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Stability of cloned promoter-containing fragments

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Summary

Strong bacteriophages λ and T7 promoters for Escherichia coli RNA polymerase were cloned in a multicopy plasmid. To achieve this result, two variants of the promoter-probe vectors were constructed. It was found that (i) modifications of the nucleotide sequence, apart from the commonly accepted promoter region, both upstream and downstream of the RNA initiation point greatly influenced the efficiency of promoters in vivo, (ii) a recombinant DNA composed of one of the promoter-probe plasmids and a tandem of A1, A2, and A3 promoters of T7 bacteriophage DNA induced a reproducible secondary change in plasmid DNA upon cloning. This change was substitution of the part of the recombinant that originated as T7 by a large portion of the host DNA.

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References

  • Axelrod VD, Vartikyan RM, Aivasashvili VA, Beabealashvilli RSh (1978) Specific termination of RNA polymerase synthesis as a method of RNA and DNA sequencing. Nucleic Acids Res 85:3549–3563

    Google Scholar 

  • Backman K, Ptashne M, Gilbert W (1976) Construction of plasmids carrying the cI gene of bacteriophage λ. Proc Natl Acad Sci USA 73:4174–4178

    Google Scholar 

  • Beabealashvilli RSh, Savochkina LP (1971) Distribution of RNA polymerase and its complex with DNA in the biphase dextranpolyethylene glycol system. Mol Biol (Russian) 5:252–258

    Google Scholar 

  • Calos MP, Miller JH (1980) Transposable elements. Cell 20:579–595

    Google Scholar 

  • Dunn JJ, Studier FW (1981) Nucleotide sequence from the genetic left end of bacteriophage T7 DNA to the beginning of gene 4. J Mol Biol 148:303–330

    Google Scholar 

  • Gentz R, Langner A, Chang ACY, Cohen SN, Bujard H (1981) Cloning and analysis of strong promoters is made possible by the downstream placement of RNA termination signal. Proc Natl Acad Sci USA 78:4936–4940

    Google Scholar 

  • Ineichen K, Shepherd JCW, Bickle TA (1981) The DNA sequence of the phage λ genome between PL and the gene bet. Nucleic Acids Res 9:4639–4653

    Google Scholar 

  • Korobko VG, Dobrynin VN, Chuvpilo SA, Severtsova IV, Shingarova LN, Kolosov MN (1981) A plasmid vector for cloning of promoters. Bioorgan Khimiya (Russian) 7:309–312

    Google Scholar 

  • Kramer RA, Rosenberg M, Steitz JA (1974) Nucleotide sequences of the 5′ and 3′ termini of bacteriophage T7 early messenger RNAs synthesised in vivo: Evidence for sequence specificity in RNA processing. J Mol Biol 89:767–776

    Google Scholar 

  • Maxam A, Gilbert W (1980) Sequencing end-labeled DNA with basespecific chemical cleavages. In: Grossman L, Moldave K (eds) Methods in enzymology, vol 65. Academic Press, New York, p 499

    Google Scholar 

  • Miller JH (1972) Experiments in molecular genetics. Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, p 46

    Google Scholar 

  • Radding CM (1978) Genetic recombination: Strand transfer and mismatch repair. Ann Rev Biochem 47:847–880

    Google Scholar 

  • Retchinsky VO, Savotchkina LP, Beabealashvilli RSh (1981) Construction of promoter-probe plasmid vector. Mol Biol (Russian) 15:950–955

    Google Scholar 

  • Rubin CM, Schmidt CW (1980) Pyrimidine-specific chemical reaction useful for DNA sequencing. Nucleic Acids Res 8:4613–4619

    Google Scholar 

  • Sutcliffe JG (1978) Complete nucleotide sequence of the Escherichia coli plasmid pBR322. Cold Spring Harbor Symp Quant Biol 43:77–90

    Google Scholar 

  • Szybalski EH, Szybalski W (1979) A comprehensive molecular map of bacteriophage lambda. Gene 7:217–270

    Google Scholar 

  • West RW Jr, McConnell D, Rodriguez RL (1980) Isolation of E. coli promoters from the late region of bacteriophage T7 DNA. Mol Gen Genet 180:439–447

    Google Scholar 

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Communicated by David Goldfarb

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Savochkina, L.P., Retchinsky, V.O. & Beabealashvilli, R.S. Stability of cloned promoter-containing fragments. Molec Gen Genet 189, 142–147 (1983). https://doi.org/10.1007/BF00326067

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  • DOI: https://doi.org/10.1007/BF00326067

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