Abstract
Uroporphyrinogen decarboxylase (Uro-d; EC 4.1.1.37), the fifth enzyme in the heme biosynthetic pathway, which catalyzes the sequential decarboxylation of uroporphyrinogen to coproporphyrinogen, is encoded by the HEM12 gene in Saccharomyces cerevisiae. The HEM12 gene is transcribed into a major short mRNA and a minor longer one, approximately 1.35 and 1.55 kb, respectively, in size, and that differ in the 5′ untranslated region. “Uroporphyric” mutants, which have no mutations in the HEM12 gene but accumulate uroporphyrinogen, a phenotype chracteristic of partial Uro-d deficiency, were investigated. Genetic analysis showed that the mutant phenotype depends on the combined action of two unlinked mutations, udt1 and either ipa1, ipa2, or ipa3. ipa1 is tightly linked to HEM12 The mutation udt1 apparently acts specifically on the HEM12 gene, and causes a six to tenfold decrease in the levels of the short HEM12 mRNA, in the β-galactosidase activity of a HEM12-lacZ fusion, in immunodetectable protein and enzyme activity. But heme synthesis is normal and porphyrin accumulation was modest. The mutations ipa1, ipa2, and ipa3 had no phenotype on their own, but they caused an increase in porphyrin accumulation in a udt1 background. This multiplicity of genetic factors leading to uroporphyric yeast cells closely resembles the situation in human porphyria cutanea tarda.
Similar content being viewed by others
References
Bilinski T, Litwinska J, Sledziewski A, Rytka J (1980) Hemoprotein formation in yeast. VII. Genetic analysis of pleiotropic mutants affected in the response to glucose repression and anoxia. Acta Microbiol Polonica 29:199–212
Chelstowska A, Żołądek T, Garey J, Kushner J, Rytka J, Labbe-Bois R (1992) Identification of amino acid changes affecting yeast uroporphyrinogen decarboxylase activity by sequence analysis of hem12 mutant alleles. Biochem J 288:753–757
Cigan AM, Donahue TF (1987) Sequence and structural features associated with translational initiator regions in yeast — a review. Gene 59:1–18
De Verneuil H, Sassa S, Kappas A (1983) Purification and properties of uroporphyrinogen decarboxylase from human erythrocytes. A single enzyme catalyzing the four sequential decarboxylations of uroporphyrinogens I and III. J Biol Chem 258:2454–2460
De Verneuil H, Bourgeois F, de Rooij F, Siersema PD, Wilson JHP, Grandchamp B, Nordmann Y (1992) Characterization of a new mutation (R292G) and a deletion at the human uroporphyrinogen decarboxylase locus in two patients with hepatoerythropoietic pophyria. Hum Genet 89:548–552
Diflumeri C, Larocque R, Keng T (1993) Molecular analysis of HEM6 (HEM12) in Saccharomyces cerevisiae, the gene for uroporphyrinogen decarboxylase. Yeast 9:613–623
Elder GH, Tovey JA, Sheppard DM (1983) Purification of uroporphyrinogen decarboxylase from human erythrocytes. Immunochemical evidence for a single protein with decarboxylase activity in human erythrocytes and liver. Biochem J 215:45–55
Felix F, Brouillet N (1990) Purification and properties of uroporphyrinogen decarboxylase from Saccharomyces cerevisiae. Eur J Biochem 188:393–403
Fujita H, Yamamoto M, Yamagami T, Hayashi N, Bishop TR, De Verneuil H, Yoshinaga T, Shibahara S, Morimoto R, Sassa S (1991) Sequential activation of genes for heme pathway enzymes during erythroid differentiation of mouse Friend virustransformed erythroleukemia cells. Biochim Biophys Acta 1090:311–316
Garey JR, Labbe-Bois R, Chelstowska A, Rytka J, Harrison L, Kushner J, Labbe P (1992) Uroporphyrinogen decarboxylase in Saccharomyces cerevisiae. HEM12 gene sequence and evidence for two conserved glycines essential for enzymatic activity. Eur J Biochem 205:1011–1016
Garey JR, Franklin KF, Brown DA, Harrison LM, Metcalf KM, Kushner JP (1993) Analysis of uroporphyrinogen decarboxylase complementary DNAs in sporadic porphyria cutanea tarda. Gastroenterology 105:165–169
Goebl MG, Yochem J, Jentsch S, McGrath JP, Varshavsky A, Byers B (1988) The yeast cell cycle CDC34 encodes a ubiquitin-conjugating enzyme. Science 241:1331–1335
Grandchamp B, Beaumont C, De Verneuil H, Nordmann Y (1985) Accumulation of porphobilinogen deaminase, uroporphyrinogen decarboxylase and alpha and beta globin mRNA during differentiation of erythroleukemia cells. J Biol Chem 260:9630–9635
Guarente L (1983) Yeast promoters and lacZ fusions designed to study expression of cloned genes in yeast. Methods Enzymol 101:181–191
Hill JE, Myers AM, Koerner TJ, Tzagoloff A (1986) Yeast/E. coli shuttle vectors with multiple unique restriction sites. Yeast 2:163–167
Ito H, Fukuda Y, Murata K, Kimura A (1983) Transformation of intact yeast cells treated with alkali cations. J Bacteriol 153:163–168
