Summary
DNA gyrase (ATP dependent topoisomerase type II, EC 5.99.1.3) was found to be essential for the expression of the Klebsiella pneumoniae nitrogen fixation gene cluster carried by plasmid pRD1 in Escherichia coli. In the absence of DNA gyrase activity, nitrogen fixation activity could be restored by providing a constitutively expressed nifA function in trans. Our results suggest that nif gene regulation by oxygen may be mediated through the alteration of the superhelical status of the promoter of the nifLA regulatory operon, in addition to the action of the nifL gene product.
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References
Bielinska A, Hulanicka D (1986) Effect of DNA gyrase inhibitors and urea on the expression of cysB, the regulatory gene of the cysteine regulon. J Gen Microbiol 132:2571–2576
Buchanan-Wollaston V, Cannon MC, Beynon JL, Cannon FC (1981) Role of the nifA gene product in the regulation of nif expression in Klebsiella pneumoniae. Nature 294:776–778
Cannon M, Hill S, Kavangh E, Cannon F (1985) A molecular genetic study of nif expression in Klebsiella pneumoniae at the level of transcription, translation and nitrogenase activity. Mol Gen Genet 198:198–206
Cohen SN, Chang ACY, Hsu L (1972) Nonchromosomal antibiotic resistance in bacteria: genetic transformation of Escherichia coli by R-factor. Proc Natl Acad Sci USA 69:2110–2114
Ditta G, Schmidhauser T, Yakobson E, Lu P, Liang X, Finlay DR, Guiney D, Helinski DR (1985) Plasmids related to the broad host range vector, pRK290, useful for gene cloning and for monitoring gene expression. Plasmid 13:149–153
Dixon RA (1984) The genetic complexity of nitrogen fixation. J Gen Microbiol 130:2745–2755
Dixon R, Cannon F, Kondorosi A (1976) Construction of a P plasmid carrying nitrogen fixation genes from Klebsiella pneumoniae. Nature 260:268–271
Dixon R, Kennedy C, Kondorosi A, Krishnapillai V, Merrick M (1977) Complementation analysis of Klebsiella pneumoniae mutants defective in nitrogen fixation. Mol Gen Genet 157:189–198
Drummond M, Clements J, Merrick M, Dixon R (1983) Positive control and autogenous regulation of the nifLA promoter in Klebsiella pneumoniae. Nature 301:302–307
Eady RR, Issack R, Kennedy C, Postgate JR, Ratcliffe HD (1978) Nitrogenase synthesis in Klebsiella pneumoniae: comparison of ammonium and oxygen regulation. J Gen Microbiol 104:277–285
Filser M, Merrick M, Cannon F (1983) Cloning and characterization of nifLA regulatory mutations from Klebsiella pneumoniae. Mol Gen Genet 191:485–491
Gellert M (1981) DNA topoisomerases. Annu Rev Biochem 50:879–910
Gillespie D, Spiegelman S (1965) A quantitative assay for DNA-RNA hybrids with DNA immobilized on a membrane. J Mol Biol 12:829–842
Hanahan D (1983) Studies on transformation of E. coli with plasmids. J Mol Biol 166:557–580
Hill S, Kennedy C, Kavanagh E, Goldberg RB, Hanau R (1981) Nitrogen fixation gene (nifL) involved in oxygen regulation of nitrogenase synthesis in K. pneumoniae. Nature 290:424–426
Kong QT, Wu QL, Ma ZF, Shen SC (1986) Oxygen sensitivity of the nifLA promoter of Klebsiella pneumoniae. J Bacteriol 166:353–356
Kranz RG, Haselkorn R (1986) Anaerobic regulation of nitrogen fixing gene in Rhodopseudomonas capsulata. Proc Natl Acad Sci USA 83:6805–6809
MacNeil D (1981) General method using Mu-Mudl dilysogens to determine the direction of transcription of and generate deletions in the glnA region of Escherichia coli. J Bacteriol 146:260–268
MacNeil D, Zhu J, Brill WJ (1981) Regulation of nitrogen fixation in Klebsiella pneumoniae: isolation and characterization of strain with nif-lac fusions. J Bacteriol 145:348–357
MacNeil T, MacNeil D, Tyler BL (1982) Fine structure deletion map and complementation analysis of the glnA-glnL-glnG region in E. coli. J Bacteriol 121:1302–1313
Magasanik B (1982) Genetic control of nitrogen assimilation in bacteria. Annu Rev Genet 16:135–168
Maniatis T, Fritsch EF, Sambrook J (1982) Molecular cloning. A laboratory manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York
Merrick M (1983) Nitrogen control of the nif regulation in Klebsiella pneumoniae: involvement of the ntrA gene and analogies between ntrC and nifA. EMBO J 2:39–44
Merrick M, Hill S, Hennecke H, Hahn M, Dixon R, Kennedy C (1982) Repressor properties of the nifL gene product in Klebsiella pneumoniae. Mol Gen Genet 185:75–81
Miller JH (1972) Experiments in molecular biology. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York, pp 354–358
Mizuuchi K, Mizuuchi M, O'dea MH, Gellert M (1984) Cloning and simplified purification of E. coli DNA gyrase A and B proteins. J Biol Chem 259:9199–9201
Novak PD, Maier RJ (1987) Inhibition of hydrogenase synthesis by DNA gyrase inhibitors in Bradyrhizobium japonicum. J Bacteriol 169:2708–2712
Otter R, Cozzarelli NR (1983) E. coli DNA gyrase. Methods Enzymol 100:171–180
Ow DW, Ausubel FM (1983) Regulation of nitrogen metabolism genes by nifA gene product in Klebsiella pneumoniae. Nature 301:307–313
Pühler A, Klipp W (1981) Fine structure analysis of the gene region for N2 fixation (nif) of Klebsiella pneumoniae, In: Bothe H, Trebst A (eds) Biology of inorganic nitrogen and sulphur. Springer, Berlin Heidelberg New York, pp 276–286
Rao RN, Rogers SG (1978) A thermoinduiclbe λ-phage-ColEI plasmid chimera for the overproduction of gene products from cloned DNA segments. Gene 3:247–263
Rigby PWJ, Dieckmann M, Rhodes C, Berg P (1977) Labelling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I. J Mol Biol 113:237–251
Roberts GP, Brill WJ (1981) Genetics and regulation of nitrogen fixation. Annu Rev Microbiol 35:207–235
Robson RL, Postgate JR (1980) Oxygen and hydrogen in biological nitrogen fixation. Annu Rev Microbiol 34:183–1207
Rudd KE, Menzel R (1987) his operons of Escherichia coli and Salmonella typhimurium are regulated by DNA supercoiling. Proc Natl Acad Sci USA 84:517–521
Sanzey B (1979) Modulation of gene expression by drugs affecting DNA gyrase. J Bacteriol 138:40–47
Thomas PS (1981) Hybridization of denatured RNA and small DNA fragments transferred to nitrocellulose. Proc Natl Acad Sci USA 77:5201–5205
Wang JC (1985) DNA topoisomerases. Annu Rev Biochem 54:665–697
Yamamoto N, Droffner ML (1985) Mechanisms determining aerobic or anaerobic growth in the facultative anaerobe Salmonella typhimurium. Proc Natl Acad Sci USA 82:2077–2081
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Communicated by J. Schell
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Dimri, G.P., Das, H.K. Transcriptional regulation of nitrogen fixation genes by DNA supercoiling. Mol Gen Genet 212, 360–363 (1988). https://doi.org/10.1007/BF00334707
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DOI: https://doi.org/10.1007/BF00334707