Summary
Mistranslated derivatives of the coat protein of the bacteriophage MS2 were isolated from infected cells starved for asparagine. This protein contains a high level of lysine for asparagine substitutions. By peptide analysis and amino acid sequencing we show that there is a six-fold greater frequency of errors at AAU codons than at AAC codons. This ratio is the same as that found in unstarved cells where the overall error frequency is 100-fold less. We also demonstrate that, at least for AAC codons, context affects error frequency.
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Bossi L (1983) Context effects: translation of UAG codon by suppressor tRNA is affected by the sequence following UAG in the message. J Mol Biol 164:73–87
Bossi L, Roth JR (1980) The influence of codon context on genetic code translation. Nature 286:123–127
Bouadloun F, Donner D, Kurland CG (1983) Codon-specific missense errors in vivo. EMBO J 2:1351–1356
Edelmann P, Gallant J (1977) Mistranslation in E. coli. Cell 10:131–137
Gorini L (1974) Streptomycin and misreading of the genetic code. In: Nomura M, Tissières A, Lengyel P (eds) Ribosomes, Cold Spring Harbor Laboratory, New York, p 791
Grant GA, Sacchet JC, Welgus HG (1983) A collagenolytic serine protease with trypsin-like specificity from the fiddler crab Uca pugilator. Biochemistry 22:354–358
Grosjean H, Fiers W (1982) Preferential codon usage in prokaryotic genes: the optimal codon-anticodon interaction energy and the selective codon usage in efficiently expressed genes. Gene 18:199–209
Harley CB, Pollard JW, Chamberlain JW, Stanners CP, Goldstein S (1980) Protein synthetic errors do not increase during aging of cultured human fibroblasts. Proc Natl Acad Sci USA 77:1885–1889
Konigsberg W, Weber K, Notani G, Zinder N (1966) The isolation and characterization of the tryptic peptides from the f2 bacteriophage coat protein. J Biol Chem 241:2579–2588
Loftfield RB (1963) The frequency of errors in protein biosynthesis. Biochem J 89:82–92
Loftfield RB, Vanderjagt D (1972) The frequency of errors in protein biosynthesis. Biochem J 128:1353–1356
Miller JH, Albertini AM (1983) Effects of surrounding sequence on the suppression of nonsense codons. J Mol Biol 164:59–71
Min Jou W, Haegeman G, Ysebaert M, Fiers W (1972) Nucleotide sequence of the gene coding for the bacteriophage MS2 coat protein. Nature 237:82–88
Neidhardt FC, Bloch PL, Smith DF (1974) Culture medium for enterobacteria. J Bacteriol 119:736–747
O'Farrell PH (1975) High resolution two-dimensional electrophoresis of protein. J Biol Chem 250:4007–4021
O'Farrell PH (1978) The suppression of defective translation by ppGpp and its role in the stringent response. Cell 14:545–557
O'Farrell PZ, Goodman HM, O'Farrell PH (1977) High resolution two-dimensional electrophoresis of basic as well as acidic proteins. Cell 12:1133–1142
Parker J, Johnston TC, Borgia PT (1980) Mistranslation in cells infected with the bacteriophage MS2; direct evidence of Lys for Asn substitution. Mol Gen Genet 180:275–281
Parker J, Johnston TC, Borgia PT, Holtz G, Remaut E, Fiers W (1983) Codon usage and mistranslation. In vivo basal level misreading of the MS2 coat protein message. J Biol Chem 258:10007–10012
Parker J, Pollard JW, Friesen JD, Stanners CP (1978) Stuttering: high-level mistranslation in animal and bacterial cells. Proc Natl Acad Sci USA 75:1091–1095
Pedersen S, Reeh SV, Parker J, Watson RJ, Friesen JD, Fiil NP (1976) Analysis of the proteins synthesized in ultraviolet light-irradiated Escherichia coli following infection with the bacteriophages λdrif d18 and λdfus-3. Mol Gen Genet 144:339–343
Smyth DG (1967) Techniques in enzymic hydrolysis. Meth Enzymol 11:214–231
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Communicated by A. Böck
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Johnston, T.C., Borgia, P.T. & Parker, J. Codon specificity of starvation induced misreading. Mol Gen Genet 195, 459–465 (1984). https://doi.org/10.1007/BF00341447
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DOI: https://doi.org/10.1007/BF00341447