Kawasaki ES (1990) Amplification of RNA. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ (eds) PCR protocols: a guide to methods and applications. Academic Press, New York, pp 21–27
Keng T, Guarente L (1987) Constitutive expression of the yeast HEM1 gene is actually a composite of activation and repression. Proc Natl Acad Sci USA 84:9113–9117
Keng T, Richard C, Larocque R (1992) Structure and regulation of yeast HEM3, the gene for porphobilinogen deaminase. Mol Gen Genet 234:233–243
Kurlandzka A, Rytka J (1985) Mutants of Saccharomyces cerevisiae partially defective in the last steps of the haem biosynthetic pathway: isolation and genetical characterization. J Gen Microbiol 131:2909–2918
Kurlandzka A, Żołądek T, Rytka J, Labbe-Bois R, Urban-Grimal D (1988) The effects in vivo of mutationally modified uroporphyrinogen decarboxylase in different hem12 mutants of baker's yeast (Saccharomyces cerevisiae). Biochem J 253:109–116
Labbe-Bois R, Labbe P (1990) Tetrapyrrole and heme biosynthesis in the yeast Saccharomyces cerevisiae. In: Dailey HA (ed) Biosynthesis of heme and chlorophylls. McGraw-Hill, New York, pp 235–285
Labbe-Bois R, Brouillet N, Camadro JM, Chambon H, Felix F, Labbe P, Rytka J, Simon-Casteras M, Urban-Grimal D, Volland C, Zagorec M (1986) Molecular approaches to heme biosynthesis in the yeast Saccharomyces cerevisiae. In: Nordmann Y (ed) Porphyrins and porphyria. Colloque INSERM, John Libbey Eurotext, 134:15–24
Lambrecht RW, Jacobs JM, Sinclair PR, Sinclair JF (1990) Inhibition of uroporphyrinogen decarboxylase activity. The role of cytochrome P-450-mediated uroporphyrinogen oxidation. Biochem J 269:437–441
Myers AM, Tzagoloff A, Kinney DM, Lusty CJ (1986) Yeast shuttle and integrative vectors with multiple cloning sites suitable for construction of lacZ fusions. Gene 45:299–310
Nordmann Y, Deybach JC (1990) Human hereditary porphyria. In: Dailey H (ed) Biosynthesis of heme and chlorophylls. McGraw-Hill, New York, pp 491–542
Romeo PH, Raich N, Dubart A, Beaupain D, Pryor M, Kushner J, Cohen-Solal M, Goossens M (1986) Molecular cloning and nucleotide sequence of a complete human uroporphyrinogen decarboxylase cDNA. J Biol Chem 261:9825–9831
Rothstein RJ (1983) One-step gene disruption in yeast. Methods Enzymol 101:202–211
Russo P, Li WZ, Hampsey DM, Zaret KS, Sherman F (1991) Distinct cis-acting signals enhance 3′ endpoint formation of CYC1 mRNA in the yeast Saccharomyces cerevisiae. EMBO J 10:563–571
Rytka J, Bilinski T, Labbe-Bois R (1984) Modified uroporphyrinogen decarboxylase activity in a yeast mutant which mimics porphyria cutanea tarda. Biochem J 218:405–413
Sadhale PP, Sapolsky R, Davis RW, Butler JS, Platt T (1991) Polymerase chain reaction mapping of yeast GAL7 mRNA polyadenylation sites demonstrates that 3′ end processing in vitro faithfully reproduces the 3′ ends observed in vivo. Nucleic Acids Res 19:3683–3688
Sambrook J, Fritsch EF, Maniatis T (1989) Molecular cloning: a laboratory manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York
Schmitt ME, Brown TA, Trumpower BL (1990) A rapid and simple method for preparation of RNA from Saccharomyces cerevisiae. Nucleic Acids Res 18:3091–3092
Sherman F, Fink GR, Hicks JB (1986) Laboratory course manual for methods in yeast genetics. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York
Sinclair PR, Bement WJ, Lambrecht RW, Gorman N, Sinclair JF (1990) Chlorinated biphenyls induce cytochrome P450IA2 and uroporphyrin accumulation in cultures of mouse hepatocytes. Arch Biochem Biophys 281:225–232
Smith AG, Francis JE (1993) Genetic variation of iron-induced uroporphyria in mice. Biochem J 291:29–35
Sweeney GD (1986) Porphyria cutanea tarda, or the uroporphyrinogen decarboxylase defiency diseases. Clin Biochem 19:315
Van Gelder W, Siersema PD, Voogd A, de Jeu-Jaspars NCM, van Eijk HG, Koster JF, de Rooy FWM, Wilson JHP (1993) The effect of desferrioxamine on iron metabolism and lipid peroxidation in hepatocytes of C57BL/10 mice in experimental uroporphyria. Biochem Pharmacol 46:221–228
Zagorec M, Buhler JM, Treich I, Keng T, Guarente L, Labbe-Bois R (1988) Isolation, sequence, and regulation by oxygen of the yeast HEM13 gene coding for coproporphyrinogen oxidase. J Biol Chem 263:9718–9724
Zaret KS, Sherman F (1982) DNA sequences required for efficient transcription termination in yeast. Cell 28:563–573
Author information
Authors and Affiliations
Additional information
Communicated by D. Y. Thomas
Rights and permissions
About this article
Cite this article
Żołądek, T., Chełstowska, A., Labbe-Bois, R. et al. Isolation and characterization of extragenic mutations affecting the expression of the uroporphyrinogen decarboxylase gene (HEM12) in Sacharomyces cerevisiae . Molec. Gen. Genet. 247, 471–481 (1995). https://doi.org/10.1007/BF00293149
Received:
Accepted:
Issue Date:
DOI: https://doi.org/10.1007/BF00293149