Summary
In Saccharomyces cerevisiae, the genes ARO3 and ARO4 encode isoenzymes of 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) synthase. Both genes are derepressed seven-fold under the general control of amino acid biosynthesis. A previously isolated 1.7kb fragment containing the ARO3 gene and the 5′- and 3′-flanking regions was sequenced. The endpoints of the ARO3 transcript coding for a 370 amino acid protein were mapped by primer extension experiments and S1 nuclease digestion. Promoter elements involved in transcription initiation and responsible for the strong general control derepression response are discussed.
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Aebi M, Furter R, Prantl F, Niederberger P, Hütter R (1984) Structure and function of the TRP3 gene of Saccharomyces cerevisiae: Analysis of transcription, promoter sequence, and sequence coding for a glutamine amidotransferase. Curr Genet 8:165–172
Arndt K, Fink GR (1986) GCN4 protein, a positive transcription factor in yeast, binds general control promoters at all 5′TGACTC3′ sequences. Proc Natl Acad Sci USA 83:8516–8520
Aviv H, Leder P (1972) Purification of biologically active globulin mRNA by chromatography on oligo thymidilic acid cellulose. Proc Natl Acad Sci USA 69:1408–1412
Beggs JD (1978) Transformation of yeast by a replicating hybrid plasmid. Nature 275:104–109
Bennetzen JL, Hall BD (1982) Codon selection in yeast. J Biol Chem 257:3026–3031
Braus G, Luger K, Paravicini G, Schmidheini T, Kirschner K, Hütter R (1988) The role of the TRP1 gene in yeast tryptophan biosynthesis. J Biol Chem 263:7868–7875
Burke JF (1984) High sensitivity S1 mapping with single-stranded 32P DNA probes synthesized from bacteriophage M13mp templates. Gene 30:63–68
Chen W, Struhl K (1985) Yeast mRNA initiation sites are determined primarily by specific sequences, not by the distance from the TATA element. EMBO J 4:3273–3280
Davies WD, Davidson BE (1982) The nucleotide sequence of aroG, the gene for 3-deoxy-D-arabino-heptulosonate-7-phosphate synthetase (phe) in Escherichia coli K12. Nucleic Acids Res 10:4045–4058
Dobson MJ, Tuite MF, Mellor J, Roberts NA, King RM, Burke DC, Kingsman AJ, Kingsman S (1983) Expression of Saccharomyces cerevisiae of human interferon-alpha directed by the TRP1 5′ region. Nucleic Acids Res 11:2289–2302
Donahue TF, Farabaugh PF, Fink GR (1982) The nucleotide sequence of the HIS4 region of yeast. Gene 18:47–59
Donahue TF, Daves RS, Lucchini G, Fink GR (1983) A short nucleotide sequence required for regulation of HIS4 by the general control system of yeast. Cell 32:89–98
Erhart E, Hollenberg CP (1983) The presence of a defective LEU2 gene on 2 μm DNA recombinant plasmids of Saccharomyces cerevisiae is responsible for curing and high copy number. J Bacteriol 156:625–635
Furter R, Paravicini G, Aebi M, Braus G, Prantl F, Niederberger P, Hütter R (1986) The TRP4 gene of Saccharomyces cerevisiae: Isolation and structural analysis. Nucleic Acids Res 14:6357–6373
Furter R, Braus G, Paravicini G, Mösch HU, Niederberger P, Hütter R (1988) Regulation of the TRP4 gene of Saccharomyces cerevisiae at the transcriptional level and functional analysis of its promoter. Mol Gen Genet 211:168–175
Hill DE, Hope IA, Macke JP, Struhl K (1986) Saturation mutagenesis of the yeast HIS3 regulatory site: Requirements for transcriptional induction and for binding by GCN4 activator protein. Science 234:451–457
Hinnebusch AG (1986) The general control of amino acid biosynthetic genes in the yeast Saccharomyces cerevisiae. CRC Crit Rev Biochem 21:277–315
