Skip to main content
Log in

Nucleotide sequence of cDNA clones encoding the complete “33 kDa” precursor protein associated with the photosynthetic oxygen-evolving complex from spinach

  • Published:
Molecular and General Genetics MGG Aims and scope Submit manuscript

Summary

Several cDNA clones encoding the “33 kDa” protein associated with the photosynthetic water oxidation activity of spinach were sequenced. A 1208 bp insert of one of the clones encodes the entire 331 amino acid residues of the precursor protein including 84 amino acids (8.5 kDa) of the amino-terminal transit peptide, 49 bp of the 5′ and 111 bp of the 3′ untranslated segment of the mRNA. The 3′ poly(A) tail starts 19 bp downstream from a putative polyadenylation signal, TATAAA. The hydrophilic mature protein consists of 247 amino acid residues corresponding to an Mr of 26.5 kDa, which is 6.5 kDa smaller than the value determined by SDS-polyacrylamide gel electrophoresis (33–34 kDa), and shows a certain degree of conservation with the putative Mn-complexing active sites of bacterial Mn-dependent superoxide dismutases. The anatomy of the unusually long transit sequence is discussed with regard to current concepts of protein import into and protein routein within the organelle.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Åkerlund H-E, Jansson C (1981) Localization of a 34 000 and a 23 000 Mr polypeptide to the lumenal side of the thylakoid membrane. FEBS Lett 124:229–232

    Google Scholar 

  • Andersson B (1986) Proteins participating in photosynthetic water oxidation. Encycl Plant Physiol 19:447–456

    Google Scholar 

  • Brook CJ, Walker JE (1980) Superoxide dismutase from Bacillus stearothermophilus: complete amino acid sequence of a manganese enzyme. Biochemistry 19:2873–2882

    Google Scholar 

  • Cashmore AR (1984) Structure and expression of a pea nuclear gene encoding a chlorophyll a/b-binding polypeptide. Proc. Natl Acad Sci USA 81:2960–2964

    Google Scholar 

  • Cashmore A, Szabo L, Timko M, Kausch A, Van de Broeck G, Schreier P, Bohnert H, Herrera-Estrella L, Van Montagu M, Schell J (1985) Import of polypeptides into chloroplasts. Bio/Technology 3:803–808

    Google Scholar 

  • Chou PY, Fasman GD (1978) Prediction of the secondary structure of proteins from their amino acid sequence. Adv Enzymol 47:45–148

    Google Scholar 

  • Chua N-H, Schmidt GW (1979) Transport of proteins into mitochondria and chloroplasts. J Cell Biol 81:461–483

    Google Scholar 

  • Cline K, Werner-Washburne M, Lubben TH, Keegstra K (1985) Precursors to two nuclear-encoded chloroplast proteins bind to the outer envelope membrane before being imported into chloroplasts. J Biol Chem 260:3691–3696

    Google Scholar 

  • Coruzzi G, Broglie R, Cashmore A, Chua N-H (1983) Nucleotide sequences of two pea cDNA clones encoding the small subunit of ribulose 1.5-bisphosphate carboxylase and the major chlorophyll a/b-binding thylakoid polypeptide. J Biol Chem 258:1399–1402

    Google Scholar 

  • Cozens AL, Walker JE, Phillips AL, Huttly AK, Gray JC (1986) A sixth subunit of ATP synthase, an F component, is encoded in the pea choroplast genome. EMBO J 5:217–222

    Google Scholar 

  • Dean C, Tamaki S, Dunsmuir P, Fareau M, Katayama C, Dooner H, Bedbrook J (1986) mRNA transcripts of several plant genes are polyadenylated at multiple sites in vivo. Nucleic Acids Res 13:3179–3194

    Google Scholar 

  • Dunsmuir P, Smith SM, Bedbrook J (1983) The major chlorophyll a/b binding protein of petunia is composed of several polypeptides encoded by a number of distinct nuclear genes. J Mol Appl Genet 2:285–300

    Google Scholar 

  • Garnier J, Osguthorpe DJ, Robson B (1978) Analysis of the accuracy and implications of simple methods for predicting the secondary structure of globular proteins. J Mol Biol 120:97–120

    Google Scholar 

  • Grossman AR, Bartlett S, Schmidt GW, Mullet JE, Chua N-H (1982) Optimal conditions for post-translational untake of proteins by isolated chloroplasts. J Biol Chem 257:1558–1563

