof PM, Flier S van der, Raap AK, Tanke HJ, Ploem JS, Ploeg M van der (1990) Multiple fluorescence in situ hybridization. Cytometry 11: 126–131

    Google Scholar 

  • Nicoloff H, Anastosseva-Kristeva M, Künzel G (1977) Changes in nucleolar activity due to segmental interchanges between satellite chromosomes in barley. Biol Zentralbl 96: 223–227

    Google Scholar 

  • Pinkel D, Straume T, Gray JW (1986) Cytogenetic analysis using quantitative, high-sensitivity, fluorescence hybridization. Proc Natl Acad Sci USA 83: 2934–2938

    Google Scholar 

  • Pinkel D, Landegent J, Collins C, Fuscoe J, Segraves R, Lucas J, Gray J (1988) Fluorescence in situ hybridization with human chromosome specific libraries: Detection of trisomy 21 and translocations of chromosome 4. Proc Natl Acad Sci USA 85: 9138–9142

    Google Scholar 

  • Rayburn AL, Gill BS (1985) Use of biotin-labeled probes to map specific DNA sequences on wheat chromosomes. J Hered 76: 78–81

    Google Scholar 

  • Rayburn AL, Gill BS (1987) Molecular analysis of the B-genome of the Triticeae. Theor Appl Genet 73: 385–388

    Google Scholar 

  • Schondelmaier J, Martin R, Jahoor A, Houben A, Graner A, Koop HU, Herrmann RG (1993) Microdissection and microcloning of the barley (Hordeum vulgare L.) chromosome 1HS. Theor Appl Genet (in press)

  • Schwarzacher T, Heslop-Harrison JS (1991) In situ hybridization to plant telomeres using synthetic oligomers. Genome 34: 317–323

    Google Scholar 

  • Shewry PR, Parmar S, Franklin J, Burgess SR (1990) Analysis of a rare recombination event within the multigene Hor2 locus of barley (Hordeum vulgare L.). Genet Res 55: 171–176

    Google Scholar 

  • Siedler H, Graner A (1991) Construction of physical maps of the Hor1 locus of two barley cultivars by pulsed field gel electrophoresis. Mol Gen Genet 226: 177–181

    Google Scholar 

  • Simpson PR, Newman MA, Davies DR (1988) Detection of legumin gene sequences in pea in situ hybridization. Chromosoma 96: 454–458

    Google Scholar 

  • Sørensen MB (1989) Mapping of the Hor2 locus in barley by pulsed field gel electrophoresis. Carlsberg Res Commun 54: 109–120

    Google Scholar 

  • Trask BJ (1991a) Fluorescence in situ hybridization: applications in cytogenetics and gene mapping. Trends Genet 7: 149–154

    Google Scholar 

  • Trask BJ (1991b) Gene mapping by in situ hybridization. Current Opin Genet Dev 1: 82–87

    Google Scholar 

  • Wanner G, Formanek H, Martin R, Herrmann RG (1991) High-resolution scanning electron microscopy of plant chromosomes. Chromosoma 100: 103–109

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Additional information

Communicated by: D. Schweizer

Rights and permissions

Reprints and permissions

About this article

Cite this article

Lehfer, H., Busch, W., Martin, R. et al. Localization of the B-hordein locus on barley chromosomes using fluorescence in situ hybridization. Chromosoma 102, 428–432 (1993). https://doi.org/10.1007/BF00360408

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00360408

Keywords

Navigation