Hinnebusch AG, Fink GR (1983) Repeated DNA sequences upstream from HIS1 also occur at several other co-regulated genes in Saccharomyces cerevisiae. J Biol Chem 258:5238–5247
Hope IA, Struhl K (1985) GCN4 protein, synthesized in vitro, binds HIS3 regulatory sequences: Implications for general control of amino acid biosynthetic genes in yeast. Cell 43:177–188
Hsiao C, Carbon J (1979) High-frequency transformation of yeast by plasmids containing the cloned ARG4 gene. Proc Natl Acad Sci USA 76:3829–3833
Kassavetis GA, Geiduschek EP (1982) Bacteriophage T4 late promoters: mapping 5′-ends of T4 gene 23S mRNAs. EMBO J 1:107–114
Lämmli UK (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227:680–685
Lingens F, Goebel W, Uesseler H (1967) Regulation der Biosynthese der aromatischen Aminosäuren in Saccharomyces cerevisiae. Eur J Biochem 1:363–374
Meuris P, Lacroute F, Slonimski PP (1967) Etude systématique de mutants inhibés par leurs propres métabolites chez la levure Saccharomyces cerevisiae. Genetics 56:149–161
Miozzari G, Niederberger P, Hütter R (1978) Tryptophan biosynthesis in Saccharomyces cerevisiae: control of the flux through the pathway. J Bacteriol 134:48–59
Nevins JR (1983) The pathway of eukaryotic mRNA formation. Annu Rev Biochem 52:441–466
Niederberger P, Miozzari G, Hütter R (1981) Biological role of the general control of amino acid biosynthesis in Saccharomyces cerevisiae. Mol Cell Biol 1:584–593
Pittard J, Camakris J, Wallace BJ (1969) Inhibition of 3-deoxy-D-arabino-heptulosonic acid-7-phosphate synthetase (trp) in Escherichia coli. J Bacteriol 92:1242–1247
Rose M, Grisafi P, Botstein D (1984) Structure and function of the yeast URA3 gene: expression in Escherichia coli. Gene 29:113–124
Sanger F, Nicklen S, Coulson AR (1977) DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci USA 74:5463–5467
Sherman F, Fink GR, Lukins HB (1970) Methods in yeast genetics. Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, pp 11–21
Smith GE, Summers MD (1980) The bidirectional transfer of DNA and RNA to nitrocellulose or diazobenzyloxyamethyl paper. Anal Biochem 109:123–129
Struhl K (1982) Regulatory sites for HIS3 gene expression in yeast. Nature 300:284–287
Struhl K (1987) Promoters, activator proteins, and the mechanism of transcriptional initiation in yeast. Cell 49:295–297
Takahashi M, Chan WWC (1971) Separation and properties of isozymes of 3-deoxy-D-arabino-heptulosonate-7-phosphate synthetase from Saccharomyces cerevisiae. Can J Biochem 49:1015–1025
Teshiba S, Furter R, Niederberger P, Braus G, Paravicini G, Hütter R (1986) Cloning of the ARO3 gene of Saccharomyces cerevisiae and its regulation. Mol Gen Genet 205:353–357
Zalkin H, Yanofsky C (1982) Yeast gene TRP5: structure, funtion, regulation. J Biol Chem 257:1491–1500
Zalkin H, Paluh JL, van Cleemput M, Moye WS, Yanofsky C (1984) Nucleotide sequence of Saccharomyces cerevisiae genes TRP2 and TRP3 encoding bifunctional anthranilate synthase: indole-3-glycerol phosphate synthase. J Biol Chem 259:3985–3992
Zaret KS, Sherman F (1982) DNA sequence required for efficient transcription termination in yeast. Cell 28:563–573
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Paravicini, G., Braus, G. & Hütter, R. Structure of the ARO3 gene of Saccharomyces cerevisiae . Mol Gen Genet 214, 165–169 (1988). https://doi.org/10.1007/BF00340197
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DOI: https://doi.org/10.1007/BF00340197