    Google Scholar 

  • Hennig J, Herrmann RG (1986) Chloroplast ATP synthase of spinach contains nine nonidentical subunit species, six of which are encoded by plastid chromosomes in two operons in a phylogenetically conserved arrangement. Mol Gen Genet 203:117–128

    Google Scholar 

  • Hernández-Lucas C, Royo J, Paz-Ares J, Ponz F, Garcia-Olmedo F, Carbonero P (1986) Polyadenylation site heterogeneity in mRNA encoding the precursor of the barley-toxin β-hordothionin. FEBS Lett 200:103–106

    Google Scholar 

  • Herrmann RG, Westhoff P, Alt J, Winter P, Tittgen J, Bisanz C, Sears BB, Nelson N, Hurt E, Hauska G, Viebrock A, Sebald W (1983) Identification and characterization of genes for polypeptides of the thylakoid membrane. In: Cifferi O, Dure III (eds) Structure and function of plant genomes. Plenum Publ, New York, pp 143–154

    Google Scholar 

  • Herrmann RG, Westhoff P, Alt J, Tittgen J, Nelson N (1985) Thylakoid membrane proteins and their genes. In: van Vloten-Doting L, Groot GSP, Hall TC (eds) Molecular form and function of the plant genome. Plenum Publ, New York, pp 233–256

    Google Scholar 

  • Hurt EC, von Loon APGM (1986) How proteins find mitochondria and intramitochondrial compartments. Trends Biochem Sci 11:204–207

    Google Scholar 

  • Jansen T, Rother Ch, Steppuhn J, Reinke H, Beyreuther K, Jansson C, Andersson B, Herrmann RG (1987) Nucleotide sequence of cDNA clones encoding the complete “23 kd” and “16 kd” precursor proteins associated with the photosynthetic oxygen-evolving complex from spinach. FEBS Lett (in press)

  • Karlin-Neumann GA, Tobin EM (1986) Transit peptides of nuclear-encoded chloroplast protein share a common amino acid framework. EMBO J 5:9–13

    Google Scholar 

  • Karlin-Neumann GA, Kohorn BD, Thornber JP, Tobin EM (1985) A chlorophyll a/b-protein encoded by a gene containing an intron with characteristics of a transposable element. J Mol Appl Genet 3:45–61

    Google Scholar 

  • Kirsch W, Seyer P, Herrmann RG (1986) Nucleotide sequence of the clustered genes for two P700 chlorophyll a apoproteins of the photosystem I reaction center and the ribosomal protein S14 of the spinach plastid chromosome. Curr Genet 10:843–855

    Google Scholar 

  • Kohorn BD, Harel E, Chitnis PR, Thornber P, Tobin EM (1986) Functional and mutational analysis of the light-harvesting chlorophyll a/b protein of thylakoid membranes. J Cell Biol 102:972–981

    Google Scholar 

  • Kozak M (1986) Point mutations define a sequence flanking the AUG initiator codon that modulates translation by eukaryotic ribosomes. Cell 44:283–292

    Google Scholar 

  • Kröger M, Kröger-Block A (1982) A flexible new computer program for handling DNA sequence data. Nucleic Acids Res 10:229–236

    Google Scholar 

  • Kuwabara T, Murata N (1982) Inactivation of photosynthetic oxygen evolution and concomitant release of three polypeptides in the photosystem II particles of spinach chloroplasts. Plant Cell Physiol 23:533–539

    Google Scholar 

  • Kyte J, Doolittle RF (1982) A simple method for displaying the hydropathic character of a protein. J Mol Biol 157:105–132

    Google Scholar 

  • Ljungberg U, Åkerlund H-E, Andersson B (1986) Isolation and characterization of the 10-kDa and 22-kDa polypeptides of higher plant photosystem 2. Eur. J. Biochem 158:477–482

    Google Scholar 

  • Marres CA, van Loon APGM, Oudshoorn P, van Steeg H, Grivell LA, Slater EC (1985) Nucleotide sequence analysis of the nuclear gene coding for manganese superoxide dismutase of yeast mitochondria, a gene previously assumed to code for the Rieske iron-sulphur protein. Eur J Biochem 147:153–161

    Google Scholar 

  • Maxam AM, Gilbert W (1980) Sequencing end-labelled DNA with base-specific chemical cleavages. Methods Enzymol 64:499–560

    Google Scholar 

  • Melton DA, Krieg PA, Rebagliati MR, Maniatis T, Zinn K, Green MR (1984) Efficient in vitro synthesis of biologically active RNA and RNA hybridization probes from plasmids containing a bacteriophage SP6 promotor. Nucleic Acids Res 12:7035–7056

    Google Scholar 

  • Miyao M, Murata N (1987) Oxygen evolving complex of photosystem II and photoinactivation. Topics in Photosynthesis 9 (in press)

  • Oh-Oka H, Tanaka S, Wada K, Kuwabara T, Murata N (1986) Complete amino acid sequence of 33 kDa protein isolated from spinach photosystem II particles. FEBS Lett 197:63–66

    Google Scholar 

  • Pfanner N, Neupert W (1986) Biogenesis of mitochondrial energy-transducing complexes. Curr Top Bioenerget 15 (in press)

  • Robinson C, Ellis RJ (1984) Transport of proteins into chloroplasts, partial purification of a chloroplast protease involved in the processing of imported precursor polypeptides. Eur J Biochem 142:337–342

    Google Scholar 

  • Rother C, Jansen T, Tyagi A, Tittgen J, Herrmann RG (1986) Plastocynin is encoded by an uninterrupted nuclear gene in spinach. Curr Genet 11:171–176

    Google Scholar 

  • Smeekens S, van Binsbergen J, Weisbeek P (1985a) The plant ferredoxin precursor: nucleotide sequence of a full length cDNA clone. Nucleic Acids Res 13:3179–3194

    Google Scholar 

  • Smeekens S, de Groot M, van Binsbergen J, Weisbeek P (1985b) Sequence of the precursor of the chloroplast thylakoid lumen protein plastocyanin. Nature 317:456–458

    Google Scholar 

  • Smeekens S, Bauerle C, Hageman J, Keegstra K, Weisbeek P (1986) The role of the transit peptide in the routing of precursors toward different chloroplast compartments. Cell 46:356–375

    Google Scholar 

  • Steinmann HM (1978) The amino acid sequence of mangano superoxide dismutase from Escherichia coli B. J Biol Chem 253:8708–8720

    Google Scholar 

  • Steinmetz AA, Castroviejo M, Sayre RT, Bogorad L (1986) An additional component of photosystem II identified through its plastid gene in maize. J Biol Chem 261:2485–2488

    Google Scholar 

  • Tittgen J, Hermans J, Steppuhn J, Jansen T, Jansson C, Andersson B, Nechushtai R, Nelson N, Hermann RG (1986) Isolation of cDNA clones for fourteen nuclear-ended thylakoid membrane proteins. Mol Gen Genet 204:258–265

    Google Scholar 

  • Vater J, Salnikow J, Jansson C (1986) N-terminal sequence determination and secondary structure analysis of extrinsic membrane proteins in the water splitting complex of spinach. FEBS Lett 203:230–234

    Google Scholar 

  • Von Heijne G (1986a) A new method for predicting signal sequence cleavage sites. Nucleic Acids Res 14:4683–4690

    Google Scholar 

  • Von Heijne G (1986b) Towards a comparative anatomy of N-terminal topogenic protein sequences. J Mol Biol 189:239–242

    Google Scholar 

  • Westhoff P, Jansson C, Klein-Hitpaß L, Berzborn R, Larsson C, Bartlett SG (1985) Intracellular coding sites of polypeptides associated with photosynthetic oxygen evolution of photosystem II. Plant Mol Biol 4:137–146

    Google Scholar 

  • Westhoff P, Farchaus T, Herrmann RG (1986) The gene for the Mr 10 000 phosphoprotein associated with photosystem II is part of the psbB operon of the spinach plastid chromosome. Curr Genet 11:165–169

    Google Scholar 

  • Young RA, Davis RW (1983) Efficient isolation of genes by using antibody probes. Proc Natl Acad Sci USA 80:1194–1198

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Additional information

Communicated by C.P. Hollenberg

Rights and permissions

Reprints and permissions

About this article

Cite this article

Tyagi, A., Hermans, J., Steppuhn, J. et al. Nucleotide sequence of cDNA clones encoding the complete “33 kDa” precursor protein associated with the photosynthetic oxygen-evolving complex from spinach. Mol Gen Genet 207, 288–293 (1987). https://doi.org/10.1007/BF00331591

Download citation

  • Received:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00331591

Key words

Navigation